RNA–Protein interactions for RNA: YDR243C

PRP28, Transcript of RNA helicase in the DEAD-box family, yeastyeast

Gene PRP28, Length 1,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP28YDR243C MCR1P36060 302 aaKnown RBP3.96□□□□□ -1.78
PRP28YDR243C PAN3P36102 679 aaPredicted RBP3.96□□□□□ -1.78
PRP28YDR243C ECM33P38248 429 aaKnown RBP3.96□□□□□ -1.78
PRP28YDR243C PEX7P39108 375 aa3.96□□□□□ -1.78
PRP28YDR243C YNL198CP40166 100 aa3.96□□□□□ -1.78
PRP28YDR243C PFS2P42841 465 aaKnown RBP3.96□□□□□ -1.78
PRP28YDR243C PUS2P53167 370 aa3.96□□□□□ -1.78
PRP28YDR243C DUG3P53871 357 aa3.96□□□□□ -1.78
PRP28YDR243C TSA2Q04120 196 aa3.96□□□□□ -1.78
PRP28YDR243C YML053CQ04978 212 aa3.96□□□□□ -1.78
PRP28YDR243C YPR174CQ06616 221 aaPredicted RBP3.96□□□□□ -1.78
PRP28YDR243C NRT1Q08485 598 aa3.96□□□□□ -1.78
PRP28YDR243C RPL7BQ12213 244 aaKnown RBP3.96□□□□□ -1.78
PRP28YDR243C VPS63O13549 108 aa3.95□□□□□ -1.78
PRP28YDR243C GAS1P22146 559 aaKnown RBP3.95□□□□□ -1.78
PRP28YDR243C YCR090CP25654 182 aaKnown RBP3.95□□□□□ -1.78
PRP28YDR243C MF(ALPHA)2P32435 120 aa3.95□□□□□ -1.78
PRP28YDR243C YBR090CP38253 122 aa3.95□□□□□ -1.78
PRP28YDR243C NDT80P38830 627 aa3.95□□□□□ -1.78
PRP28YDR243C PHS1P40857 217 aa3.95□□□□□ -1.78
PRP28YDR243C YFL065CP43539 102 aa3.95□□□□□ -1.78
PRP28YDR243C TTI2P47168 421 aa3.95□□□□□ -1.78
PRP28YDR243C RMD9P53140 646 aaKnown RBP3.95□□□□□ -1.78
PRP28YDR243C YPR203WQ08994 102 aa3.95□□□□□ -1.78
PRP28YDR243C DAP1Q12091 152 aa3.95□□□□□ -1.78
PRP28YDR243C SWT1Q12104 458 aa3.95□□□□□ -1.78
PRP28YDR243C TIR4Q12218 487 aaPredicted RBP3.95□□□□□ -1.78
PRP28YDR243C ERV2Q12284 196 aa3.95□□□□□ -1.78
PRP28YDR243C ADH1P00330 348 aaKnown RBP3.94□□□□□ -1.78
PRP28YDR243C YKR104WP0CE69 306 aa3.94□□□□□ -1.78
PRP28YDR243C POX1P13711 748 aa3.94□□□□□ -1.78
PRP28YDR243C YCR007CP25354 239 aa3.94□□□□□ -1.78
PRP28YDR243C TRR1P29509 319 aaKnown RBP3.94□□□□□ -1.78
PRP28YDR243C ALK2P32789 676 aaPredicted RBP3.94□□□□□ -1.78
PRP28YDR243C SLC1P33333 303 aa3.94□□□□□ -1.78
PRP28YDR243C TIF34P40217 347 aaKnown RBP3.94□□□□□ -1.78
PRP28YDR243C COA1P40452 197 aa3.94□□□□□ -1.78
PRP28YDR243C AZF1P41696 914 aa3.94□□□□□ -1.78
PRP28YDR243C SNO3P43544 222 aa3.94□□□□□ -1.78
PRP28YDR243C HSV2P50079 448 aaPredicted RBP3.94□□□□□ -1.78
PRP28YDR243C YGL262WP53054 175 aa3.94□□□□□ -1.78
PRP28YDR243C SNO2P53823 222 aa3.94□□□□□ -1.78
PRP28YDR243C PDR17P53844 350 aa3.94□□□□□ -1.78
PRP28YDR243C UTP15Q04305 513 aaKnown RBP3.94□□□□□ -1.78
PRP28YDR243C EMI1Q04406 187 aa3.94□□□□□ -1.78
PRP28YDR243C COQ11Q05892 277 aa3.94□□□□□ -1.78
PRP28YDR243C PFA4Q12006 378 aa3.94□□□□□ -1.78
PRP28YDR243C STE7P06784 515 aa3.94□□□□□ -1.78
