RNA–Protein interactions for RNA: YOR198C

BFR1, Transcript of Component of mRNP complexes associated with polyribosomes, yeast

Gene BFR1, Length 1,413 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BFR1	YOR198C	HDA3	Q06623	655 aa		5.12	□□□□□ -1.59
BFR1	YOR198C	RDS2	P19541	446 aa	Known RBP	5.11	□□□□□ -1.59
BFR1	YOR198C	AHP1	P38013	176 aa	Known RBP	5.11	□□□□□ -1.59
BFR1	YOR198C	RPL34B	P40525	121 aa	Known RBP	5.11	□□□□□ -1.59
BFR1	YOR198C	UBP15	P50101	1230 aa		5.11	□□□□□ -1.59
BFR1	YOR198C	LYS5	P50113	272 aa		5.11	□□□□□ -1.59
BFR1	YOR198C	TIF1	P10081	395 aa	Known RBP	5.1	□□□□□ -1.59
BFR1	YOR198C	ATG32	P40458	529 aa		5.1	□□□□□ -1.59
BFR1	YOR198C	SUM1	P46676	1062 aa		5.1	□□□□□ -1.59
BFR1	YOR198C	JJJ3	P47138	172 aa		5.1	□□□□□ -1.59
BFR1	YOR198C	SLA1	P32790	1244 aa		5.09	□□□□□ -1.59
BFR1	YOR198C	CUZ1	P53899	274 aa		5.09	□□□□□ -1.59
BFR1	YOR198C	TY1A-DR3	Q12441	440 aa		5.09	□□□□□ -1.59
BFR1	YOR198C	ENO1	P00924	437 aa	Known RBP	5.08	□□□□□ -1.6
BFR1	YOR198C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	5.08	□□□□□ -1.6	not detected
BFR1	YOR198C	MRX10	Q05648	414 aa		5.08	□□□□□ -1.6
BFR1	YOR198C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	5.08	□□□□□ -1.6	not detected
BFR1	YOR198C	RTG2	P32608	588 aa	Known RBP	5.07	□□□□□ -1.6
BFR1	YOR198C	AIM9	P40053	627 aa	Known RBP	5.07	□□□□□ -1.6
BFR1	YOR198C	ALA1	P40825	983 aa	Known RBP	5.07	□□□□□ -1.6
BFR1	YOR198C	MDJ1	P35191	511 aa		5.06	□□□□□ -1.6
BFR1	YOR198C	CEM1	P39525	442 aa		5.06	□□□□□ -1.6
BFR1	YOR198C	JJJ2	P46997	583 aa		5.06	□□□□□ -1.6
BFR1	YOR198C	YFL034W	P43564	1073 aa		5.06	□□□□□ -1.6
BFR1	YOR198C	YMR265C	Q03508	461 aa	Known RBP	5.06	□□□□□ -1.6
BFR1	YOR198C	SWI5	P08153	709 aa		5.05	□□□□□ -1.6
BFR1	YOR198C	DIT1	P21623	536 aa		5.05	□□□□□ -1.6
BFR1	YOR198C	YPQ2	Q06328	317 aa		5.04	□□□□□ -1.6
BFR1	YOR198C	RPS6A	P0CX37	236 aa	Known RBP	5.03	□□□□□ -1.6
BFR1	YOR198C	RPS6B	P0CX38	236 aa	Predicted RBP	5.03	□□□□□ -1.6
BFR1	YOR198C	IRE1	P32361	1115 aa		5.03	□□□□□ -1.6
BFR1	YOR198C	SHM1	P37292	490 aa	Predicted RBP	5.03	□□□□□ -1.6
BFR1	YOR198C	PEP12	P32854	288 aa		5.02	□□□□□ -1.61
BFR1	YOR198C	NSG2	P53898	299 aa		5.02	□□□□□ -1.61
BFR1	YOR198C	SYT1	Q06836	1226 aa		5.02	□□□□□ -1.61
BFR1	YOR198C	KRE33	P53914	1056 aa	Known RBP	5.01	□□□□□ -1.61
BFR1	YOR198C	YDR461C-A	Q2V2P7	80 aa		5.01	□□□□□ -1.61
BFR1	YOR198C	MCM1	P11746	286 aa		5	□□□□□ -1.61
BFR1	YOR198C	PDI1	P17967	522 aa	Known RBP	5	□□□□□ -1.61
BFR1	YOR198C	PDC6	P26263	563 aa	Known RBP	5	□□□□□ -1.61
BFR1	YOR198C	NTH2	P35172	780 aa		5	□□□□□ -1.61
BFR1	YOR198C	SIS2	P36024	562 aa		5	□□□□□ -1.61
BFR1	YOR198C	CCT8	P47079	568 aa	Known RBP	5	□□□□□ -1.61
BFR1	YOR198C	PSH1	Q12161	406 aa		5	□□□□□ -1.61
BFR1	YOR198C	TSC13	Q99190	310 aa		5	□□□□□ -1.61
BFR1	YOR198C	ADE12	P80210	433 aa	Known RBP	4.99	□□□□□ -1.61
BFR1	YOR198C	AI1	P03875	834 aa		4.98	□□□□□ -1.61
BFR1	YOR198C	CYT1	P07143	309 aa		4.98	□□□□□ -1.61
BFR1	YOR198C	KTR7	P40504	517 aa		4.98	□□□□□ -1.61
BFR1	YOR198C	RPS31	P05759	152 aa	Known RBP	4.97	□□□□□ -1.61
BFR1	YOR198C	PHO87	P25360	923 aa		4.97	□□□□□ -1.61
BFR1	YOR198C	THI72	Q08579	599 aa		4.97	□□□□□ -1.61
BFR1	YOR198C	STB3	Q12427	513 aa		4.97	□□□□□ -1.61
BFR1	YOR198C	YTA6	P40328	754 aa		4.97	□□□□□ -1.61
BFR1	YOR198C	DMA2	P53924	522 aa		4.97	□□□□□ -1.61
BFR1	YOR198C	HAP4	P14064	554 aa		4.96	□□□□□ -1.62
BFR1	YOR198C	FPS1	P23900	669 aa		4.96	□□□□□ -1.62
BFR1	YOR198C	MRPL16	P38064	232 aa		4.96	□□□□□ -1.62
BFR1	YOR198C	YFL066C	P43538	392 aa		4.96	□□□□□ -1.62
BFR1	YOR198C	ACS2	P52910	683 aa	Known RBP	4.96	□□□□□ -1.62
BFR1	YOR198C	GAS4	Q08271	471 aa		4.96	□□□□□ -1.62
BFR1	YOR198C	LEU1	P07264	779 aa	Known RBP	4.95	□□□□□ -1.62
BFR1	YOR198C	YNL165W	P53891	406 aa		4.95	□□□□□ -1.62
BFR1	YOR198C	UBP1	P25037	809 aa		4.94	□□□□□ -1.62
BFR1	YOR198C	MLF3	P32047	452 aa		4.94	□□□□□ -1.62
BFR1	YOR198C	ALD2	P47771	506 aa		4.94	□□□□□ -1.62
BFR1	YOR198C	RPP1A	P05318	106 aa	Predicted RBP	4.93	□□□□□ -1.62
BFR1	YOR198C	GPM1	P00950	247 aa	Known RBP	4.92	□□□□□ -1.62
BFR1	YOR198C	GAL2	P13181	574 aa		4.92	□□□□□ -1.62
BFR1	YOR198C	SPR3	P41901	512 aa		4.92	□□□□□ -1.62
BFR1	YOR198C	SBP1	P10080	294 aa	Known RBP	4.91	□□□□□ -1.62
BFR1	YOR198C	RGP1	P16664	663 aa		4.91	□□□□□ -1.62
BFR1	YOR198C	TTI1	P36097	1038 aa		4.91	□□□□□ -1.62
BFR1	YOR198C	SBE2	P42223	864 aa	Known RBP	4.91	□□□□□ -1.62
BFR1	YOR198C	Q0182	Q9ZZW1	134 aa		4.91	□□□□□ -1.62
BFR1	YOR198C	SCD5	P34758	872 aa		4.9	□□□□□ -1.62
BFR1	YOR198C	TGL4	P36165	910 aa		4.9	□□□□□ -1.62
BFR1	YOR198C	ROM1	P53046	1155 aa		4.9	□□□□□ -1.62
BFR1	YOR198C	UTP4	Q06679	776 aa	Known RBP	4.9	□□□□□ -1.62
BFR1	YOR198C	YPR053C	Q6Q5F3	151 aa		4.9	□□□□□ -1.62
BFR1	YOR198C	YNR014W	P53719	212 aa		4.89	□□□□□ -1.63
BFR1	YOR198C	TY1A-DR2	Q03964	440 aa	Known RBP	4.89	□□□□□ -1.63
BFR1	YOR198C	PDC5	P16467	563 aa	Known RBP	4.89	□□□□□ -1.63
BFR1	YOR198C	KNS1	P32350	737 aa	Predicted RBP	4.89	□□□□□ -1.63
BFR1	YOR198C	NGR1	P32831	672 aa	Known RBP	4.89	□□□□□ -1.63
BFR1	YOR198C	TDA6	Q06466	467 aa		4.89	□□□□□ -1.63
BFR1	YOR198C	VAN1	P23642	535 aa		4.88	□□□□□ -1.63
BFR1	YOR198C	MSC7	P38694	644 aa		4.88	□□□□□ -1.63
BFR1	YOR198C	HXT5	P38695	592 aa		4.88	□□□□□ -1.63
BFR1	YOR198C	SKN7	P38889	622 aa		4.88	□□□□□ -1.63
BFR1	YOR198C	MTO1	P53070	669 aa		4.88	□□□□□ -1.63
BFR1	YOR198C	ECM23	Q02710	187 aa		4.88	□□□□□ -1.63
BFR1	YOR198C	TRS33	Q99394	268 aa		4.87	□□□□□ -1.63
BFR1	YOR198C	CPS1	P27614	576 aa		4.86	□□□□□ -1.63
BFR1	YOR198C	MET1	P36150	593 aa		4.86	□□□□□ -1.63
BFR1	YOR198C	CWH41	P53008	833 aa		4.86	□□□□□ -1.63
BFR1	YOR198C	MCX1	P38323	520 aa	Predicted RBP	4.85	□□□□□ -1.63
BFR1	YOR198C	BOI2	P39969	1040 aa		4.85	□□□□□ -1.63
BFR1	YOR198C	HEH2	Q03281	663 aa		4.85	□□□□□ -1.63
BFR1	YOR198C	KAP122	P32767	1081 aa		4.84	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms