RNA–Protein interactions for RNA: snR53

snR53, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR53, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR53snR53 AI3P03877 415 aa2.2□□□□□ -2.06
snR53snR53 SAC7P17121 654 aa2.2□□□□□ -2.06
snR53snR53 MRPL16P38064 232 aa2.2□□□□□ -2.06
snR53snR53 YLR122CQ12312 125 aa2.2□□□□□ -2.06
snR53snR53 YGR130CP53278 816 aa2.19□□□□□ -2.06
snR53snR53 PGM2P37012 569 aaKnown RBP2.18□□□□□ -2.06
snR53snR53 ALG14P38242 237 aa2.18□□□□□ -2.06
snR53snR53 GIP4P39732 760 aa2.18□□□□□ -2.06
snR53snR53 TAF1P46677 1066 aa2.18□□□□□ -2.06
snR53snR53 ISU1Q03020 165 aa2.18□□□□□ -2.06
snR53snR53 MAG2Q06436 670 aaKnown RBP2.18□□□□□ -2.06
snR53snR53 NAB2P32505 525 aaKnown RBP RIP-Chip data2.17□□□□□ -2.06not detected
snR53snR53 SEG2P34250 1132 aa2.17□□□□□ -2.06
snR53snR53 FIG4P42837 879 aa2.17□□□□□ -2.06
snR53snR53 ARI1P53111 347 aaKnown RBP2.17□□□□□ -2.06
snR53snR53 STB3Q12427 513 aa2.17□□□□□ -2.06
snR53snR53 RPP2BP02400 110 aaKnown RBP2.16□□□□□ -2.06
snR53snR53 FRA1Q07825 749 aa2.16□□□□□ -2.06
snR53snR53 MMP1Q12372 583 aa2.14□□□□□ -2.07
snR53snR53 CYC7P00045 113 aa2.13□□□□□ -2.07
snR53snR53 CHS2P14180 963 aa2.13□□□□□ -2.07
snR53snR53 ALA1P40825 983 aaKnown RBP2.13□□□□□ -2.07
snR53snR53 SPR3P41901 512 aa2.13□□□□□ -2.07
snR53snR53 ATG20Q07528 640 aa2.13□□□□□ -2.07
snR53snR53 ESS1P22696 170 aa2.12□□□□□ -2.07
snR53snR53 IRE1P32361 1115 aa2.12□□□□□ -2.07
snR53snR53 RRM3P38766 723 aa2.12□□□□□ -2.07
snR53snR53 NIT1P40447 199 aa2.12□□□□□ -2.07
snR53snR53 HST2P53686 357 aa2.12□□□□□ -2.07
snR53snR53 NGR1P32831 672 aaKnown RBP2.11□□□□□ -2.07
snR53snR53 LRG1P35688 1017 aa2.11□□□□□ -2.07
snR53snR53 WTM2Q12206 467 aa2.11□□□□□ -2.07
snR53snR53 YJU3P28321 313 aa2.1□□□□□ -2.07
snR53snR53 UTP7P40055 554 aaKnown RBP2.1□□□□□ -2.07
snR53snR53 YML122CQ03207 126 aa2.1□□□□□ -2.07
snR53snR53 PBS2P08018 668 aa2.09□□□□□ -2.07
snR53snR53 DAT1P13483 248 aaKnown RBP2.09□□□□□ -2.07
snR53snR53 TEC1P18412 486 aa2.09□□□□□ -2.07
snR53snR53 SAF1P38352 637 aa2.09□□□□□ -2.07
snR53snR53 MSC7P38694 644 aa2.09□□□□□ -2.07
snR53snR53 JJJ2P46997 583 aa2.09□□□□□ -2.07
snR53snR53 PSH1Q12161 406 aa2.09□□□□□ -2.07
snR53snR53 GAS1P22146 559 aaKnown RBP2.08□□□□□ -2.08
snR53snR53 PDC6P26263 563 aaKnown RBP2.08□□□□□ -2.08
snR53snR53 SFA1P32771 386 aa2.08□□□□□ -2.08
snR53snR53 SHM1P37292 490 aaPredicted RBP2.08□□□□□ -2.08
snR53snR53 NAR1P23503 491 aaKnown RBP2.07□□□□□ -2.08
snR53snR53 GLN1P32288 370 aaKnown RBP2.07□□□□□ -2.08
snR53snR53 POL12P38121 705 aaPredicted RBP2.07□□□□□ -2.08
