RNA–Protein interactions for RNA: YDR126W

SWF1, Transcript of Palmitoyltransferase that acts on transmembrane proteins, yeast

Gene SWF1, Length 1,011 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWF1	YDR126W	CBF1	P17106	351 aa		0.59	□□□□□ -2.31
SWF1	YDR126W	PET9	P18239	318 aa	Known RBP	0.59	□□□□□ -2.31
SWF1	YDR126W	MGT1	P26188	188 aa		0.59	□□□□□ -2.31
SWF1	YDR126W	EHD3	P28817	500 aa		0.59	□□□□□ -2.31
SWF1	YDR126W	ATP7	P30902	174 aa		0.59	□□□□□ -2.31
SWF1	YDR126W	ASF2	P32448	525 aa	Predicted RBP	0.59	□□□□□ -2.31
SWF1	YDR126W	TCA17	P32613	152 aa		0.59	□□□□□ -2.31
SWF1	YDR126W	TMA19	P35691	167 aa	Known RBP	0.59	□□□□□ -2.31
SWF1	YDR126W	YHR022C	P38763	256 aa		0.59	□□□□□ -2.31
SWF1	YDR126W	RTC3	P38804	111 aa	Predicted RBP	0.59	□□□□□ -2.31
SWF1	YDR126W	EGD2	P38879	174 aa	Known RBP	0.59	□□□□□ -2.31
SWF1	YDR126W	AVT2	P39981	480 aa		0.59	□□□□□ -2.31
SWF1	YDR126W	IRC22	P40006	225 aa		0.59	□□□□□ -2.31
SWF1	YDR126W	YER134C	P40081	178 aa		0.59	□□□□□ -2.31
SWF1	YDR126W	YNL217W	P40152	326 aa		0.59	□□□□□ -2.31
SWF1	YDR126W	YNL194C	P40169	301 aa		0.59	□□□□□ -2.31
SWF1	YDR126W	GVP36	P40531	326 aa	Known RBP	0.59	□□□□□ -2.31
SWF1	YDR126W	PRM10	P42946	383 aa		0.59	□□□□□ -2.31
SWF1	YDR126W	SMD3	P43321	101 aa	Known RBP	0.59	□□□□□ -2.31
SWF1	YDR126W	AIM25	P47140	327 aa		0.59	□□□□□ -2.31
SWF1	YDR126W	CWC23	P52868	283 aa	Predicted RBP	0.59	□□□□□ -2.31
SWF1	YDR126W	MMS2	P53152	137 aa		0.59	□□□□□ -2.31
SWF1	YDR126W	JAC1	P53193	184 aa		0.59	□□□□□ -2.31
SWF1	YDR126W	CYT2	Q00873	224 aa		0.59	□□□□□ -2.31
SWF1	YDR126W	HNT1	Q04344	158 aa	Known RBP	0.59	□□□□□ -2.31
SWF1	YDR126W	YMR315W	Q04869	349 aa	Known RBP	0.59	□□□□□ -2.31
SWF1	YDR126W	FSF1	Q12029	327 aa	Known RBP	0.59	□□□□□ -2.31
SWF1	YDR126W	YPL162C	Q12042	273 aa		0.59	□□□□□ -2.31
SWF1	YDR126W	YDL180W	Q12301	547 aa		0.59	□□□□□ -2.31
SWF1	YDR126W	TDA8	Q6B2U8	126 aa		0.59	□□□□□ -2.31
SWF1	YDR126W	ODC2	Q99297	307 aa		0.59	□□□□□ -2.31
SWF1	YDR126W	MBF1	O14467	151 aa	Known RBP	0.58	□□□□□ -2.32
SWF1	YDR126W	SIR2	P06700	562 aa		0.58	□□□□□ -2.32
SWF1	YDR126W	YLR156W	P0CE96	114 aa		0.58	□□□□□ -2.32
SWF1	YDR126W	YLR159W	P0CE97	114 aa		0.58	□□□□□ -2.32
SWF1	YDR126W	YLR161W	P0CE98	114 aa		0.58	□□□□□ -2.32
SWF1	YDR126W	SEC14	P24280	304 aa	Known RBP	0.58	□□□□□ -2.32
SWF1	YDR126W	CNB1	P25296	175 aa		0.58	□□□□□ -2.32
SWF1	YDR126W	RFA3	P26755	122 aa	Known RBP	0.58	□□□□□ -2.32
SWF1	YDR126W	TRR1	P29509	319 aa	Known RBP	0.58	□□□□□ -2.32
SWF1	YDR126W	SRY1	P36007	326 aa		0.58	□□□□□ -2.32
SWF1	YDR126W	TVP38	P36164	337 aa		0.58	□□□□□ -2.32
SWF1	YDR126W	MRPL17	P36528	281 aa		0.58	□□□□□ -2.32
SWF1	YDR126W	CTR2	P38865	189 aa		0.58	□□□□□ -2.32
SWF1	YDR126W	SEC72	P39742	193 aa	Known RBP	0.58	□□□□□ -2.32
SWF1	YDR126W	SKI6	P46948	246 aa	Predicted RBP	0.58	□□□□□ -2.32
SWF1	YDR126W	XPT1	P47165	209 aa		0.58	□□□□□ -2.32
SWF1	YDR126W	DOC1	P53068	250 aa		0.58	□□□□□ -2.32
SWF1	YDR126W	ALG13	P53178	202 aa		0.58	□□□□□ -2.32
