RNA–Protein interactions for RNA: YAL059W

ECM1, Transcript of Pre-ribosomal factor involved in 60S ribosomal protein subunit export, yeast

Gene ECM1, Length 639 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ECM1	YAL059W	HTL1	Q9URQ5	78 aa		4.04	□□□□□ -1.76
ECM1	YAL059W	CKS1	P20486	150 aa	Known RBP	4.03	□□□□□ -1.76
ECM1	YAL059W	BUD23	P25627	275 aa	Predicted RBP	4.03	□□□□□ -1.76
ECM1	YAL059W	UGX2	P32772	223 aa		4.03	□□□□□ -1.76
ECM1	YAL059W	OPY1	P38271	328 aa		4.03	□□□□□ -1.76
ECM1	YAL059W	FCY21	P40039	528 aa		4.03	□□□□□ -1.76
ECM1	YAL059W	AVT6	P40074	448 aa		4.03	□□□□□ -1.76
ECM1	YAL059W	YER189W	P40104	122 aa		4.03	□□□□□ -1.76
ECM1	YAL059W	RPE1	P46969	238 aa		4.03	□□□□□ -1.76
ECM1	YAL059W	YGL262W	P53054	175 aa		4.03	□□□□□ -1.76
ECM1	YAL059W	ORM1	P53224	222 aa		4.03	□□□□□ -1.76
ECM1	YAL059W	SWT21	P53873	357 aa	Predicted RBP	4.03	□□□□□ -1.76
ECM1	YAL059W	THI74	Q04083	370 aa		4.03	□□□□□ -1.76
ECM1	YAL059W	MRX8	Q05473	314 aa		4.03	□□□□□ -1.76
ECM1	YAL059W	YOR376W	Q08900	122 aa		4.03	□□□□□ -1.76
ECM1	YAL059W	YPL162C	Q12042	273 aa		4.03	□□□□□ -1.76
ECM1	YAL059W	YOR342C	Q12182	319 aa		4.03	□□□□□ -1.76
ECM1	YAL059W	YAL063C-A	Q3E791	96 aa		4.03	□□□□□ -1.76
ECM1	YAL059W	SSN2	P38931	1420 aa		4.03	□□□□□ -1.76
ECM1	YAL059W	RPL30	P14120	105 aa	Known RBP	4.02	□□□□□ -1.77
ECM1	YAL059W	RPC19	P28000	142 aa	Known RBP	4.02	□□□□□ -1.77
ECM1	YAL059W	MRP49	P32388	137 aa		4.02	□□□□□ -1.77
ECM1	YAL059W	CSE2	P33308	149 aa		4.02	□□□□□ -1.77
ECM1	YAL059W	SHE2	P36068	246 aa	Known RBP RIP-Chip data	4.02	□□□□□ -1.77	not detected
ECM1	YAL059W	PAN3	P36102	679 aa	Predicted RBP	4.02	□□□□□ -1.77
ECM1	YAL059W	CSH1	P38287	376 aa		4.02	□□□□□ -1.77
ECM1	YAL059W	YPL073C	P40323	161 aa		4.02	□□□□□ -1.77
ECM1	YAL059W	DLS1	P40366	167 aa		4.02	□□□□□ -1.77
ECM1	YAL059W	ATG18	P43601	500 aa		4.02	□□□□□ -1.77
ECM1	YAL059W	YDR366C	P87287	132 aa		4.02	□□□□□ -1.77
ECM1	YAL059W	APS2	Q00381	147 aa		4.02	□□□□□ -1.77
ECM1	YAL059W	JID1	Q12350	301 aa		4.02	□□□□□ -1.77
ECM1	YAL059W	YBR298C-A	Q8TGK4	73 aa		4.02	□□□□□ -1.77
ECM1	YAL059W	RPS8A	P0CX39	200 aa	Known RBP	4.01	□□□□□ -1.77
ECM1	YAL059W	RPS8B	P0CX40	200 aa	Known RBP	4.01	□□□□□ -1.77
ECM1	YAL059W	NMT1	P14743	455 aa		4.01	□□□□□ -1.77
ECM1	YAL059W	PET9	P18239	318 aa	Known RBP	4.01	□□□□□ -1.77
ECM1	YAL059W	LPP1	Q04396	274 aa		4.01	□□□□□ -1.77
ECM1	YAL059W	IES3	Q12345	250 aa		4.01	□□□□□ -1.77
ECM1	YAL059W	YFR032C-B	Q8TGU2	87 aa		4.01	□□□□□ -1.77
ECM1	YAL059W	Q0255	P03881	472 aa		4	□□□□□ -1.77
ECM1	YAL059W	RSA4	P25382	515 aa	Known RBP	4	□□□□□ -1.77
ECM1	YAL059W	SDH3	P33421	198 aa		4	□□□□□ -1.77
ECM1	YAL059W	AVT2	P39981	480 aa		4	□□□□□ -1.77
ECM1	YAL059W	TIF34	P40217	347 aa	Known RBP	4	□□□□□ -1.77
ECM1	YAL059W	AYR1	P40471	297 aa		4	□□□□□ -1.77
ECM1	YAL059W	GLR1	P41921	483 aa	Known RBP	4	□□□□□ -1.77
ECM1	YAL059W	YFR054C	P43622	192 aa		4	□□□□□ -1.77