PRP28YDR243C ADK1P07170 222 aaKnown RBP3.94□□□□□ -1.78
PRP28YDR243C FCY2P17064 533 aa3.94□□□□□ -1.78
PRP28YDR243C YIH1P25637 258 aa3.94□□□□□ -1.78
PRP28YDR243C MSS51P32335 436 aa3.94□□□□□ -1.78
PRP28YDR243C HXT4P32467 576 aa3.94□□□□□ -1.78
PRP28YDR243C DUT1P33317 147 aa3.94□□□□□ -1.78
PRP28YDR243C PAU16P35994 123 aa3.94□□□□□ -1.78
PRP28YDR243C UMP1P38293 148 aa3.94□□□□□ -1.78
PRP28YDR243C AYR1P40471 297 aa3.94□□□□□ -1.78
PRP28YDR243C MSL1P40567 111 aaPredicted RBP3.94□□□□□ -1.78
PRP28YDR243C YIP1P53039 248 aa3.94□□□□□ -1.78
PRP28YDR243C YMR206WQ03695 313 aa3.94□□□□□ -1.78
PRP28YDR243C YPR027CQ12079 277 aa3.94□□□□□ -1.78
PRP28YDR243C CTA1P15202 515 aa3.93□□□□□ -1.78
PRP28YDR243C HYP2P23301 157 aaKnown RBP3.93□□□□□ -1.78
PRP28YDR243C SCO1P23833 295 aa3.93□□□□□ -1.78
PRP28YDR243C LRE1P25579 583 aaKnown RBP3.93□□□□□ -1.78
PRP28YDR243C COX13P32799 129 aa3.93□□□□□ -1.78
PRP28YDR243C PTH1P38876 190 aaKnown RBP3.93□□□□□ -1.78
PRP28YDR243C PAM16P42949 149 aa3.93□□□□□ -1.78
PRP28YDR243C UBP8P50102 471 aa3.93□□□□□ -1.78
PRP28YDR243C TRM112P53738 135 aaPredicted RBP3.93□□□□□ -1.78
PRP28YDR243C AQR1P53943 586 aa3.93□□□□□ -1.78
PRP28YDR243C ADD37Q03233 198 aa3.93□□□□□ -1.78
PRP28YDR243C GRH1Q04410 372 aaKnown RBP3.93□□□□□ -1.78
PRP28YDR243C YOL024WQ08172 172 aa3.93□□□□□ -1.78
PRP28YDR243C RAX2Q12465 1220 aa3.93□□□□□ -1.78
PRP28YDR243C DED1P06634 604 aaKnown RBP3.92□□□□□ -1.78
PRP28YDR243C CPT1P17898 393 aa3.92□□□□□ -1.78
PRP28YDR243C ATS1P31386 333 aa3.92□□□□□ -1.78
PRP28YDR243C FRM2P37261 193 aa3.92□□□□□ -1.78
PRP28YDR243C YMC2P38087 329 aa3.92□□□□□ -1.78
PRP28YDR243C SHE1P38200 338 aa3.92□□□□□ -1.78
PRP28YDR243C YHL026CP38740 315 aa3.92□□□□□ -1.78
PRP28YDR243C YHR138CP38841 114 aaPredicted RBP3.92□□□□□ -1.78
PRP28YDR243C UME6P39001 836 aa3.92□□□□□ -1.78
PRP28YDR243C ABF2Q02486 183 aa3.92□□□□□ -1.78
PRP28YDR243C NUP53Q03790 475 aa3.92□□□□□ -1.78
PRP28YDR243C LIP2Q06005 328 aa3.92□□□□□ -1.78
PRP28YDR243C OPI10Q08202 246 aa3.92□□□□□ -1.78
PRP28YDR243C YLR415CO13578 112 aa3.91□□□□□ -1.78
PRP28YDR243C UBC5P15732 148 aa3.91□□□□□ -1.78
PRP28YDR243C CDC43P18898 376 aa3.91□□□□□ -1.78
PRP28YDR243C MAK32P23060 363 aa3.91□□□□□ -1.78
PRP28YDR243C INO2P26798 304 aa3.91□□□□□ -1.78
PRP28YDR243C PRO1P32264 428 aa3.91□□□□□ -1.78
PRP28YDR243C MKK2P32491 506 aa3.91□□□□□ -1.78
PRP28YDR243C YKL107WP34251 309 aa3.91□□□□□ -1.78
PRP28YDR243C ALG13P53178 202 aa3.91□□□□□ -1.78
PRP28YDR243C YNR048WP53740 393 aa3.91□□□□□ -1.78
PRP28YDR243C IGO1P53897 168 aa3.91□□□□□ -1.78
PRP28YDR243C ASM4Q05166 528 aa3.91□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 23.8 ms