snR53snR53 PRP43P53131 767 aaKnown RBP2.07□□□□□ -2.08
snR53snR53 MCM16Q12262 181 aa2.07□□□□□ -2.08
snR53snR53 RSC6P25632 483 aa2.06□□□□□ -2.08
snR53snR53 SEA4P38164 1038 aa2.06□□□□□ -2.08
snR53snR53 RSC30P38781 883 aa2.06□□□□□ -2.08
snR53snR53 SPO74P45819 413 aa2.06□□□□□ -2.08
snR53snR53 HDA2Q06629 674 aa2.06□□□□□ -2.08
snR53snR53 YPR084WQ06821 456 aa2.06□□□□□ -2.08
snR53snR53 MAM3Q12296 706 aa2.06□□□□□ -2.08
snR53snR53 NAM7P30771 971 aaKnown RBP2.05□□□□□ -2.08
snR53snR53 AKR1P39010 764 aa2.05□□□□□ -2.08
snR53snR53 IES2P40154 320 aa2.05□□□□□ -2.08
snR53snR53 ECL1P48235 211 aa2.05□□□□□ -2.08
snR53snR53 GIS4Q04233 774 aa2.05□□□□□ -2.08
snR53snR53 SUM1P46676 1062 aa2.03□□□□□ -2.08
snR53snR53 SDH1Q00711 640 aa2.03□□□□□ -2.08
snR53snR53 PUF3Q07807 879 aaKnown RBP RIP-Chip data2.03□□□□□ -2.08not detected
snR53snR53 RPP1AP05318 106 aaPredicted RBP2.02□□□□□ -2.09
snR53snR53 UTR2P32623 467 aa2.02□□□□□ -2.09
snR53snR53 DFG16Q99234 619 aa2.02□□□□□ -2.09
snR53snR53 NFS1P25374 497 aa2.01□□□□□ -2.09
snR53snR53 TBS1P38114 1094 aa2.01□□□□□ -2.09
snR53snR53 ARG8P18544 423 aa2□□□□□ -2.09
snR53snR53 GUT2P32191 649 aa2□□□□□ -2.09
snR53snR53 PRK1P40494 810 aa2□□□□□ -2.09
snR53snR53 RPS31P05759 152 aaKnown RBP1.99□□□□□ -2.09
snR53snR53 FLR1P38124 548 aa1.99□□□□□ -2.09
snR53snR53 SPT2P06843 333 aaPredicted RBP1.98□□□□□ -2.09
snR53snR53 THI80P35202 319 aa1.98□□□□□ -2.09
snR53snR53 NUP42P49686 430 aaKnown RBP1.98□□□□□ -2.09
snR53snR53 PKH3Q03306 898 aaPredicted RBP1.98□□□□□ -2.09
snR53snR53 GSF2Q04697 403 aaKnown RBP1.98□□□□□ -2.09
snR53snR53 LEU1P07264 779 aaKnown RBP1.97□□□□□ -2.09
snR53snR53 YHL008CP38750 627 aa1.97□□□□□ -2.09
snR53snR53 YNR065CP53751 1116 aa1.97□□□□□ -2.09
snR53snR53 ISR1Q06098 443 aaKnown RBP1.97□□□□□ -2.09
snR53snR53 CDA2Q06703 312 aa1.97□□□□□ -2.09
snR53snR53 RGP1P16664 663 aa1.96□□□□□ -2.1
snR53snR53 HEH2Q03281 663 aa1.96□□□□□ -2.1
snR53snR53 ALD2P47771 506 aa1.95□□□□□ -2.1
snR53snR53 TY1A-NL1Q12391 440 aaKnown RBP1.95□□□□□ -2.1
snR53snR53 MSB1P21339 1137 aaKnown RBP1.94□□□□□ -2.1
snR53snR53 DIT2P21595 489 aa1.94□□□□□ -2.1
snR53snR53 SNM1P40993 198 aa1.93□□□□□ -2.1
snR53snR53 STE20Q03497 939 aaKnown RBP1.93□□□□□ -2.1
snR53snR53 REC8Q12188 680 aa1.93□□□□□ -2.1
snR53snR53 PNS1Q12412 539 aa1.93□□□□□ -2.1
snR53snR53 TSA1P34760 196 aaKnown RBP1.92□□□□□ -2.1
snR53snR53 GCD1P09032 578 aaPredicted RBP1.91□□□□□ -2.1
snR53snR53 ABZ1P37254 787 aaPredicted RBP1.91□□□□□ -2.1
snR53snR53 MSH6Q03834 1242 aa1.91□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 22.3 ms