RNA–Protein interactions for RNA: YDR460W

TFB3, Transcript of Subunit of TFIIH and nucleotide excision repair factor 3 complexes, yeast

Gene TFB3, Length 966 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFB3	YDR460W	TKL2	P33315	681 aa		4.07	□□□□□ -1.76
TFB3	YDR460W	MSN2	P33748	704 aa		4.07	□□□□□ -1.76
TFB3	YDR460W	MET30	P39014	640 aa		4.07	□□□□□ -1.76
TFB3	YDR460W	ATF1	P40353	525 aa		4.07	□□□□□ -1.76
TFB3	YDR460W	CAT5	P41735	233 aa		4.07	□□□□□ -1.76
TFB3	YDR460W	YJR015W	P47090	510 aa		4.07	□□□□□ -1.76
TFB3	YDR460W	YGR149W	P48236	432 aa		4.07	□□□□□ -1.76
TFB3	YDR460W	YIP4	P53093	235 aa		4.07	□□□□□ -1.76
TFB3	YDR460W	SGF73	P53165	657 aa		4.07	□□□□□ -1.76
TFB3	YDR460W	ERG26	P53199	349 aa	Known RBP	4.07	□□□□□ -1.76
TFB3	YDR460W	PLB3	Q08108	686 aa		4.07	□□□□□ -1.76
TFB3	YDR460W	TGS1	Q12052	315 aa		4.07	□□□□□ -1.76
TFB3	YDR460W	TIR4	Q12218	487 aa	Predicted RBP	4.07	□□□□□ -1.76
TFB3	YDR460W	RPS28A	Q3E7X9	67 aa	Predicted RBP	4.07	□□□□□ -1.76
TFB3	YDR460W	YOR338W	Q99326	363 aa		4.07	□□□□□ -1.76
TFB3	YDR460W	MBF1	O14467	151 aa	Known RBP	4.06	□□□□□ -1.76
TFB3	YDR460W	MTR2	P34232	184 aa	Known RBP	4.06	□□□□□ -1.76
TFB3	YDR460W	MCR1	P36060	302 aa	Known RBP	4.06	□□□□□ -1.76
TFB3	YDR460W	REG2	P38232	338 aa		4.06	□□□□□ -1.76
TFB3	YDR460W	DER1	P38307	211 aa		4.06	□□□□□ -1.76
TFB3	YDR460W	SLM6	P38343	150 aa		4.06	□□□□□ -1.76
TFB3	YDR460W	YHL041W	P38730	149 aa		4.06	□□□□□ -1.76
TFB3	YDR460W	SRP14	P38985	146 aa		4.06	□□□□□ -1.76
TFB3	YDR460W	YEA4	P40004	342 aa		4.06	□□□□□ -1.76
TFB3	YDR460W	YNL195C	P40168	261 aa		4.06	□□□□□ -1.76
TFB3	YDR460W	OSW5	P40219	148 aa		4.06	□□□□□ -1.76
TFB3	YDR460W	CIN2	P46670	268 aa		4.06	□□□□□ -1.76
TFB3	YDR460W	YHC3	P47040	408 aa		4.06	□□□□□ -1.76
TFB3	YDR460W	MIC27	P50945	234 aa		4.06	□□□□□ -1.76
TFB3	YDR460W	ERG25	P53045	309 aa		4.06	□□□□□ -1.76
TFB3	YDR460W	YIP3	P53633	176 aa		4.06	□□□□□ -1.76
TFB3	YDR460W	CDC14	Q00684	551 aa		4.06	□□□□□ -1.76
TFB3	YDR460W	ARA2	Q04212	335 aa		4.06	□□□□□ -1.76
TFB3	YDR460W	ECM18	Q04623	453 aa		4.06	□□□□□ -1.76
TFB3	YDR460W	SWC7	Q06707	132 aa		4.06	□□□□□ -1.76
TFB3	YDR460W	YPL162C	Q12042	273 aa		4.06	□□□□□ -1.76
TFB3	YDR460W	TPT1	Q12272	230 aa	Known RBP	4.06	□□□□□ -1.76
TFB3	YDR460W	YLR363W-A	Q3E747	85 aa		4.06	□□□□□ -1.76
TFB3	YDR460W	YKL018C-A	Q3E7A7	99 aa		4.06	□□□□□ -1.76
TFB3	YDR460W	HEM4	P06174	275 aa		4.05	□□□□□ -1.76
TFB3	YDR460W	RIP1	P08067	215 aa		4.05	□□□□□ -1.76
TFB3	YDR460W	SPT15	P13393	240 aa	Known RBP	4.05	□□□□□ -1.76
TFB3	YDR460W	DPM1	P14020	267 aa	Known RBP	4.05	□□□□□ -1.76
TFB3	YDR460W	YOR062C	P36025	268 aa		4.05	□□□□□ -1.76
TFB3	YDR460W	PAN3	P36102	679 aa	Predicted RBP	4.05	□□□□□ -1.76
TFB3	YDR460W	UMP1	P38293	148 aa		4.05	□□□□□ -1.76
TFB3	YDR460W	NTC20	P38302	140 aa	Predicted RBP	4.05	□□□□□ -1.76
TFB3	YDR460W	YHR130C	P38834	111 aa		4.05	□□□□□ -1.76
