RNA–Protein interactions for RNA: YBR087W

RFC5, Transcript of Subunit of heteropentameric Replication factor C (RF-C), yeastyeast

Gene RFC5, Length 1,065 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RFC5YBR087W PRM10P42946 383 aa2.16□□□□□ -2.06
RFC5YBR087W APS3P47064 194 aa2.16□□□□□ -2.06
RFC5YBR087W NUP57P48837 541 aa2.16□□□□□ -2.06
RFC5YBR087W SWS2P53937 143 aa2.16□□□□□ -2.06
RFC5YBR087W TLG1Q03322 224 aa2.16□□□□□ -2.06
RFC5YBR087W YMR166CQ03829 368 aa2.16□□□□□ -2.06
RFC5YBR087W RRP40Q08285 240 aaKnown RBP2.16□□□□□ -2.06
RFC5YBR087W MSH5Q12175 901 aa2.16□□□□□ -2.06
RFC5YBR087W YOL107WQ12239 342 aa2.16□□□□□ -2.06
RFC5YBR087W YKL018C-AQ3E7A7 99 aa2.16□□□□□ -2.06
RFC5YBR087W YBL112CQ3E7Y4 105 aa2.16□□□□□ -2.06
RFC5YBR087W MSB2P32334 1306 aa2.16□□□□□ -2.06
RFC5YBR087W RHO1P06780 209 aaKnown RBP2.15□□□□□ -2.07
RFC5YBR087W YGL041W-AP0C5N3 154 aa2.15□□□□□ -2.07
RFC5YBR087W TAH1P25638 111 aaPredicted RBP2.15□□□□□ -2.07
RFC5YBR087W SUI1P32911 108 aaKnown RBP2.15□□□□□ -2.07
RFC5YBR087W YOR062CP36025 268 aa2.15□□□□□ -2.07
RFC5YBR087W YBR285WP38354 144 aa2.15□□□□□ -2.07
RFC5YBR087W EGD2P38879 174 aaKnown RBP2.15□□□□□ -2.07
RFC5YBR087W IPT1P38954 527 aa2.15□□□□□ -2.07
RFC5YBR087W RCY1P39531 840 aa2.15□□□□□ -2.07
RFC5YBR087W AIM2P39721 246 aa2.15□□□□□ -2.07
RFC5YBR087W COG3P40094 801 aa2.15□□□□□ -2.07
RFC5YBR087W SOK1P40317 901 aa2.15□□□□□ -2.07
RFC5YBR087W PRM8P53174 237 aa2.15□□□□□ -2.07
RFC5YBR087W SSU72P53538 206 aaPredicted RBP2.15□□□□□ -2.07
RFC5YBR087W MNT4P53745 580 aa2.15□□□□□ -2.07
RFC5YBR087W YMD8Q03697 442 aa2.15□□□□□ -2.07
RFC5YBR087W GRX3Q03835 250 aa2.15□□□□□ -2.07
RFC5YBR087W YML096WQ04489 525 aa2.15□□□□□ -2.07
RFC5YBR087W FCF1Q05498 189 aaPredicted RBP2.15□□□□□ -2.07
RFC5YBR087W UBR2Q07963 1872 aa2.15□□□□□ -2.07
RFC5YBR087W TOM1Q03280 3268 aa2.14□□□□□ -2.07
RFC5YBR087W SNF6P18888 332 aa2.14□□□□□ -2.07
RFC5YBR087W CWP1P28319 239 aa2.14□□□□□ -2.07
RFC5YBR087W LHP1P33399 275 aaKnown RBP2.14□□□□□ -2.07
RFC5YBR087W MRPL15P36523 253 aa2.14□□□□□ -2.07
RFC5YBR087W YBR063CP38083 404 aa2.14□□□□□ -2.07
RFC5YBR087W MPM1P40364 252 aa2.14□□□□□ -2.07
RFC5YBR087W YJR141WP47172 347 aaPredicted RBP2.14□□□□□ -2.07
RFC5YBR087W BAT2P47176 376 aaKnown RBP2.14□□□□□ -2.07
RFC5YBR087W NIF3P53081 288 aa2.14□□□□□ -2.07
RFC5YBR087W YGL101WP53144 215 aa2.14□□□□□ -2.07
RFC5YBR087W NUP49Q02199 472 aa2.14□□□□□ -2.07
RFC5YBR087W SNZ1Q03148 297 aa2.14□□□□□ -2.07
RFC5YBR087W GAL83Q04739 417 aa2.14□□□□□ -2.07
RFC5YBR087W YLR030WQ07967 263 aa2.14□□□□□ -2.07
RFC5YBR087W UIP4Q08926 304 aa2.14□□□□□ -2.07
RFC5YBR087W AGC1Q12482 902 aa2.14□□□□□ -2.07
RFC5YBR087W PBN1P25580 416 aa2.13□□□□□ -2.07
