RNA–Protein interactions for RNA: YOR261C

RPN8, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN8, Length 1,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN8YOR261C NSG2P53898 299 aa7.91□□□□□ -1.14
RPN8YOR261C ISU1Q03020 165 aa7.9□□□□□ -1.14
RPN8YOR261C STE6P12866 1290 aa7.89□□□□□ -1.15
RPN8YOR261C CPS1P27614 576 aa7.89□□□□□ -1.15
RPN8YOR261C THI72Q08579 599 aa7.88□□□□□ -1.15
RPN8YOR261C NRD1P53617 575 aaKnown RBP RIP-Chip data7.86□□□□□ -1.15not detected
RPN8YOR261C HDA3Q06623 655 aa7.86□□□□□ -1.15
RPN8YOR261C SPT2P06843 333 aaPredicted RBP7.85□□□□□ -1.15
RPN8YOR261C TGL4P36165 910 aa7.85□□□□□ -1.15
RPN8YOR261C CCT8P47079 568 aaKnown RBP7.85□□□□□ -1.15
RPN8YOR261C BDS1Q08347 646 aa7.85□□□□□ -1.15
RPN8YOR261C SSA4P22202 642 aaKnown RBP7.84□□□□□ -1.15
RPN8YOR261C KTR7P40504 517 aa7.84□□□□□ -1.15
RPN8YOR261C CUZ1P53899 274 aa7.84□□□□□ -1.15
RPN8YOR261C CBC2Q08920 208 aaKnown RBP RIP-Chip data7.84□□□□□ -1.15not detected
RPN8YOR261C SUB2Q07478 446 aaKnown RBP7.83□□□□□ -1.16
RPN8YOR261C PUP1P25043 261 aa7.82□□□□□ -1.16
RPN8YOR261C AI1P03875 834 aa7.8□□□□□ -1.16
RPN8YOR261C GAL2P13181 574 aa7.8□□□□□ -1.16
RPN8YOR261C UTR2P32623 467 aa7.8□□□□□ -1.16
RPN8YOR261C VTC4P47075 721 aa7.8□□□□□ -1.16
RPN8YOR261C NOB1Q08444 459 aaKnown RBP7.8□□□□□ -1.16
RPN8YOR261C WTM2Q12206 467 aa7.8□□□□□ -1.16
RPN8YOR261C TSC13Q99190 310 aa7.8□□□□□ -1.16
RPN8YOR261C DAT1P13483 248 aaKnown RBP7.79□□□□□ -1.16
RPN8YOR261C PHO87P25360 923 aa7.79□□□□□ -1.16
RPN8YOR261C SLX8P40072 274 aa7.79□□□□□ -1.16
RPN8YOR261C RPP2BP02400 110 aaKnown RBP7.78□□□□□ -1.16
RPN8YOR261C PDI1P17967 522 aaKnown RBP7.78□□□□□ -1.16
RPN8YOR261C ACS2P52910 683 aaKnown RBP7.78□□□□□ -1.16
RPN8YOR261C AIM9P40053 627 aaKnown RBP7.77□□□□□ -1.17
RPN8YOR261C YFL034WP43564 1073 aa7.77□□□□□ -1.17
RPN8YOR261C ECM23Q02710 187 aa7.77□□□□□ -1.17
RPN8YOR261C HAP4P14064 554 aa7.76□□□□□ -1.17
RPN8YOR261C TBS1P38114 1094 aa7.76□□□□□ -1.17
RPN8YOR261C NTH2P35172 780 aa7.75□□□□□ -1.17
RPN8YOR261C YML083CQ04526 418 aa7.75□□□□□ -1.17
RPN8YOR261C SWI5P08153 709 aa7.74□□□□□ -1.17
RPN8YOR261C DAL1P32375 460 aa7.74□□□□□ -1.17
RPN8YOR261C CEM1P39525 442 aa7.74□□□□□ -1.17
RPN8YOR261C DLD3P39976 496 aaKnown RBP7.73□□□□□ -1.17
RPN8YOR261C ROM1P53046 1155 aa7.73□□□□□ -1.17
RPN8YOR261C RPS6AP0CX37 236 aaKnown RBP7.72□□□□□ -1.17
RPN8YOR261C RPS6BP0CX38 236 aaPredicted RBP7.72□□□□□ -1.17
RPN8YOR261C GAS4Q08271 471 aa7.72□□□□□ -1.17
RPN8YOR261C SBE2P42223 864 aaKnown RBP7.71□□□□□ -1.18
RPN8YOR261C YPR053CQ6Q5F3 151 aa7.71□□□□□ -1.18
RPN8YOR261C UBX7P38349 436 aa7.7□□□□□ -1.18
RPN8YOR261C SUM1P46676 1062 aa7.7□□□□□ -1.18
RPN8YOR261C SSN3P39073 555 aa7.69□□□□□ -1.18
RPN8YOR261C UTP7P40055 554 aaKnown RBP7.69□□□□□ -1.18
RPN8YOR261C SYT1Q06836 1226 aa7.69□□□□□ -1.18
RPN8YOR261C SKN7P38889 622 aa7.68□□□□□ -1.18
RPN8YOR261C YPQ2Q06328 317 aa7.68□□□□□ -1.18
RPN8YOR261C CYT1P07143 309 aa7.67□□□□□ -1.18
RPN8YOR261C TDA6Q06466 467 aa7.67□□□□□ -1.18
RPN8YOR261C SSA1P10591 642 aaKnown RBP7.66□□□□□ -1.18
RPN8YOR261C UBP1P25037 809 aa7.66□□□□□ -1.18
RPN8YOR261C DIT1P21623 536 aa7.65□□□□□ -1.18
RPN8YOR261C MSN5P52918 1224 aa7.65□□□□□ -1.18
RPN8YOR261C ADE12P80210 433 aaKnown RBP7.65□□□□□ -1.18
RPN8YOR261C YMR265CQ03508 461 aaKnown RBP7.65□□□□□ -1.18
RPN8YOR261C VAN1P23642 535 aa7.64□□□□□ -1.19
RPN8YOR261C SLA1P32790 1244 aa7.64□□□□□ -1.19
RPN8YOR261C PUF6Q04373 656 aaKnown RBP7.64□□□□□ -1.19
RPN8YOR261C TY1A-DR3Q12441 440 aa7.64□□□□□ -1.19
RPN8YOR261C NGR1P32831 672 aaKnown RBP7.63□□□□□ -1.19
RPN8YOR261C UBP15P50101 1230 aa7.63□□□□□ -1.19
RPN8YOR261C CWC15Q03772 175 aaKnown RBP7.63□□□□□ -1.19
RPN8YOR261C SBP1P10080 294 aaKnown RBP7.62□□□□□ -1.19
RPN8YOR261C MCM1P11746 286 aa7.62□□□□□ -1.19
RPN8YOR261C KRE33P53914 1056 aaKnown RBP7.62□□□□□ -1.19
RPN8YOR261C SUV3P32580 737 aa7.61□□□□□ -1.19
RPN8YOR261C ALA1P40825 983 aaKnown RBP7.61□□□□□ -1.19
RPN8YOR261C YMR187CQ03236 431 aa7.61□□□□□ -1.19
RPN8YOR261C GEF1P37020 779 aa7.6□□□□□ -1.19
RPN8YOR261C YDR461C-AQ2V2P7 80 aa7.6□□□□□ -1.19
RPN8YOR261C TRS33Q99394 268 aa7.59□□□□□ -1.19
RPN8YOR261C SHM1P37292 490 aaPredicted RBP7.58□□□□□ -1.2
RPN8YOR261C JJJ2P46997 583 aa7.58□□□□□ -1.2
RPN8YOR261C RPL34AP87262 121 aaPredicted RBP7.58□□□□□ -1.2
RPN8YOR261C RPS31P05759 152 aaKnown RBP7.57□□□□□ -1.2
RPN8YOR261C PUN1Q06991 263 aa7.57□□□□□ -1.2
RPN8YOR261C YCK2P23292 546 aaKnown RBP7.56□□□□□ -1.2
RPN8YOR261C IRE1P32361 1115 aa7.56□□□□□ -1.2
RPN8YOR261C TPS3P38426 1054 aaKnown RBP7.56□□□□□ -1.2
RPN8YOR261C HXT5P38695 592 aa7.56□□□□□ -1.2
RPN8YOR261C CWH41P53008 833 aa7.56□□□□□ -1.2
RPN8YOR261C YNL165WP53891 406 aa7.56□□□□□ -1.2
RPN8YOR261C SRS2P12954 1174 aa7.55□□□□□ -1.2
RPN8YOR261C AHP1P38013 176 aaKnown RBP7.55□□□□□ -1.2
RPN8YOR261C GLT1Q12680 2145 aaKnown RBP7.54□□□□□ -1.2
RPN8YOR261C ALD4P46367 519 aaKnown RBP7.54□□□□□ -1.2
RPN8YOR261C PNP1Q05788 311 aa7.53□□□□□ -1.2
RPN8YOR261C Q0182Q9ZZW1 134 aa7.53□□□□□ -1.2
RPN8YOR261C YBR197CP38306 217 aa7.52□□□□□ -1.21
RPN8YOR261C MCX1P38323 520 aaPredicted RBP7.52□□□□□ -1.21
RPN8YOR261C YNR014WP53719 212 aa7.52□□□□□ -1.21
RPN8YOR261C CAB1Q04430 367 aa7.52□□□□□ -1.21
RPN8YOR261C PSH1Q12161 406 aa7.51□□□□□ -1.21
Retrieved 100 of 5,963 RNA–protein pairs in 72.1 ms