TFB3	YDR460W	MAF1	P41910	395 aa		4.05	□□□□□ -1.76
TFB3	YDR460W	ATG27	P46989	271 aa		4.05	□□□□□ -1.76
TFB3	YDR460W	YJL163C	P46996	555 aa		4.05	□□□□□ -1.76
TFB3	YDR460W	SFH5	P47008	294 aa		4.05	□□□□□ -1.76
TFB3	YDR460W	YDL186W	P48568	277 aa		4.05	□□□□□ -1.76
TFB3	YDR460W	BNS1	P50084	137 aa		4.05	□□□□□ -1.76
TFB3	YDR460W	LST7	P53237	242 aa		4.05	□□□□□ -1.76
TFB3	YDR460W	RHO4	Q00246	291 aa		4.05	□□□□□ -1.76
TFB3	YDR460W	UBC7	Q02159	165 aa		4.05	□□□□□ -1.76
TFB3	YDR460W	EMI1	Q04406	187 aa		4.05	□□□□□ -1.76
TFB3	YDR460W	LIP2	Q06005	328 aa		4.05	□□□□□ -1.76
TFB3	YDR460W	TMS1	Q12116	473 aa		4.05	□□□□□ -1.76
TFB3	YDR460W	YRA1	Q12159	226 aa	Known RBP	4.05	□□□□□ -1.76
TFB3	YDR460W	ERV2	Q12284	196 aa		4.05	□□□□□ -1.76
TFB3	YDR460W	FRE7	Q12333	620 aa		4.05	□□□□□ -1.76
TFB3	YDR460W	POM34	Q12445	299 aa		4.05	□□□□□ -1.76
TFB3	YDR460W	ATG40	Q99325	256 aa		4.05	□□□□□ -1.76
TFB3	YDR460W	CYC3	P06182	269 aa		4.04	□□□□□ -1.76
TFB3	YDR460W	RPL1A	P0CX43	217 aa	Known RBP	4.04	□□□□□ -1.76
TFB3	YDR460W	RPL1B	P0CX44	217 aa	Known RBP	4.04	□□□□□ -1.76
TFB3	YDR460W	URA5	P13298	226 aa	Known RBP	4.04	□□□□□ -1.76
TFB3	YDR460W	GLN3	P18494	730 aa		4.04	□□□□□ -1.76
TFB3	YDR460W	FUB1	P25659	250 aa		4.04	□□□□□ -1.76
TFB3	YDR460W	SRB5	P32585	307 aa		4.04	□□□□□ -1.76
TFB3	YDR460W	RAD23	P32628	398 aa	Known RBP	4.04	□□□□□ -1.76
TFB3	YDR460W	RPS20	P38701	121 aa	Known RBP	4.04	□□□□□ -1.76
TFB3	YDR460W	YHR138C	P38841	114 aa	Predicted RBP	4.04	□□□□□ -1.76
TFB3	YDR460W	PRE5	P40302	234 aa	Known RBP	4.04	□□□□□ -1.76
TFB3	YDR460W	YJL068C	P40363	299 aa		4.04	□□□□□ -1.76
TFB3	YDR460W	POP1	P41812	875 aa		4.04	□□□□□ -1.76
TFB3	YDR460W	RMD9	P53140	646 aa	Known RBP	4.04	□□□□□ -1.76
TFB3	YDR460W	DUO1	P53168	247 aa	Known RBP	4.04	□□□□□ -1.76
TFB3	YDR460W	SUN4	P53616	420 aa		4.04	□□□□□ -1.76
TFB3	YDR460W	MRPL19	P53875	158 aa		4.04	□□□□□ -1.76
TFB3	YDR460W	YNL184C	P53876	108 aa		4.04	□□□□□ -1.76
TFB3	YDR460W	GIS1	Q03833	894 aa		4.04	□□□□□ -1.76
TFB3	YDR460W	ELP6	Q04868	273 aa		4.04	□□□□□ -1.76
TFB3	YDR460W	HRI1	Q05905	244 aa	Known RBP	4.04	□□□□□ -1.76
TFB3	YDR460W	BSP1	Q06604	576 aa		4.04	□□□□□ -1.76
TFB3	YDR460W	YOL073C	Q08232	322 aa		4.04	□□□□□ -1.76
TFB3	YDR460W	IRC13	Q08630	104 aa		4.04	□□□□□ -1.76
TFB3	YDR460W	YDL157C	Q12082	118 aa		4.04	□□□□□ -1.76
TFB3	YDR460W	RKI1	Q12189	258 aa		4.04	□□□□□ -1.76
TFB3	YDR460W	RDL1	Q12305	139 aa	Known RBP	4.04	□□□□□ -1.76
TFB3	YDR460W	RAX2	Q12465	1220 aa		4.04	□□□□□ -1.76
TFB3	YDR460W	YCL012C	Q8J0M4	134 aa		4.04	□□□□□ -1.76
TFB3	YDR460W	YLR422W	Q06409	1932 aa		4.03	□□□□□ -1.76
TFB3	YDR460W	PAU1	P0CE88	120 aa		4.03	□□□□□ -1.76
TFB3	YDR460W	PAU14	P0CE89	120 aa		4.03	□□□□□ -1.76
TFB3	YDR460W	PAU6	P0CE90	120 aa		4.03	□□□□□ -1.76
TFB3	YDR460W	PAU18	P0CE91	120 aa		4.03	□□□□□ -1.76
TFB3	YDR460W	PAU8	P0CE92	120 aa		4.03	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 30.1 ms