RNA–Protein interactions for RNA: tC(GCA)B

tC(GCA)B, Transcript of Cysteine tRNA (tRNA-Cys), predicted by tRNAscan-SE analysis, yeastyeast

Gene tC(GCA)B, Length 72 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
tC(GCA)BtC(GCA)B YHR131CP38835 850 aa4.64□□□□□ -1.67
tC(GCA)BtC(GCA)B RRT6P53117 311 aaPredicted RBP4.64□□□□□ -1.67
tC(GCA)BtC(GCA)B JIP4Q03361 876 aa4.64□□□□□ -1.67
tC(GCA)BtC(GCA)B UTP10P42945 1769 aaKnown RBP4.63□□□□□ -1.67
tC(GCA)BtC(GCA)B RPN1P38764 993 aaKnown RBP4.63□□□□□ -1.67
tC(GCA)BtC(GCA)B YLR225CQ05948 407 aaKnown RBP4.63□□□□□ -1.67
tC(GCA)BtC(GCA)B TFC8Q12308 588 aa4.63□□□□□ -1.67
tC(GCA)BtC(GCA)B SPE2P21182 396 aa4.62□□□□□ -1.67
tC(GCA)BtC(GCA)B AFG2P32794 780 aa4.62□□□□□ -1.67
tC(GCA)BtC(GCA)B SET4P42948 560 aa4.62□□□□□ -1.67
tC(GCA)BtC(GCA)B AHC1Q12433 566 aa4.62□□□□□ -1.67
tC(GCA)BtC(GCA)B HKR1P41809 1802 aa4.62□□□□□ -1.67
tC(GCA)BtC(GCA)B HIP1P06775 603 aa4.61□□□□□ -1.67
tC(GCA)BtC(GCA)B CBP1P07252 654 aa4.61□□□□□ -1.67
tC(GCA)BtC(GCA)B FRD1P32614 470 aaKnown RBP4.61□□□□□ -1.67
tC(GCA)BtC(GCA)B FIR1P40020 876 aa4.61□□□□□ -1.67
tC(GCA)BtC(GCA)B PSF2P40359 213 aa4.61□□□□□ -1.67
tC(GCA)BtC(GCA)B YGL082WP53155 381 aa4.61□□□□□ -1.67
tC(GCA)BtC(GCA)B RAT1Q02792 1006 aaKnown RBP4.61□□□□□ -1.67
tC(GCA)BtC(GCA)B VPS62P53285 467 aa4.6□□□□□ -1.67
tC(GCA)BtC(GCA)B SAS4Q04003 481 aa4.6□□□□□ -1.67
tC(GCA)BtC(GCA)B GAS5Q08193 484 aa4.6□□□□□ -1.67
tC(GCA)BtC(GCA)B LYS2P07702 1392 aa4.6□□□□□ -1.67
tC(GCA)BtC(GCA)B LDH1P38139 375 aa4.59□□□□□ -1.67
tC(GCA)BtC(GCA)B NOP7P53261 605 aaKnown RBP4.59□□□□□ -1.67
tC(GCA)BtC(GCA)B UBP16Q02863 499 aa4.59□□□□□ -1.67
tC(GCA)BtC(GCA)B IKI3Q06706 1349 aaKnown RBP4.59□□□□□ -1.67
tC(GCA)BtC(GCA)B YML133CQ03099 1374 aa4.58□□□□□ -1.68
tC(GCA)BtC(GCA)B NUP145P49687 1317 aa4.58□□□□□ -1.68
tC(GCA)BtC(GCA)B PEX29Q03370 554 aa4.57□□□□□ -1.68
tC(GCA)BtC(GCA)B NSR1P27476 414 aaKnown RBP RIP-Chip data4.56□□□□□ -1.68not detected
tC(GCA)BtC(GCA)B SPR3P41901 512 aa4.56□□□□□ -1.68
tC(GCA)BtC(GCA)B YFR016CP43597 1233 aaKnown RBP4.56□□□□□ -1.68
tC(GCA)BtC(GCA)B KIP3P53086 805 aaKnown RBP4.56□□□□□ -1.68
tC(GCA)BtC(GCA)B SEN54Q02825 467 aaPredicted RBP4.56□□□□□ -1.68
tC(GCA)BtC(GCA)B WHI3P34761 661 aaKnown RBP4.55□□□□□ -1.68
tC(GCA)BtC(GCA)B YNR014WP53719 212 aa4.55□□□□□ -1.68
tC(GCA)BtC(GCA)B CRF1Q04930 467 aa4.55□□□□□ -1.68
tC(GCA)BtC(GCA)B ECM30Q06673 1274 aa4.55□□□□□ -1.68
tC(GCA)BtC(GCA)B NOP53Q12080 455 aaKnown RBP4.55□□□□□ -1.68
tC(GCA)BtC(GCA)B RRG1Q12167 365 aaPredicted RBP4.55□□□□□ -1.68
tC(GCA)BtC(GCA)B FLO11P08640 1367 aa4.54□□□□□ -1.68
tC(GCA)BtC(GCA)B GSM1P42950 618 aa4.54□□□□□ -1.68
tC(GCA)BtC(GCA)B YPL034WQ03083 165 aa4.54□□□□□ -1.68
tC(GCA)BtC(GCA)B RMT2Q03305 412 aa4.54□□□□□ -1.68
tC(GCA)BtC(GCA)B DIB1Q06819 143 aaPredicted RBP4.54□□□□□ -1.68
tC(GCA)BtC(GCA)B SEN1Q00416 2231 aaKnown RBP4.54□□□□□ -1.68
tC(GCA)BtC(GCA)B IRA2P19158 3079 aa4.53□□□□□ -1.68
tC(GCA)BtC(GCA)B IXR1P33417 597 aa4.52□□□□□ -1.69
tC(GCA)BtC(GCA)B KTR4P38131 464 aa4.52□□□□□ -1.69
tC(GCA)BtC(GCA)B TIF4632P39936 914 aaKnown RBP4.52□□□□□ -1.69
tC(GCA)BtC(GCA)B SYF1Q04048 859 aaPredicted RBP4.52□□□□□ -1.69
tC(GCA)BtC(GCA)B PHM7Q12252 991 aa4.52□□□□□ -1.69
tC(GCA)BtC(GCA)B FLO1P32768 1537 aa4.51□□□□□ -1.69
tC(GCA)BtC(GCA)B DCD1P06773 312 aa4.51□□□□□ -1.69
tC(GCA)BtC(GCA)B ALE1Q08548 619 aa4.51□□□□□ -1.69
tC(GCA)BtC(GCA)B AUS1Q08409 1394 aa4.51□□□□□ -1.69
tC(GCA)BtC(GCA)B UIP5P36137 443 aa4.5□□□□□ -1.69
tC(GCA)BtC(GCA)B UTP7P40055 554 aaKnown RBP4.5□□□□□ -1.69
tC(GCA)BtC(GCA)B BUB1P41695 1021 aaKnown RBP RIP-Chip data4.5□□□□□ -1.69not detected
tC(GCA)BtC(GCA)B RTF1P53064 558 aa4.5□□□□□ -1.69
tC(GCA)BtC(GCA)B STM1P39015 273 aaKnown RBP4.49□□□□□ -1.69
tC(GCA)BtC(GCA)B VID30P53076 958 aa4.49□□□□□ -1.69
tC(GCA)BtC(GCA)B MDG1P53885 366 aa4.49□□□□□ -1.69
tC(GCA)BtC(GCA)B HIM1Q06674 414 aa4.49□□□□□ -1.69
tC(GCA)BtC(GCA)B YOR131CQ12486 218 aa4.49□□□□□ -1.69
tC(GCA)BtC(GCA)B SEC3P33332 1336 aaKnown RBP4.48□□□□□ -1.69
tC(GCA)BtC(GCA)B PFK2P16862 959 aaKnown RBP RIP-Chip data4.48□□□□□ -1.69not detected
tC(GCA)BtC(GCA)B PDI1P17967 522 aaKnown RBP4.48□□□□□ -1.69
tC(GCA)BtC(GCA)B DSF2P38213 736 aa4.48□□□□□ -1.69
tC(GCA)BtC(GCA)B ERG7P38604 731 aa4.48□□□□□ -1.69
tC(GCA)BtC(GCA)B YFL040WP43562 540 aa4.48□□□□□ -1.69
tC(GCA)BtC(GCA)B MTC3P53077 123 aa4.48□□□□□ -1.69
tC(GCA)BtC(GCA)B ATG1P53104 897 aa4.48□□□□□ -1.69
tC(GCA)BtC(GCA)B MAM3Q12296 706 aa4.48□□□□□ -1.69
tC(GCA)BtC(GCA)B TRP5P00931 707 aaKnown RBP4.47□□□□□ -1.69
tC(GCA)BtC(GCA)B ARG8P18544 423 aa4.47□□□□□ -1.69
tC(GCA)BtC(GCA)B DBP1P24784 617 aaKnown RBP4.47□□□□□ -1.69
tC(GCA)BtC(GCA)B NIT1P40447 199 aa4.47□□□□□ -1.69
tC(GCA)BtC(GCA)B BRE5P53741 515 aaKnown RBP4.47□□□□□ -1.69
tC(GCA)BtC(GCA)B GIN4Q12263 1142 aa4.47□□□□□ -1.69
tC(GCA)BtC(GCA)B UBR2Q07963 1872 aa4.46□□□□□ -1.7
tC(GCA)BtC(GCA)B GAL2P13181 574 aa4.46□□□□□ -1.7
tC(GCA)BtC(GCA)B APL2P36000 726 aaPredicted RBP4.46□□□□□ -1.7
tC(GCA)BtC(GCA)B BOI1P38041 980 aaKnown RBP4.46□□□□□ -1.7
tC(GCA)BtC(GCA)B MSC7P38694 644 aa4.46□□□□□ -1.7
tC(GCA)BtC(GCA)B AFG3P39925 761 aa4.46□□□□□ -1.7
tC(GCA)BtC(GCA)B ORC1P54784 914 aaPredicted RBP4.46□□□□□ -1.7
tC(GCA)BtC(GCA)B DAP1Q12091 152 aa4.46□□□□□ -1.7
tC(GCA)BtC(GCA)B KRE2P27809 442 aa4.45□□□□□ -1.7
tC(GCA)BtC(GCA)B KTR2P33550 425 aa4.45□□□□□ -1.7
tC(GCA)BtC(GCA)B PRY3P47033 881 aa4.45□□□□□ -1.7
tC(GCA)BtC(GCA)B DSD1P53095 428 aa4.45□□□□□ -1.7
tC(GCA)BtC(GCA)B PPM2Q08282 695 aa4.45□□□□□ -1.7
tC(GCA)BtC(GCA)B MIP1P15801 1254 aa4.44□□□□□ -1.7
tC(GCA)BtC(GCA)B RPS7AP26786 190 aaKnown RBP4.44□□□□□ -1.7
tC(GCA)BtC(GCA)B RPT4P53549 437 aaKnown RBP4.44□□□□□ -1.7
tC(GCA)BtC(GCA)B TOS4Q06266 489 aa4.44□□□□□ -1.7
tC(GCA)BtC(GCA)B SUT2Q12286 268 aa4.44□□□□□ -1.7
tC(GCA)BtC(GCA)B HAT1Q12341 374 aa4.44□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 7.5 ms