RNA–Protein interactions for RNA: YFL038C

YPT1, Transcript of Rab family GTPase, yeastyeast

Gene YPT1, Length 621 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT1YFL038C UPS2P35200 230 aa5.57□□□□□ -1.52
YPT1YFL038C UBS1P38290 277 aa5.57□□□□□ -1.52
YPT1YFL038C TRS20P38334 175 aa5.57□□□□□ -1.52
YPT1YFL038C YPT31P38555 223 aaKnown RBP5.57□□□□□ -1.52
YPT1YFL038C BNS1P50084 137 aa5.57□□□□□ -1.52
YPT1YFL038C TEX1P53851 422 aaKnown RBP5.57□□□□□ -1.52
YPT1YFL038C ATG4P53867 494 aa5.57□□□□□ -1.52
YPT1YFL038C TSA2Q04120 196 aa5.57□□□□□ -1.52
YPT1YFL038C FSH2Q05015 223 aa5.57□□□□□ -1.52
YPT1YFL038C YPR098CQ06089 161 aa5.57□□□□□ -1.52
YPT1YFL038C CTR3Q06686 241 aa5.57□□□□□ -1.52
YPT1YFL038C PRP11Q07350 266 aaPredicted RBP5.57□□□□□ -1.52
YPT1YFL038C YOR292CQ08743 309 aa5.57□□□□□ -1.52
YPT1YFL038C NCE102Q12207 173 aaRIP-Chip data5.57□□□□□ -1.52not detected
YPT1YFL038C ATG40Q99325 256 aa5.57□□□□□ -1.52
YPT1YFL038C Q0144Q9ZZW2 109 aa5.57□□□□□ -1.52
YPT1YFL038C BLM10P43583 2143 aa5.57□□□□□ -1.52
YPT1YFL038C RPL7AP05737 244 aaKnown RBP5.56□□□□□ -1.52
YPT1YFL038C WSS1P38838 269 aa5.56□□□□□ -1.52
YPT1YFL038C MTC6P38849 526 aa5.56□□□□□ -1.52
YPT1YFL038C RMD6P39975 231 aa5.56□□□□□ -1.52
YPT1YFL038C LSM8P47093 109 aaKnown RBP5.56□□□□□ -1.52
YPT1YFL038C MGA1P53050 456 aa5.56□□□□□ -1.52
YPT1YFL038C YIP5P53108 310 aa5.56□□□□□ -1.52
YPT1YFL038C PAU4P53427 120 aa5.56□□□□□ -1.52
YPT1YFL038C PDR17P53844 350 aa5.56□□□□□ -1.52
YPT1YFL038C ELA1P53861 379 aaPredicted RBP5.56□□□□□ -1.52
YPT1YFL038C RSM10Q03201 203 aa5.56□□□□□ -1.52
YPT1YFL038C RCE1Q03530 315 aa5.56□□□□□ -1.52
YPT1YFL038C DPB4Q04603 196 aaKnown RBP5.56□□□□□ -1.52
YPT1YFL038C UPS1Q05776 175 aa5.56□□□□□ -1.52
YPT1YFL038C FCY22Q12119 530 aa5.56□□□□□ -1.52
YPT1YFL038C RPL7BQ12213 244 aaKnown RBP5.56□□□□□ -1.52
YPT1YFL038C DGK1Q12382 290 aa5.56□□□□□ -1.52
YPT1YFL038C YOR192C-CQ3E736 78 aa5.56□□□□□ -1.52
YPT1YFL038C YBR255C-AQ3E776 120 aa5.56□□□□□ -1.52
YPT1YFL038C POP5P28005 173 aa5.55□□□□□ -1.52
YPT1YFL038C AHT1P29589 182 aa5.55□□□□□ -1.52
YPT1YFL038C MRPS5P33759 307 aa5.55□□□□□ -1.52
YPT1YFL038C RPL14AP36105 138 aaKnown RBP5.55□□□□□ -1.52
YPT1YFL038C MRPS9P38120 278 aa5.55□□□□□ -1.52
YPT1YFL038C RPL14BP38754 138 aaKnown RBP5.55□□□□□ -1.52
YPT1YFL038C EGT2P42835 1041 aa5.55□□□□□ -1.52
YPT1YFL038C PUS4P48567 403 aaKnown RBP5.55□□□□□ -1.52
YPT1YFL038C CGR1P53188 120 aa5.55□□□□□ -1.52
YPT1YFL038C HRD1Q08109 551 aa5.55□□□□□ -1.52
YPT1YFL038C YOL118CQ08259 102 aa5.55□□□□□ -1.52
YPT1YFL038C RRS1Q08746 203 aaKnown RBP5.55□□□□□ -1.52
YPT1YFL038C YPR063CQ12160 140 aa5.55□□□□□ -1.52
YPT1YFL038C LSO2Q3E772 92 aaKnown RBP5.55□□□□□ -1.52
YPT1YFL038C ACC1Q00955 2233 aaKnown RBP5.55□□□□□ -1.52
YPT1YFL038C CDC39P25655 2108 aaKnown RBP5.54□□□□□ -1.52
YPT1YFL038C PAU1P0CE88 120 aa5.54□□□□□ -1.52
YPT1YFL038C PAU14P0CE89 120 aa5.54□□□□□ -1.52
YPT1YFL038C PAU6P0CE90 120 aa5.54□□□□□ -1.52
YPT1YFL038C PAU18P0CE91 120 aa5.54□□□□□ -1.52
YPT1YFL038C PAU8P0CE92 120 aa5.54□□□□□ -1.52
YPT1YFL038C PAU11P0CE93 120 aa5.54□□□□□ -1.52
YPT1YFL038C LSB5P25369 354 aa5.54□□□□□ -1.52
YPT1YFL038C YBR013CP38215 129 aa5.54□□□□□ -1.52
YPT1YFL038C CDS1P38221 457 aa5.54□□□□□ -1.52
YPT1YFL038C PAU13P38725 120 aa5.54□□□□□ -1.52
YPT1YFL038C YER084WP40057 128 aa5.54□□□□□ -1.52
YPT1YFL038C PIG2P40187 538 aa5.54□□□□□ -1.52
YPT1YFL038C FLX1P40464 311 aa5.54□□□□□ -1.52
YPT1YFL038C TAF4P50105 388 aa5.54□□□□□ -1.52
YPT1YFL038C YNR040WP53736 256 aa5.54□□□□□ -1.52
YPT1YFL038C PAU10Q03050 120 aa5.54□□□□□ -1.52
YPT1YFL038C RIM9Q04734 239 aa5.54□□□□□ -1.52
YPT1YFL038C PAU20Q08322 120 aa5.54□□□□□ -1.52
YPT1YFL038C FIT3Q08907 204 aa5.54□□□□□ -1.52
YPT1YFL038C RAD28Q12021 506 aa5.54□□□□□ -1.52
YPT1YFL038C ATG5Q12380 294 aa5.54□□□□□ -1.52
YPT1YFL038C PAU9Q3E770 120 aa5.54□□□□□ -1.52
YPT1YFL038C SEC16P48415 2195 aaKnown RBP5.53□□□□□ -1.52
YPT1YFL038C STE4P18851 423 aa5.53□□□□□ -1.52
YPT1YFL038C RPB10P22139 70 aa5.53□□□□□ -1.52
YPT1YFL038C ATG15P25641 520 aa5.53□□□□□ -1.52
YPT1YFL038C CDC50P25656 391 aa5.53□□□□□ -1.52
YPT1YFL038C AVT5P38176 459 aa5.53□□□□□ -1.52
YPT1YFL038C SEN34P39707 275 aa5.53□□□□□ -1.52
YPT1YFL038C PHB1P40961 287 aa5.53□□□□□ -1.52
YPT1YFL038C RIB4P50861 169 aaPredicted RBP5.53□□□□□ -1.52
YPT1YFL038C SMM1P53720 384 aaKnown RBP5.53□□□□□ -1.52
YPT1YFL038C ALG12P53730 551 aa5.53□□□□□ -1.52
YPT1YFL038C YDC1Q02896 317 aa5.53□□□□□ -1.52
YPT1YFL038C AVO2Q04749 426 aa5.53□□□□□ -1.52
YPT1YFL038C RAF1Q06891 181 aa5.53□□□□□ -1.52
YPT1YFL038C SWT1Q12104 458 aa5.53□□□□□ -1.52
YPT1YFL038C SME1Q12330 94 aaPredicted RBP5.53□□□□□ -1.52
YPT1YFL038C QCR9P22289 66 aa5.52□□□□□ -1.53
YPT1YFL038C SPO13P23624 291 aa5.52□□□□□ -1.53
YPT1YFL038C ELO2P25358 347 aa5.52□□□□□ -1.53
YPT1YFL038C DAL3P32459 195 aa5.52□□□□□ -1.53
YPT1YFL038C ACP1P32463 125 aa5.52□□□□□ -1.53
YPT1YFL038C YKL107WP34251 309 aa5.52□□□□□ -1.53
YPT1YFL038C SHB17P36136 271 aaKnown RBP5.52□□□□□ -1.53
YPT1YFL038C IMD2P38697 523 aaKnown RBP5.52□□□□□ -1.53
YPT1YFL038C COX15P40086 486 aa5.52□□□□□ -1.53
YPT1YFL038C YGR269WP40326 108 aa5.52□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 183.5 ms