ECM1	YAL059W	YJL028W	P47062	111 aa		4	□□□□□ -1.77
ECM1	YAL059W	YGL088W	P53151	121 aa		4	□□□□□ -1.77
ECM1	YAL059W	YGR039W	P53225	103 aa		4	□□□□□ -1.77
ECM1	YAL059W	CAB4	P53332	305 aa		4	□□□□□ -1.77
ECM1	YAL059W	SLM2	P53955	656 aa		4	□□□□□ -1.77
ECM1	YAL059W	RPL21A	Q02753	160 aa	Known RBP	4	□□□□□ -1.77
ECM1	YAL059W	CWC27	Q02770	301 aa		4	□□□□□ -1.77
ECM1	YAL059W	INP1	Q03694	420 aa		4	□□□□□ -1.77
ECM1	YAL059W	EMI1	Q04406	187 aa		4	□□□□□ -1.77
ECM1	YAL059W	GRH1	Q04410	372 aa	Known RBP	4	□□□□□ -1.77
ECM1	YAL059W	YMR253C	Q04835	414 aa		4	□□□□□ -1.77
ECM1	YAL059W	SLD7	Q08457	257 aa		4	□□□□□ -1.77
ECM1	YAL059W	YPL264C	Q08980	353 aa		4	□□□□□ -1.77
ECM1	YAL059W	PPT2	Q12036	173 aa		4	□□□□□ -1.77
ECM1	YAL059W	FCY1	Q12178	158 aa		4	□□□□□ -1.77
ECM1	YAL059W	YDL180W	Q12301	547 aa		4	□□□□□ -1.77
ECM1	YAL059W	IZH2	Q12442	317 aa		4	□□□□□ -1.77
ECM1	YAL059W	YOR020W-A	Q3E824	90 aa		4	□□□□□ -1.77
ECM1	YAL059W	YPR170W-B	P0C5R9	85 aa		3.99	□□□□□ -1.77
ECM1	YAL059W	LDB16	P25587	256 aa		3.99	□□□□□ -1.77
ECM1	YAL059W	SEC17	P32602	292 aa		3.99	□□□□□ -1.77
ECM1	YAL059W	SKG1	P36169	355 aa		3.99	□□□□□ -1.77
ECM1	YAL059W	OM14	P38325	134 aa		3.99	□□□□□ -1.77
ECM1	YAL059W	GGC1	P38988	300 aa		3.99	□□□□□ -1.77
ECM1	YAL059W	KRE9	P39005	276 aa		3.99	□□□□□ -1.77
ECM1	YAL059W	AIM2	P39721	246 aa		3.99	□□□□□ -1.77
ECM1	YAL059W	XPT1	P47165	209 aa		3.99	□□□□□ -1.77
ECM1	YAL059W	YGR219W	P53307	113 aa		3.99	□□□□□ -1.77
ECM1	YAL059W	ALG9	P53868	555 aa	Known RBP	3.99	□□□□□ -1.77
ECM1	YAL059W	YDR115W	Q04598	105 aa		3.99	□□□□□ -1.77
ECM1	YAL059W	NIP7	Q08962	181 aa	Known RBP	3.99	□□□□□ -1.77
ECM1	YAL059W	TIM22	Q12328	207 aa		3.99	□□□□□ -1.77
ECM1	YAL059W	YBL112C	Q3E7Y4	105 aa		3.99	□□□□□ -1.77
ECM1	YAL059W	ADH1	P00330	348 aa	Known RBP	3.98	□□□□□ -1.77
ECM1	YAL059W	PHO85	P17157	305 aa		3.98	□□□□□ -1.77
ECM1	YAL059W	SUI1	P32911	108 aa	Known RBP	3.98	□□□□□ -1.77
ECM1	YAL059W	UTP30	P36144	274 aa	Known RBP	3.98	□□□□□ -1.77
ECM1	YAL059W	MSA2	P36157	363 aa		3.98	□□□□□ -1.77
ECM1	YAL059W	IRC22	P40006	225 aa		3.98	□□□□□ -1.77
ECM1	YAL059W	ACT1	P60010	375 aa	Known RBP	3.98	□□□□□ -1.77
ECM1	YAL059W	SAE3	P89114	91 aa		3.98	□□□□□ -1.77
ECM1	YAL059W	YPL039W	Q03080	316 aa		3.98	□□□□□ -1.77
ECM1	YAL059W	DIG2	Q03373	323 aa	Known RBP	3.98	□□□□□ -1.77
ECM1	YAL059W	YOR214C	Q12282	236 aa		3.98	□□□□□ -1.77
ECM1	YAL059W	YLR462W	O13556	202 aa		3.97	□□□□□ -1.77
ECM1	YAL059W	DDI2	P0CH63	225 aa		3.97	□□□□□ -1.77
ECM1	YAL059W	DDI3	P0CH64	225 aa		3.97	□□□□□ -1.77
ECM1	YAL059W	TIR1	P10863	254 aa		3.97	□□□□□ -1.77
ECM1	YAL059W	PRE7	P23724	241 aa	Known RBP	3.97	□□□□□ -1.77
ECM1	YAL059W	RPF1	P38805	295 aa	Known RBP	3.97	□□□□□ -1.77
ECM1	YAL059W	YEL075C	P39972	122 aa		3.97	□□□□□ -1.77
ECM1	YAL059W	TTI2	P47168	421 aa		3.97	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 49.4 ms