SWF1	YDR126W	YGR050C	P53231	118 aa		0.58	□□□□□ -2.32
SWF1	YDR126W	YNL247W	P53852	767 aa	Known RBP	0.58	□□□□□ -2.32
SWF1	YDR126W	YMR295C	Q03559	197 aa		0.58	□□□□□ -2.32
SWF1	YDR126W	YDR249C	Q03787	373 aa		0.58	□□□□□ -2.32
SWF1	YDR126W	HPT1	Q04178	221 aa	Known RBP	0.58	□□□□□ -2.32
SWF1	YDR126W	CUE4	Q04201	117 aa	Predicted RBP	0.58	□□□□□ -2.32
SWF1	YDR126W	ANT1	Q06497	328 aa		0.58	□□□□□ -2.32
SWF1	YDR126W	CSI2	Q08054	341 aa		0.58	□□□□□ -2.32
SWF1	YDR126W	YOL024W	Q08172	172 aa		0.58	□□□□□ -2.32
SWF1	YDR126W	YNG1	Q08465	219 aa		0.58	□□□□□ -2.32
SWF1	YDR126W	ATG40	Q99325	256 aa		0.58	□□□□□ -2.32
SWF1	YDR126W	TUS1	Q06412	1307 aa		0.58	□□□□□ -2.32
SWF1	YDR126W	YDR157W	A0A023PZE8	133 aa		0.57	□□□□□ -2.32
SWF1	YDR126W	TIM9	O74700	87 aa		0.57	□□□□□ -2.32
SWF1	YDR126W	QCR7	P00128	127 aa		0.57	□□□□□ -2.32
SWF1	YDR126W	MRS1	P07266	363 aa		0.57	□□□□□ -2.32
SWF1	YDR126W	FZF1	P32805	299 aa		0.57	□□□□□ -2.32
SWF1	YDR126W	UBC6	P33296	250 aa	Predicted RBP	0.57	□□□□□ -2.32
SWF1	YDR126W	TAF14	P35189	244 aa		0.57	□□□□□ -2.32
SWF1	YDR126W	KDX1	P36005	433 aa		0.57	□□□□□ -2.32
SWF1	YDR126W	NSG1	P38837	291 aa		0.57	□□□□□ -2.32
SWF1	YDR126W	YHR180W	P38868	163 aa		0.57	□□□□□ -2.32
SWF1	YDR126W	MTW1	P39731	289 aa		0.57	□□□□□ -2.32
SWF1	YDR126W	EDC3	P39998	551 aa	Known RBP	0.57	□□□□□ -2.32
SWF1	YDR126W	RPL13B	P40212	199 aa	Known RBP	0.57	□□□□□ -2.32
SWF1	YDR126W	AGE2	P40529	298 aa		0.57	□□□□□ -2.32
SWF1	YDR126W	TDA4	P47153	279 aa		0.57	□□□□□ -2.32
SWF1	YDR126W	UBC12	P52491	188 aa		0.57	□□□□□ -2.32
SWF1	YDR126W	TIM13	P53299	105 aa		0.57	□□□□□ -2.32
SWF1	YDR126W	TMA20	P89886	181 aa	Predicted RBP	0.57	□□□□□ -2.32
SWF1	YDR126W	GAS3	Q03655	524 aa		0.57	□□□□□ -2.32
SWF1	YDR126W	TRM12	Q04235	462 aa		0.57	□□□□□ -2.32
SWF1	YDR126W	SPG3	Q04398	127 aa	Predicted RBP	0.57	□□□□□ -2.32
SWF1	YDR126W	SHH3	Q04487	196 aa		0.57	□□□□□ -2.32
SWF1	YDR126W	YHR007C-A	Q07074	71 aa		0.57	□□□□□ -2.32
SWF1	YDR126W	MSA1	Q08471	629 aa		0.57	□□□□□ -2.32
SWF1	YDR126W	DGA1	Q08650	418 aa		0.57	□□□□□ -2.32
SWF1	YDR126W	GIS3	Q12418	502 aa		0.57	□□□□□ -2.32
SWF1	YDR126W	RPL13A	Q12690	199 aa	Predicted RBP	0.57	□□□□□ -2.32
SWF1	YDR126W	YLR412C-A	Q3E742	68 aa		0.57	□□□□□ -2.32
SWF1	YDR126W	CMC2	Q3E7A4	109 aa		0.57	□□□□□ -2.32
SWF1	YDR126W	IGO2	Q9P305	131 aa		0.57	□□□□□ -2.32
SWF1	YDR126W	CMD1	P06787	147 aa	Known RBP	0.56	□□□□□ -2.32
SWF1	YDR126W	GPA2	P10823	449 aa		0.56	□□□□□ -2.32
SWF1	YDR126W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	0.56	□□□□□ -2.32	not detected
SWF1	YDR126W	TRX3	P25372	127 aa		0.56	□□□□□ -2.32
SWF1	YDR126W	TAH1	P25638	111 aa	Predicted RBP	0.56	□□□□□ -2.32
SWF1	YDR126W	OCH1	P31755	480 aa		0.56	□□□□□ -2.32
SWF1	YDR126W	SPS18	P32572	300 aa		0.56	□□□□□ -2.32
SWF1	YDR126W	SEC17	P32602	292 aa		0.56	□□□□□ -2.32
SWF1	YDR126W	NUF2	P33895	451 aa		0.56	□□□□□ -2.32

Retrieved 100 of 5,963 RNA–protein pairs in 50.1 ms