RNA–Protein interactions for RNA: ENST00000511944.5

NR1I3-230, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-230ENST00000511944 ZBTB45Q96K62 511 aaPredicted RBP9.8□□□□□ -0.84
NR1I3-230ENST00000511944 CCDC42Q96M95 316 aa9.8□□□□□ -0.84
NR1I3-230ENST00000511944 VRTNQ9H8Y1 702 aa9.8□□□□□ -0.84
NR1I3-230ENST00000511944 PDE11AQ9HCR9 933 aa9.8□□□□□ -0.84
NR1I3-230ENST00000511944 C1orf112Q9NSG2 853 aa9.8□□□□□ -0.84
NR1I3-230ENST00000511944 GMPR2Q9P2T1 348 aaKnown RBP9.8□□□□□ -0.84
NR1I3-230ENST00000511944 MYO1AQ9UBC5 1043 aa9.8□□□□□ -0.84
NR1I3-230ENST00000511944 OGDHLQ9ULD0 1010 aa9.8□□□□□ -0.84
NR1I3-230ENST00000511944 EPN1Q9Y6I3 576 aaPredicted RBP9.8□□□□□ -0.84
NR1I3-230ENST00000511944 MROH7Q68CQ1 1323 aa9.8□□□□□ -0.84
NR1I3-230ENST00000511944 FRMPD3Q5JV73 1810 aa9.79□□□□□ -0.84
NR1I3-230ENST00000511944 A0A1W2PQ45 241 aaPredicted RBP9.79□□□□□ -0.84
NR1I3-230ENST00000511944 A0A1W2PQY0 241 aa9.79□□□□□ -0.84
NR1I3-230ENST00000511944 GPR182O15218 404 aa9.79□□□□□ -0.84
NR1I3-230ENST00000511944 TMEM191BP0C7N4 346 aa9.79□□□□□ -0.84
NR1I3-230ENST00000511944 STAG3L1P0CL83 205 aa9.79□□□□□ -0.84
NR1I3-230ENST00000511944 ATICP31939 592 aa9.79□□□□□ -0.84
NR1I3-230ENST00000511944 SOX5P35711 763 aa9.79□□□□□ -0.84
NR1I3-230ENST00000511944 RAB27AP51159 221 aa9.79□□□□□ -0.84
NR1I3-230ENST00000511944 YARSP54577 528 aaKnown RBP9.79□□□□□ -0.84
NR1I3-230ENST00000511944 HTRA3P83110 453 aa9.79□□□□□ -0.84
NR1I3-230ENST00000511944 RAPGEF1Q13905 1077 aa9.79□□□□□ -0.84
NR1I3-230ENST00000511944 BMS1Q14692 1282 aaKnown RBP9.79□□□□□ -0.84
NR1I3-230ENST00000511944 ASIC2Q16515 512 aa9.79□□□□□ -0.84
NR1I3-230ENST00000511944 PTGISQ16647 500 aa9.79□□□□□ -0.84
NR1I3-230ENST00000511944 PTPN21Q16825 1174 aa9.79□□□□□ -0.84
NR1I3-230ENST00000511944 ASTE1Q2TB18 679 aaPredicted RBP9.79□□□□□ -0.84
NR1I3-230ENST00000511944 C6orf118Q5T5N4 469 aa9.79□□□□□ -0.84
NR1I3-230ENST00000511944 IQCEQ6IPM2 695 aa9.79□□□□□ -0.84
NR1I3-230ENST00000511944 TTC39CQ8N584 583 aa9.79□□□□□ -0.84
NR1I3-230ENST00000511944 ZSWIM2Q8NEG5 633 aa9.79□□□□□ -0.84
NR1I3-230ENST00000511944 CAGE1Q8TC20 777 aa9.79□□□□□ -0.84
NR1I3-230ENST00000511944 RSPH1Q8WYR4 309 aa9.79□□□□□ -0.84
NR1I3-230ENST00000511944 ZBTB10Q96DT7 871 aa9.79□□□□□ -0.84
NR1I3-230ENST00000511944 ZFP42Q96MM3 310 aa9.79□□□□□ -0.84
NR1I3-230ENST00000511944 OSMRQ99650 979 aa9.79□□□□□ -0.84
NR1I3-230ENST00000511944 TSGA10Q9BZW7 698 aa9.79□□□□□ -0.84
NR1I3-230ENST00000511944 HAUS4Q9H6D7 363 aa9.79□□□□□ -0.84
NR1I3-230ENST00000511944 ZNF395Q9H8N7 513 aaPredicted RBP9.79□□□□□ -0.84
NR1I3-230ENST00000511944 NHEJ1Q9H9Q4 299 aaPredicted RBP9.79□□□□□ -0.84
NR1I3-230ENST00000511944 NLRC4Q9NPP4 1024 aa9.79□□□□□ -0.84
NR1I3-230ENST00000511944 DNAJC12Q9UKB3 198 aa9.79□□□□□ -0.84
NR1I3-230ENST00000511944 ITGA11Q9UKX5 1188 aa9.79□□□□□ -0.84
NR1I3-230ENST00000511944 PPP2R2CQ9Y2T4 447 aa9.79□□□□□ -0.84
NR1I3-230ENST00000511944 FHOD1Q9Y613 1164 aa9.79□□□□□ -0.84
NR1I3-230ENST00000511944 GRIN2DO15399 1336 aa9.79□□□□□ -0.84
NR1I3-230ENST00000511944 KAT6AQ92794 2004 aa9.78□□□□□ -0.84
NR1I3-230ENST00000511944 SOWAHDA6NJG2 315 aa9.78□□□□□ -0.84
NR1I3-230ENST00000511944 ARVCFO00192 962 aa9.78□□□□□ -0.84
