RNA–Protein interactions for RNA: YER150W

SPI1, Transcript of GPI-anchored cell wall protein involved in weak acid resistance, yeast

Gene SPI1, Length 447 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPI1	YER150W	AGA1	P32323	725 aa		3.36	□□□□□ -1.87
SPI1	YER150W	SRP21	P32342	167 aa		3.36	□□□□□ -1.87
SPI1	YER150W	COQ2	P32378	372 aa		3.36	□□□□□ -1.87
SPI1	YER150W	SIP2	P34164	415 aa	Known RBP	3.36	□□□□□ -1.87
SPI1	YER150W	GPX1	P36014	167 aa		3.36	□□□□□ -1.87
SPI1	YER150W	YBR063C	P38083	404 aa		3.36	□□□□□ -1.87
SPI1	YER150W	YEA6	P39953	335 aa		3.36	□□□□□ -1.87
SPI1	YER150W	SFT1	P43682	97 aa		3.36	□□□□□ -1.87
SPI1	YER150W	YGL082W	P53155	381 aa		3.36	□□□□□ -1.87
SPI1	YER150W	ERV29	P53337	310 aa		3.36	□□□□□ -1.87
SPI1	YER150W	AAH1	P53909	347 aa		3.36	□□□□□ -1.87
SPI1	YER150W	APJ1	P53940	528 aa		3.36	□□□□□ -1.87
SPI1	YER150W	DAD3	P69850	94 aa		3.36	□□□□□ -1.87
SPI1	YER150W	VHS1	Q03785	461 aa		3.36	□□□□□ -1.87
SPI1	YER150W	SPC3	Q12133	184 aa		3.36	□□□□□ -1.87
SPI1	YER150W	YDL177C	Q12257	170 aa		3.36	□□□□□ -1.87
SPI1	YER150W	YLR462W	O13556	202 aa		3.35	□□□□□ -1.87
SPI1	YER150W	CKS1	P20486	150 aa	Known RBP	3.35	□□□□□ -1.87
SPI1	YER150W	URA10	P30402	227 aa		3.35	□□□□□ -1.87
SPI1	YER150W	SHB17	P36136	271 aa	Known RBP	3.35	□□□□□ -1.87
SPI1	YER150W	CSH1	P38287	376 aa		3.35	□□□□□ -1.87
SPI1	YER150W	AVT7	P40501	490 aa		3.35	□□□□□ -1.87
SPI1	YER150W	CAT5	P41735	233 aa		3.35	□□□□□ -1.87
SPI1	YER150W	RRT5	P43607	289 aa		3.35	□□□□□ -1.87
SPI1	YER150W	GPI2	P46961	280 aa		3.35	□□□□□ -1.87
SPI1	YER150W	ARP3	P47117	449 aa	Known RBP	3.35	□□□□□ -1.87
SPI1	YER150W	COS10	P52924	374 aa		3.35	□□□□□ -1.87
SPI1	YER150W	YGL088W	P53151	121 aa		3.35	□□□□□ -1.87
SPI1	YER150W	TPC1	P53257	314 aa		3.35	□□□□□ -1.87
SPI1	YER150W	RSM27	P53305	110 aa		3.35	□□□□□ -1.87
SPI1	YER150W	ALG9	P53868	555 aa	Known RBP	3.35	□□□□□ -1.87
SPI1	YER150W	FMP41	P53889	259 aa	Known RBP	3.35	□□□□□ -1.87
SPI1	YER150W	YNL033W	P53964	284 aa		3.35	□□□□□ -1.87
SPI1	YER150W	YNL019C	P53975	284 aa		3.35	□□□□□ -1.87
SPI1	YER150W	NAT3	Q06504	195 aa		3.35	□□□□□ -1.87
SPI1	YER150W	SNX3	Q08826	162 aa	Known RBP	3.35	□□□□□ -1.87
SPI1	YER150W	YLR412C-A	Q3E742	68 aa		3.35	□□□□□ -1.87
SPI1	YER150W	YIL177C	P40434	1758 aa		3.35	□□□□□ -1.87
SPI1	YER150W	YJL225C	P40889	1758 aa		3.35	□□□□□ -1.87
SPI1	YER150W	MET5	P47169	1442 aa		3.35	□□□□□ -1.87
SPI1	YER150W	YHR139C-A	O13536	103 aa		3.34	□□□□□ -1.87
SPI1	YER150W	Q0255	P03881	472 aa		3.34	□□□□□ -1.87
SPI1	YER150W	RPS18A	P0CX55	146 aa	Known RBP	3.34	□□□□□ -1.87
SPI1	YER150W	RPS18B	P0CX56	146 aa	Predicted RBP	3.34	□□□□□ -1.87
SPI1	YER150W	ETR1	P38071	380 aa		3.34	□□□□□ -1.87
SPI1	YER150W	YBR090C	P38253	122 aa		3.34	□□□□□ -1.87
SPI1	YER150W	TRS20	P38334	175 aa		3.34	□□□□□ -1.87
SPI1	YER150W	YEL075C	P39972	122 aa		3.34	□□□□□ -1.87
SPI1	YER150W	YER189W	P40104	122 aa		3.34	□□□□□ -1.87
SPI1	YER150W	NSE4	P43124	402 aa		3.34	□□□□□ -1.87
SPI1	YER150W	TTI2	P47168	421 aa		3.34	□□□□□ -1.87
SPI1	YER150W	YGL230C	P53074	147 aa		3.34	□□□□□ -1.87
SPI1	YER150W	YKR005C	Q02203	525 aa		3.34	□□□□□ -1.87
SPI1	YER150W	RNH202	Q05635	350 aa		3.34	□□□□□ -1.87
SPI1	YER150W	YOR292C	Q08743	309 aa		3.34	□□□□□ -1.87
SPI1	YER150W	TIR4	Q12218	487 aa	Predicted RBP	3.34	□□□□□ -1.87
SPI1	YER150W	YLR122C	Q12312	125 aa		3.34	□□□□□ -1.87
SPI1	YER150W	OCA6	Q12454	224 aa		3.34	□□□□□ -1.87
SPI1	YER150W	RPL15A	P05748	204 aa	Known RBP	3.33	□□□□□ -1.88
SPI1	YER150W	PEX4	P29340	183 aa		3.33	□□□□□ -1.88
SPI1	YER150W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	3.33	□□□□□ -1.88	RIP-Chip
SPI1	YER150W	FMP46	P36141	133 aa	Known RBP	3.33	□□□□□ -1.88
SPI1	YER150W	YKR070W	P36151	352 aa	Known RBP	3.33	□□□□□ -1.88
SPI1	YER150W	YHR140W	P38842	239 aa		3.33	□□□□□ -1.88
SPI1	YER150W	CHS7	P38843	316 aa		3.33	□□□□□ -1.88
SPI1	YER150W	PRM5	P40476	318 aa		3.33	□□□□□ -1.88
SPI1	YER150W	FIS1	P40515	155 aa		3.33	□□□□□ -1.88
SPI1	YER150W	YIL024C	P40543	189 aa		3.33	□□□□□ -1.88
SPI1	YER150W	STB1	P42845	420 aa		3.33	□□□□□ -1.88
SPI1	YER150W	FIP1	P45976	327 aa		3.33	□□□□□ -1.88
SPI1	YER150W	VPS25	P47142	202 aa		3.33	□□□□□ -1.88
SPI1	YER150W	SBH1	P52870	82 aa		3.33	□□□□□ -1.88
SPI1	YER150W	RPL15B	P54780	204 aa	Predicted RBP	3.33	□□□□□ -1.88
SPI1	YER150W	YLR179C	Q06252	201 aa	Known RBP	3.33	□□□□□ -1.88
SPI1	YER150W	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	3.33	□□□□□ -1.88	not detected
SPI1	YER150W	YLR042C	Q07990	161 aa		3.33	□□□□□ -1.88
SPI1	YER150W	SCP1	Q08873	200 aa		3.33	□□□□□ -1.88
SPI1	YER150W	YPS3	Q12303	508 aa		3.33	□□□□□ -1.88
SPI1	YER150W	RDL1	Q12305	139 aa	Known RBP	3.33	□□□□□ -1.88
SPI1	YER150W	DGK1	Q12382	290 aa		3.33	□□□□□ -1.88
SPI1	YER150W	HUT1	Q12520	339 aa		3.33	□□□□□ -1.88
SPI1	YER150W	CSR2	Q12734	1121 aa		3.33	□□□□□ -1.88
SPI1	YER150W	YBL008W-A	Q3E821	79 aa		3.33	□□□□□ -1.88
SPI1	YER150W	RPS14A	P06367	137 aa	Known RBP	3.32	□□□□□ -1.88
SPI1	YER150W	HYP2	P23301	157 aa	Known RBP	3.32	□□□□□ -1.88
SPI1	YER150W	GGC1	P38988	300 aa		3.32	□□□□□ -1.88
SPI1	YER150W	TIM17	P39515	158 aa		3.32	□□□□□ -1.88
SPI1	YER150W	RPS14B	P39516	138 aa	Known RBP	3.32	□□□□□ -1.88
SPI1	YER150W	AST2	P39945	430 aa	Known RBP	3.32	□□□□□ -1.88
SPI1	YER150W	EDC2	P40023	145 aa	Predicted RBP	3.32	□□□□□ -1.88
SPI1	YER150W	YER181C	P40097	107 aa		3.32	□□□□□ -1.88
SPI1	YER150W	YJL213W	P40896	331 aa		3.32	□□□□□ -1.88
SPI1	YER150W	TDA4	P47153	279 aa		3.32	□□□□□ -1.88
SPI1	YER150W	FMP42	Q04991	504 aa		3.32	□□□□□ -1.88
SPI1	YER150W	MIM1	Q08176	113 aa		3.32	□□□□□ -1.88
SPI1	YER150W	GTT2	Q12390	233 aa		3.32	□□□□□ -1.88
SPI1	YER150W	YCR075W-A	Q3E830	75 aa		3.32	□□□□□ -1.88
SPI1	YER150W	TDA8	Q6B2U8	126 aa		3.32	□□□□□ -1.88
SPI1	YER150W	RPO31	P04051	1460 aa		3.32	□□□□□ -1.88
SPI1	YER150W	HSL1	P34244	1518 aa		3.31	□□□□□ -1.88

Retrieved 100 of 5,963 RNA–protein pairs in 21 ms