RNA–Protein interactions for RNA: YPR111W

DBF20, Transcript of Ser/Thr kinase involved in late nuclear division, yeast

Gene DBF20, Length 1,695 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBF20	YPR111W	RPL34A	P87262	121 aa	Predicted RBP	4.83	□□□□□ -1.64
DBF20	YPR111W	GEF1	P37020	779 aa		4.83	□□□□□ -1.64
DBF20	YPR111W	SUM1	P46676	1062 aa		4.82	□□□□□ -1.64
DBF20	YPR111W	ROM1	P53046	1155 aa		4.82	□□□□□ -1.64
DBF20	YPR111W	CYT1	P07143	309 aa		4.81	□□□□□ -1.64
DBF20	YPR111W	UBP1	P25037	809 aa		4.81	□□□□□ -1.64
DBF20	YPR111W	CWH41	P53008	833 aa		4.81	□□□□□ -1.64
DBF20	YPR111W	TRS33	Q99394	268 aa		4.81	□□□□□ -1.64
DBF20	YPR111W	VTC4	P47075	721 aa		4.8	□□□□□ -1.64
DBF20	YPR111W	MSN5	P52918	1224 aa		4.8	□□□□□ -1.64
DBF20	YPR111W	UBP2	Q01476	1272 aa		4.8	□□□□□ -1.64
DBF20	YPR111W	YML083C	Q04526	418 aa		4.8	□□□□□ -1.64
DBF20	YPR111W	MCM1	P11746	286 aa		4.8	□□□□□ -1.64
DBF20	YPR111W	YJR098C	P47139	656 aa		4.8	□□□□□ -1.64
DBF20	YPR111W	DAL1	P32375	460 aa		4.79	□□□□□ -1.64
DBF20	YPR111W	NGR1	P32831	672 aa	Known RBP	4.79	□□□□□ -1.64
DBF20	YPR111W	DLD1	P32891	587 aa		4.79	□□□□□ -1.64
DBF20	YPR111W	UTP7	P40055	554 aa	Known RBP	4.79	□□□□□ -1.64
DBF20	YPR111W	ALA1	P40825	983 aa	Known RBP	4.79	□□□□□ -1.64
DBF20	YPR111W	GLY1	P37303	387 aa	Known RBP	4.78	□□□□□ -1.64
DBF20	YPR111W	YPQ2	Q06328	317 aa		4.78	□□□□□ -1.64
DBF20	YPR111W	SSN3	P39073	555 aa		4.77	□□□□□ -1.65
DBF20	YPR111W	CWC15	Q03772	175 aa	Known RBP	4.77	□□□□□ -1.65
DBF20	YPR111W	OPT2	Q06593	877 aa		4.77	□□□□□ -1.65
DBF20	YPR111W	SRS2	P12954	1174 aa		4.77	□□□□□ -1.65
DBF20	YPR111W	MET22	P32179	357 aa		4.77	□□□□□ -1.65
DBF20	YPR111W	CDC3	P32457	520 aa	Known RBP	4.77	□□□□□ -1.65
DBF20	YPR111W	AHP1	P38013	176 aa	Known RBP	4.77	□□□□□ -1.65
DBF20	YPR111W	YDR444W	Q04093	687 aa		4.77	□□□□□ -1.65
DBF20	YPR111W	PUN1	Q06991	263 aa		4.77	□□□□□ -1.65
DBF20	YPR111W	TCB1	Q12466	1186 aa		4.77	□□□□□ -1.65
DBF20	YPR111W	LCB5	Q06147	687 aa	Known RBP	4.76	□□□□□ -1.65
DBF20	YPR111W	SCW11	P53189	542 aa		4.75	□□□□□ -1.65
DBF20	YPR111W	SCD5	P34758	872 aa		4.74	□□□□□ -1.65
DBF20	YPR111W	JJJ2	P46997	583 aa		4.74	□□□□□ -1.65
DBF20	YPR111W	RRN6	P32786	894 aa		4.73	□□□□□ -1.65
DBF20	YPR111W	OSH7	P38755	437 aa		4.73	□□□□□ -1.65
DBF20	YPR111W	ALD4	P46367	519 aa	Known RBP	4.73	□□□□□ -1.65
DBF20	YPR111W	PNP1	Q05788	311 aa		4.73	□□□□□ -1.65
DBF20	YPR111W	UTP4	Q06679	776 aa	Known RBP	4.73	□□□□□ -1.65
DBF20	YPR111W	IRE1	P32361	1115 aa		4.73	□□□□□ -1.65
DBF20	YPR111W	SLA1	P32790	1244 aa		4.73	□□□□□ -1.65
DBF20	YPR111W	YTA6	P40328	754 aa		4.73	□□□□□ -1.65
DBF20	YPR111W	TY1A-BL	Q12266	440 aa		4.73	□□□□□ -1.65
DBF20	YPR111W	SUV3	P32580	737 aa		4.72	□□□□□ -1.65
DBF20	YPR111W	UBP15	P50101	1230 aa		4.72	□□□□□ -1.65
DBF20	YPR111W	CDC19	P00549	500 aa	Known RBP	4.71	□□□□□ -1.66
DBF20	YPR111W	Q0182	Q9ZZW1	134 aa		4.71	□□□□□ -1.66
DBF20	YPR111W	FUR4	P05316	633 aa	Known RBP	4.7	□□□□□ -1.66
DBF20	YPR111W	YBR197C	P38306	217 aa		4.7	□□□□□ -1.66
DBF20	YPR111W	HXT5	P38695	592 aa		4.7	□□□□□ -1.66
DBF20	YPR111W	RGA1	P39083	1007 aa		4.7	□□□□□ -1.66
DBF20	YPR111W	YML020W	Q03722	664 aa		4.7	□□□□□ -1.66
DBF20	YPR111W	GBP2	P25555	427 aa	Known RBP RIP-Chip data	4.7	□□□□□ -1.66	not detected
DBF20	YPR111W	ACO2	P39533	789 aa		4.7	□□□□□ -1.66
DBF20	YPR111W	GAR1	P28007	205 aa	Known RBP	4.69	□□□□□ -1.66
DBF20	YPR111W	CAB1	Q04430	367 aa		4.69	□□□□□ -1.66
DBF20	YPR111W	KAR5	Q04746	504 aa		4.69	□□□□□ -1.66
DBF20	YPR111W	NOP8	Q08287	484 aa	Predicted RBP	4.69	□□□□□ -1.66
DBF20	YPR111W	TY1A-DR3	Q12441	440 aa		4.69	□□□□□ -1.66
DBF20	YPR111W	RPP1A	P05318	106 aa	Predicted RBP	4.68	□□□□□ -1.66
DBF20	YPR111W	RPS31	P05759	152 aa	Known RBP	4.68	□□□□□ -1.66
DBF20	YPR111W	SHM1	P37292	490 aa	Predicted RBP	4.68	□□□□□ -1.66
DBF20	YPR111W	TPS3	P38426	1054 aa	Known RBP	4.68	□□□□□ -1.66
DBF20	YPR111W	LSO1	Q3E827	93 aa		4.68	□□□□□ -1.66
DBF20	YPR111W	LEU1	P07264	779 aa	Known RBP	4.67	□□□□□ -1.66
DBF20	YPR111W	MRPL33	P20084	86 aa		4.67	□□□□□ -1.66
DBF20	YPR111W	PDC6	P26263	563 aa	Known RBP	4.67	□□□□□ -1.66
DBF20	YPR111W	MLF3	P32047	452 aa		4.67	□□□□□ -1.66
DBF20	YPR111W	ISC10	P32645	267 aa		4.67	□□□□□ -1.66
DBF20	YPR111W	YNL165W	P53891	406 aa		4.67	□□□□□ -1.66
DBF20	YPR111W	FOX2	Q02207	900 aa	Known RBP	4.67	□□□□□ -1.66
DBF20	YPR111W	KAP122	P32767	1081 aa		4.67	□□□□□ -1.66
DBF20	YPR111W	TY1A-MR1	Q04215	440 aa		4.67	□□□□□ -1.66
DBF20	YPR111W	PSH1	Q12161	406 aa		4.67	□□□□□ -1.66
DBF20	YPR111W	LDH1	P38139	375 aa		4.66	□□□□□ -1.66
DBF20	YPR111W	YBR287W	P38355	427 aa		4.66	□□□□□ -1.66
DBF20	YPR111W	ROG3	P43602	733 aa		4.66	□□□□□ -1.66
DBF20	YPR111W	HAT1	Q12341	374 aa		4.66	□□□□□ -1.66
DBF20	YPR111W	VMA3	P25515	160 aa		4.65	□□□□□ -1.66
DBF20	YPR111W	DYS1	P38791	387 aa		4.65	□□□□□ -1.66
DBF20	YPR111W	ACF4	P47129	309 aa		4.65	□□□□□ -1.66
DBF20	YPR111W	MTO1	P53070	669 aa		4.65	□□□□□ -1.66
DBF20	YPR111W	ATG1	P53104	897 aa		4.65	□□□□□ -1.66
DBF20	YPR111W	NAM8	Q00539	523 aa	Known RBP	4.65	□□□□□ -1.66
DBF20	YPR111W	BOL3	P39724	118 aa		4.64	□□□□□ -1.67
DBF20	YPR111W	SPR3	P41901	512 aa		4.64	□□□□□ -1.67
DBF20	YPR111W	CAF120	P53836	1060 aa		4.64	□□□□□ -1.67
DBF20	YPR111W	RGP1	P16664	663 aa		4.64	□□□□□ -1.67
DBF20	YPR111W	DIT1	P21623	536 aa		4.64	□□□□□ -1.67
DBF20	YPR111W	SLD2	P34252	453 aa		4.64	□□□□□ -1.67
DBF20	YPR111W	YIR007W	P40566	764 aa		4.64	□□□□□ -1.67
DBF20	YPR111W	YMR265C	Q03508	461 aa	Known RBP	4.64	□□□□□ -1.67
DBF20	YPR111W	APC11	Q12157	165 aa		4.64	□□□□□ -1.67
DBF20	YPR111W	MRPL16	P38064	232 aa		4.63	□□□□□ -1.67
DBF20	YPR111W	SSF1	P38789	453 aa	Predicted RBP	4.63	□□□□□ -1.67
DBF20	YPR111W	QDR2	P40474	542 aa		4.63	□□□□□ -1.67
DBF20	YPR111W	ALD2	P47771	506 aa		4.63	□□□□□ -1.67
DBF20	YPR111W	SKP1	P52286	194 aa		4.63	□□□□□ -1.67
DBF20	YPR111W	YBL113C	Q7M4S9	792 aa		4.63	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 86.5 ms