NR1I3-230ENST00000511944 XPOTO43592 962 aaKnown RBP9.78□□□□□ -0.84
NR1I3-230ENST00000511944 PARNO95453 639 aaKnown RBP9.78□□□□□ -0.84
NR1I3-230ENST00000511944 ASS1P00966 412 aaKnown RBP9.78□□□□□ -0.84
NR1I3-230ENST00000511944 HLA-DRAP01903 254 aa9.78□□□□□ -0.84
NR1I3-230ENST00000511944 ACTN1P12814 892 aa9.78□□□□□ -0.84
NR1I3-230ENST00000511944 PAX3P23760 479 aa9.78□□□□□ -0.84
NR1I3-230ENST00000511944 PIK3CAP42336 1068 aa9.78□□□□□ -0.84
NR1I3-230ENST00000511944 PTGIRP43119 386 aa9.78□□□□□ -0.84
NR1I3-230ENST00000511944 BPIFB4P59827 614 aa9.78□□□□□ -0.84
NR1I3-230ENST00000511944 YWHAEP62258 255 aaKnown RBP9.78□□□□□ -0.84
NR1I3-230ENST00000511944 KLHL30Q0D2K2 578 aa9.78□□□□□ -0.84
NR1I3-230ENST00000511944 USP4Q13107 963 aa9.78□□□□□ -0.84
NR1I3-230ENST00000511944 DRAP1Q14919 205 aaPredicted RBP9.78□□□□□ -0.84
NR1I3-230ENST00000511944 SPA17Q15506 151 aa9.78□□□□□ -0.84
NR1I3-230ENST00000511944 SLC18A3Q16572 532 aa9.78□□□□□ -0.84
NR1I3-230ENST00000511944 SGSM1Q2NKQ1 1148 aa9.78□□□□□ -0.84
NR1I3-230ENST00000511944 TRIM71Q2Q1W2 868 aaKnown RBP9.78□□□□□ -0.84
NR1I3-230ENST00000511944 XKR4Q5GH76 650 aa9.78□□□□□ -0.84
NR1I3-230ENST00000511944 C1orf53Q5VUE5 145 aa9.78□□□□□ -0.84
NR1I3-230ENST00000511944 TDRD10Q5VZ19 366 aaKnown RBP9.78□□□□□ -0.84
NR1I3-230ENST00000511944 PHLDB3Q6NSJ2 640 aa9.78□□□□□ -0.84
NR1I3-230ENST00000511944 PPP1R2P3Q6NXS1 205 aa9.78□□□□□ -0.84
NR1I3-230ENST00000511944 RAD9BQ6WBX8 426 aa9.78□□□□□ -0.84
NR1I3-230ENST00000511944 TRAPPC11Q7Z392 1133 aa9.78□□□□□ -0.84
NR1I3-230ENST00000511944 IRF2BP2Q7Z5L9 587 aa9.78□□□□□ -0.84
NR1I3-230ENST00000511944 ZNF677Q86XU0 584 aa9.78□□□□□ -0.84
NR1I3-230ENST00000511944 FAM71AQ8IYT1 594 aa9.78□□□□□ -0.84
NR1I3-230ENST00000511944 HELQQ8TDG4 1101 aa9.78□□□□□ -0.84
NR1I3-230ENST00000511944 TAS1R2Q8TE23 839 aa9.78□□□□□ -0.84
NR1I3-230ENST00000511944 UBE2Q2Q8WVN8 375 aa9.78□□□□□ -0.84
NR1I3-230ENST00000511944 PPP1R13BQ96KQ4 1090 aa9.78□□□□□ -0.84
NR1I3-230ENST00000511944 SNX27Q96L92 541 aa9.78□□□□□ -0.84
NR1I3-230ENST00000511944 ACAP3Q96P50 834 aa9.78□□□□□ -0.84
NR1I3-230ENST00000511944 DEF6Q9H4E7 631 aa9.78□□□□□ -0.84
NR1I3-230ENST00000511944 STARD7Q9NQZ5 370 aa9.78□□□□□ -0.84
NR1I3-230ENST00000511944 CNTN3Q9P232 1028 aa9.78□□□□□ -0.84
NR1I3-230ENST00000511944 ARHGAP20Q9P2F6 1191 aa9.78□□□□□ -0.84
NR1I3-230ENST00000511944 INTUQ9ULD6 942 aa9.78□□□□□ -0.84
NR1I3-230ENST00000511944 CNTN6Q9UQ52 1028 aa9.78□□□□□ -0.84
NR1I3-230ENST00000511944 NOD1Q9Y239 953 aa9.78□□□□□ -0.84
NR1I3-230ENST00000511944 PCDHGA11Q9Y5H2 935 aa9.78□□□□□ -0.84
NR1I3-230ENST00000511944 CDY2AQ9Y6F7 541 aa9.78□□□□□ -0.84
NR1I3-230ENST00000511944 RALGAPA2Q2PPJ7 1873 aa9.78□□□□□ -0.84
NR1I3-230ENST00000511944 BTNL10A8MVZ5 291 aa9.77□□□□□ -0.85
NR1I3-230ENST00000511944 KRT86O43790 486 aa9.77□□□□□ -0.85
NR1I3-230ENST00000511944 RPS6KA5O75582 802 aa9.77□□□□□ -0.85
NR1I3-230ENST00000511944 VNN1O95497 513 aa9.77□□□□□ -0.85
NR1I3-230ENST00000511944 P4HA1P13674 534 aa9.77□□□□□ -0.85
NR1I3-230ENST00000511944 KCNE1P15382 129 aa9.77□□□□□ -0.85
NR1I3-230ENST00000511944 CYP3A5P20815 502 aa9.77□□□□□ -0.85
NR1I3-230ENST00000511944 TNFSF9P41273 254 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms