RNA–Protein interactions for RNA: YPL083C

SEN54, Transcript of Subunit of the tRNA splicing endonuclease, yeast

Gene SEN54, Length 1,404 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEN54	YPL083C	DAT1	P13483	248 aa	Known RBP	5.37	□□□□□ -1.55
SEN54	YPL083C	SLX8	P40072	274 aa		5.37	□□□□□ -1.55
SEN54	YPL083C	SUM1	P46676	1062 aa		5.37	□□□□□ -1.55
SEN54	YPL083C	TFB3	Q03290	321 aa		5.37	□□□□□ -1.55
SEN54	YPL083C	AHP1	P38013	176 aa	Known RBP	5.36	□□□□□ -1.55
SEN54	YPL083C	BIO2	P32451	375 aa		5.35	□□□□□ -1.55
SEN54	YPL083C	ADE12	P80210	433 aa	Known RBP	5.35	□□□□□ -1.55
SEN54	YPL083C	JJJ2	P46997	583 aa		5.34	□□□□□ -1.55
SEN54	YPL083C	KRE33	P53914	1056 aa	Known RBP	5.34	□□□□□ -1.55
SEN54	YPL083C	HDA3	Q06623	655 aa		5.34	□□□□□ -1.55
SEN54	YPL083C	THI72	Q08579	599 aa		5.34	□□□□□ -1.55
SEN54	YPL083C	PKC1	P24583	1151 aa		5.33	□□□□□ -1.56
SEN54	YPL083C	SOH1	P38633	127 aa		5.33	□□□□□ -1.56
SEN54	YPL083C	TAF7	Q05021	590 aa		5.33	□□□□□ -1.56
SEN54	YPL083C	CCT8	P47079	568 aa	Known RBP	5.32	□□□□□ -1.56
SEN54	YPL083C	IRE1	P32361	1115 aa		5.31	□□□□□ -1.56
SEN54	YPL083C	UTP7	P40055	554 aa	Known RBP	5.31	□□□□□ -1.56
SEN54	YPL083C	RIM21	P48565	533 aa		5.31	□□□□□ -1.56
SEN54	YPL083C	YPQ2	Q06328	317 aa		5.31	□□□□□ -1.56
SEN54	YPL083C	ENO2	P00925	437 aa	Known RBP	5.31	□□□□□ -1.56
SEN54	YPL083C	SHM1	P37292	490 aa	Predicted RBP	5.31	□□□□□ -1.56
SEN54	YPL083C	YPR053C	Q6Q5F3	151 aa		5.3	□□□□□ -1.56
SEN54	YPL083C	GPM1	P00950	247 aa	Known RBP	5.29	□□□□□ -1.56
SEN54	YPL083C	SKN7	P38889	622 aa		5.29	□□□□□ -1.56
SEN54	YPL083C	ALA1	P40825	983 aa	Known RBP	5.29	□□□□□ -1.56
SEN54	YPL083C	RDS2	P19541	446 aa	Known RBP	5.28	□□□□□ -1.56
SEN54	YPL083C	PDC6	P26263	563 aa	Known RBP	5.28	□□□□□ -1.56
SEN54	YPL083C	YNL108C	P53929	270 aa		5.28	□□□□□ -1.56
SEN54	YPL083C	PSH1	Q12161	406 aa		5.28	□□□□□ -1.56
SEN54	YPL083C	RPS31	P05759	152 aa	Known RBP	5.27	□□□□□ -1.57
SEN54	YPL083C	MCM1	P11746	286 aa		5.27	□□□□□ -1.57
SEN54	YPL083C	MCX1	P38323	520 aa	Predicted RBP	5.27	□□□□□ -1.57
SEN54	YPL083C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	5.27	□□□□□ -1.57	not detected
SEN54	YPL083C	SWI5	P08153	709 aa		5.26	□□□□□ -1.57
SEN54	YPL083C	FPS1	P23900	669 aa		5.26	□□□□□ -1.57
SEN54	YPL083C	SBE2	P42223	864 aa	Known RBP	5.26	□□□□□ -1.57
SEN54	YPL083C	TDA6	Q06466	467 aa		5.26	□□□□□ -1.57
SEN54	YPL083C	LEU1	P07264	779 aa	Known RBP	5.25	□□□□□ -1.57
SEN54	YPL083C	MRPL16	P38064	232 aa		5.25	□□□□□ -1.57
SEN54	YPL083C	YFL034W	P43564	1073 aa		5.25	□□□□□ -1.57
SEN54	YPL083C	MRX10	Q05648	414 aa		5.25	□□□□□ -1.57
SEN54	YPL083C	AIM9	P40053	627 aa	Known RBP	5.24	□□□□□ -1.57
SEN54	YPL083C	SPR3	P41901	512 aa		5.24	□□□□□ -1.57
SEN54	YPL083C	KNS1	P32350	737 aa	Predicted RBP	5.23	□□□□□ -1.57
SEN54	YPL083C	YMR187C	Q03236	431 aa		5.23	□□□□□ -1.57
SEN54	YPL083C	RPP1A	P05318	106 aa	Predicted RBP	5.23	□□□□□ -1.57
SEN54	YPL083C	STB3	Q12427	513 aa		5.23	□□□□□ -1.57
SEN54	YPL083C	RPS6A	P0CX37	236 aa	Known RBP	5.22	□□□□□ -1.57
SEN54	YPL083C	RPS6B	P0CX38	236 aa	Predicted RBP	5.22	□□□□□ -1.57
SEN54	YPL083C	PDC5	P16467	563 aa	Known RBP	5.22	□□□□□ -1.57
SEN54	YPL083C	ALD2	P47771	506 aa		5.22	□□□□□ -1.57
SEN54	YPL083C	TY1A-DR2	Q03964	440 aa	Known RBP	5.22	□□□□□ -1.57
SEN54	YPL083C	MET1	P36150	593 aa		5.21	□□□□□ -1.58
SEN54	YPL083C	YJL007C	P47080	104 aa		5.21	□□□□□ -1.58
SEN54	YPL083C	YNR014W	P53719	212 aa		5.21	□□□□□ -1.58
SEN54	YPL083C	YCK2	P23292	546 aa	Known RBP	5.2	□□□□□ -1.58
SEN54	YPL083C	PEP12	P32854	288 aa		5.2	□□□□□ -1.58
SEN54	YPL083C	TSC13	Q99190	310 aa		5.2	□□□□□ -1.58
SEN54	YPL083C	RGP1	P16664	663 aa		5.19	□□□□□ -1.58
SEN54	YPL083C	MSC7	P38694	644 aa		5.19	□□□□□ -1.58
SEN54	YPL083C	BOI2	P39969	1040 aa		5.19	□□□□□ -1.58
SEN54	YPL083C	YNL165W	P53891	406 aa		5.19	□□□□□ -1.58
SEN54	YPL083C	ENO1	P00924	437 aa	Known RBP	5.18	□□□□□ -1.58
SEN54	YPL083C	NTH2	P35172	780 aa		5.18	□□□□□ -1.58
SEN54	YPL083C	YDR215C	Q12240	137 aa		5.18	□□□□□ -1.58
SEN54	YPL083C	BIM1	P40013	344 aa		5.17	□□□□□ -1.58
SEN54	YPL083C	YTA6	P40328	754 aa		5.17	□□□□□ -1.58
SEN54	YPL083C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	5.17	□□□□□ -1.58	RIP-Chip
SEN54	YPL083C	TIF1	P10081	395 aa	Known RBP	5.16	□□□□□ -1.58
SEN54	YPL083C	ATG32	P40458	529 aa		5.16	□□□□□ -1.58
SEN54	YPL083C	HGH1	P48362	394 aa	Known RBP	5.16	□□□□□ -1.58
SEN54	YPL083C	UTP4	Q06679	776 aa	Known RBP	5.16	□□□□□ -1.58
SEN54	YPL083C	CYT1	P07143	309 aa		5.14	□□□□□ -1.59
SEN54	YPL083C	UBP1	P25037	809 aa		5.14	□□□□□ -1.59
SEN54	YPL083C	MLF3	P32047	452 aa		5.14	□□□□□ -1.59
SEN54	YPL083C	SKP1	P52286	194 aa		5.14	□□□□□ -1.59
SEN54	YPL083C	HEH2	Q03281	663 aa		5.14	□□□□□ -1.59
SEN54	YPL083C	PDI1	P17967	522 aa	Known RBP	5.14	□□□□□ -1.59
SEN54	YPL083C	RTG2	P32608	588 aa	Known RBP	5.14	□□□□□ -1.59
SEN54	YPL083C	AMN1	P38285	549 aa	Predicted RBP	5.13	□□□□□ -1.59
SEN54	YPL083C	SLN1	P39928	1220 aa	Predicted RBP	5.13	□□□□□ -1.59
SEN54	YPL083C	Q0182	Q9ZZW1	134 aa		5.13	□□□□□ -1.59
SEN54	YPL083C	SBP1	P10080	294 aa	Known RBP	5.12	□□□□□ -1.59
SEN54	YPL083C	PHO87	P25360	923 aa		5.12	□□□□□ -1.59
SEN54	YPL083C	SIS2	P36024	562 aa		5.12	□□□□□ -1.59
SEN54	YPL083C	RPL34B	P40525	121 aa	Known RBP	5.11	□□□□□ -1.59
SEN54	YPL083C	GAS4	Q08271	471 aa		5.11	□□□□□ -1.59
SEN54	YPL083C	HAP4	P14064	554 aa		5.1	□□□□□ -1.59
SEN54	YPL083C	SCD5	P34758	872 aa		5.1	□□□□□ -1.59
SEN54	YPL083C	TPS3	P38426	1054 aa	Known RBP	5.1	□□□□□ -1.59
SEN54	YPL083C	ACS2	P52910	683 aa	Known RBP	5.1	□□□□□ -1.59
SEN54	YPL083C	NGR1	P32831	672 aa	Known RBP	5.09	□□□□□ -1.59
SEN54	YPL083C	TAT1	P38085	619 aa		5.09	□□□□□ -1.59
SEN54	YPL083C	HXT5	P38695	592 aa		5.09	□□□□□ -1.59
SEN54	YPL083C	PRK1	P40494	810 aa		5.09	□□□□□ -1.59
SEN54	YPL083C	LSB6	P42951	607 aa		5.09	□□□□□ -1.59
SEN54	YPL083C	NHA1	Q99271	985 aa		5.08	□□□□□ -1.6
SEN54	YPL083C	KAP122	P32767	1081 aa		5.07	□□□□□ -1.6
SEN54	YPL083C	NCL1	P38205	684 aa	Known RBP	5.07	□□□□□ -1.6
SEN54	YPL083C	MCA1	Q08601	432 aa		5.07	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 29.5 ms