RFC5YBR087W IDH1P28834 360 aaKnown RBP RIP-Chip data2.13□□□□□ -2.07not detected
RFC5YBR087W OAC1P32332 324 aa2.13□□□□□ -2.07
RFC5YBR087W TAF14P35189 244 aa2.13□□□□□ -2.07
RFC5YBR087W AST2P39945 430 aaKnown RBP2.13□□□□□ -2.07
RFC5YBR087W CIS3P47001 227 aa2.13□□□□□ -2.07
RFC5YBR087W MPC1P53157 130 aaKnown RBP2.13□□□□□ -2.07
RFC5YBR087W SLX9P53251 210 aaPredicted RBP2.13□□□□□ -2.07
RFC5YBR087W YMR099CQ03161 297 aaKnown RBP2.13□□□□□ -2.07
RFC5YBR087W ATC1Q04005 294 aa2.13□□□□□ -2.07
RFC5YBR087W RNH1Q04740 348 aa2.13□□□□□ -2.07
RFC5YBR087W YMR315WQ04869 349 aaKnown RBP2.13□□□□□ -2.07
RFC5YBR087W PEX10Q05568 337 aa2.13□□□□□ -2.07
RFC5YBR087W RNH202Q05635 350 aa2.13□□□□□ -2.07
RFC5YBR087W TPO4Q12256 659 aa2.13□□□□□ -2.07
RFC5YBR087W YLR126CQ12288 251 aa2.13□□□□□ -2.07
RFC5YBR087W PST2Q12335 198 aaKnown RBP2.13□□□□□ -2.07
RFC5YBR087W YDR034W-BQ6Q5X2 51 aa2.13□□□□□ -2.07
RFC5YBR087W TOM40P23644 387 aaKnown RBP2.12□□□□□ -2.07
RFC5YBR087W RPL24BP24000 155 aaKnown RBP2.12□□□□□ -2.07
RFC5YBR087W HSP30P25619 332 aa2.12□□□□□ -2.07
RFC5YBR087W AHC2P25649 128 aa2.12□□□□□ -2.07
RFC5YBR087W ARC19P33204 171 aaKnown RBP2.12□□□□□ -2.07
RFC5YBR087W RIB7P33312 244 aa2.12□□□□□ -2.07
RFC5YBR087W NVJ1P38881 321 aa2.12□□□□□ -2.07
RFC5YBR087W FMC1P40491 155 aa2.12□□□□□ -2.07
RFC5YBR087W ALB1P47019 175 aaPredicted RBP2.12□□□□□ -2.07
RFC5YBR087W YJL118WP47022 219 aa2.12□□□□□ -2.07
RFC5YBR087W YJR012CP47087 207 aa2.12□□□□□ -2.07
RFC5YBR087W JHD2P47156 728 aaPredicted RBP2.12□□□□□ -2.07
RFC5YBR087W TRM9P49957 279 aa2.12□□□□□ -2.07
RFC5YBR087W GIM3P53900 129 aa2.12□□□□□ -2.07
RFC5YBR087W YLR460CP54007 376 aa2.12□□□□□ -2.07
RFC5YBR087W RGM1Q00453 211 aa2.12□□□□□ -2.07
RFC5YBR087W OST6Q03723 332 aa2.12□□□□□ -2.07
RFC5YBR087W RRP17Q04031 235 aaPredicted RBP2.12□□□□□ -2.07
RFC5YBR087W RDS3Q06835 107 aaPredicted RBP2.12□□□□□ -2.07
RFC5YBR087W BRX1Q08235 291 aaKnown RBP2.12□□□□□ -2.07
RFC5YBR087W SME1Q12330 94 aaPredicted RBP2.12□□□□□ -2.07
RFC5YBR087W PSF1Q12488 208 aa2.12□□□□□ -2.07
RFC5YBR087W MSW1P04803 379 aa2.11□□□□□ -2.07
RFC5YBR087W YSF3P0C074 85 aaPredicted RBP2.11□□□□□ -2.07
RFC5YBR087W YOL162WP0CF19 215 aa2.11□□□□□ -2.07
RFC5YBR087W DPM1P14020 267 aaKnown RBP2.11□□□□□ -2.07
RFC5YBR087W JEN1P36035 616 aa2.11□□□□□ -2.07
RFC5YBR087W SHE2P36068 246 aaKnown RBP RIP-Chip data2.11□□□□□ -2.07not detected
RFC5YBR087W FCY21P40039 528 aa2.11□□□□□ -2.07
RFC5YBR087W ICE2P40499 491 aa2.11□□□□□ -2.07
RFC5YBR087W SER2P42941 309 aa2.11□□□□□ -2.07
RFC5YBR087W YJL028WP47062 111 aa2.11□□□□□ -2.07
RFC5YBR087W MPP6P53725 186 aaPredicted RBP2.11□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 139.4 ms