RNA–Protein interactions for RNA: YOR166C

SWT1, Transcript of RNA endoribonuclease involved in perinuclear mRNP quality control, yeast

Gene SWT1, Length 1,377 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWT1	YOR166C	SHM1	P37292	490 aa	Predicted RBP	5.23	□□□□□ -1.57
SWT1	YOR166C	SLX8	P40072	274 aa		5.23	□□□□□ -1.57
SWT1	YOR166C	UTP13	Q05946	817 aa	Known RBP	5.23	□□□□□ -1.57
SWT1	YOR166C	YPR053C	Q6Q5F3	151 aa		5.23	□□□□□ -1.57
SWT1	YOR166C	AHP1	P38013	176 aa	Known RBP	5.22	□□□□□ -1.57
SWT1	YOR166C	YBL036C	P38197	257 aa		5.22	□□□□□ -1.57
SWT1	YOR166C	UTP7	P40055	554 aa	Known RBP	5.22	□□□□□ -1.57
SWT1	YOR166C	JJJ2	P46997	583 aa		5.22	□□□□□ -1.57
SWT1	YOR166C	TDA6	Q06466	467 aa		5.22	□□□□□ -1.57
SWT1	YOR166C	GPM1	P00950	247 aa	Known RBP	5.2	□□□□□ -1.58
SWT1	YOR166C	TBS1	P38114	1094 aa		5.2	□□□□□ -1.58
SWT1	YOR166C	RPN1	P38764	993 aa	Known RBP	5.2	□□□□□ -1.58
SWT1	YOR166C	HDA3	Q06623	655 aa		5.2	□□□□□ -1.58
SWT1	YOR166C	IRE1	P32361	1115 aa		5.19	□□□□□ -1.58
SWT1	YOR166C	BIO2	P32451	375 aa		5.19	□□□□□ -1.58
SWT1	YOR166C	MCX1	P38323	520 aa	Predicted RBP	5.19	□□□□□ -1.58
SWT1	YOR166C	SOH1	P38633	127 aa		5.19	□□□□□ -1.58
SWT1	YOR166C	SUP45	P12385	437 aa	Known RBP	5.18	□□□□□ -1.58
SWT1	YOR166C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	5.18	□□□□□ -1.58	not detected
SWT1	YOR166C	YPQ2	Q06328	317 aa		5.18	□□□□□ -1.58
SWT1	YOR166C	PSH1	Q12161	406 aa		5.18	□□□□□ -1.58
SWT1	YOR166C	RPS31	P05759	152 aa	Known RBP	5.17	□□□□□ -1.58
SWT1	YOR166C	YCK2	P23292	546 aa	Known RBP	5.17	□□□□□ -1.58
SWT1	YOR166C	PKC1	P24583	1151 aa		5.17	□□□□□ -1.58
SWT1	YOR166C	YMR187C	Q03236	431 aa		5.17	□□□□□ -1.58
SWT1	YOR166C	TFB3	Q03290	321 aa		5.17	□□□□□ -1.58
SWT1	YOR166C	PDC6	P26263	563 aa	Known RBP	5.16	□□□□□ -1.58
SWT1	YOR166C	ATG3	P40344	310 aa		5.16	□□□□□ -1.58
SWT1	YOR166C	ALA1	P40825	983 aa	Known RBP	5.16	□□□□□ -1.58
SWT1	YOR166C	YPP1	P46951	817 aa		5.16	□□□□□ -1.58
SWT1	YOR166C	RDS2	P19541	446 aa	Known RBP	5.15	□□□□□ -1.59
SWT1	YOR166C	FPS1	P23900	669 aa		5.15	□□□□□ -1.59
SWT1	YOR166C	MRPL16	P38064	232 aa		5.15	□□□□□ -1.59
SWT1	YOR166C	BRL1	P38770	471 aa		5.15	□□□□□ -1.59
SWT1	YOR166C	ENO2	P00925	437 aa	Known RBP	5.14	□□□□□ -1.59
SWT1	YOR166C	SPR3	P41901	512 aa		5.14	□□□□□ -1.59
SWT1	YOR166C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	5.14	□□□□□ -1.59	not detected
SWT1	YOR166C	YDR215C	Q12240	137 aa		5.14	□□□□□ -1.59
SWT1	YOR166C	LEU1	P07264	779 aa	Known RBP	5.13	□□□□□ -1.59
SWT1	YOR166C	PDC5	P16467	563 aa	Known RBP	5.13	□□□□□ -1.59
SWT1	YOR166C	RIM21	P48565	533 aa		5.13	□□□□□ -1.59
SWT1	YOR166C	YNR014W	P53719	212 aa		5.13	□□□□□ -1.59
SWT1	YOR166C	TY1A-DR2	Q03964	440 aa	Known RBP	5.13	□□□□□ -1.59
SWT1	YOR166C	SWI5	P08153	709 aa		5.12	□□□□□ -1.59
SWT1	YOR166C	KNS1	P32350	737 aa	Predicted RBP	5.12	□□□□□ -1.59
SWT1	YOR166C	ALD2	P47771	506 aa		5.12	□□□□□ -1.59
SWT1	YOR166C	MSC7	P38694	644 aa		5.11	□□□□□ -1.59
SWT1	YOR166C	SLN1	P39928	1220 aa	Predicted RBP	5.11	□□□□□ -1.59
SWT1	YOR166C	BOI2	P39969	1040 aa		5.11	□□□□□ -1.59
SWT1	YOR166C	YNL108C	P53929	270 aa		5.11	□□□□□ -1.59
SWT1	YOR166C	STB3	Q12427	513 aa		5.11	□□□□□ -1.59
SWT1	YOR166C	AMN1	P38285	549 aa	Predicted RBP	5.09	□□□□□ -1.59
SWT1	YOR166C	YNL165W	P53891	406 aa		5.09	□□□□□ -1.59
SWT1	YOR166C	MCM1	P11746	286 aa		5.08	□□□□□ -1.6
SWT1	YOR166C	AIM9	P40053	627 aa	Known RBP	5.08	□□□□□ -1.6
SWT1	YOR166C	SBP1	P10080	294 aa	Known RBP	5.07	□□□□□ -1.6
SWT1	YOR166C	MRX10	Q05648	414 aa		5.07	□□□□□ -1.6
SWT1	YOR166C	MCA1	Q08601	432 aa		5.07	□□□□□ -1.6
SWT1	YOR166C	RPS6A	P0CX37	236 aa	Known RBP	5.06	□□□□□ -1.6
SWT1	YOR166C	RPS6B	P0CX38	236 aa	Predicted RBP	5.06	□□□□□ -1.6
SWT1	YOR166C	MET1	P36150	593 aa		5.06	□□□□□ -1.6
SWT1	YOR166C	RGP1	P16664	663 aa		5.05	□□□□□ -1.6
SWT1	YOR166C	LSB6	P42951	607 aa		5.04	□□□□□ -1.6
SWT1	YOR166C	NTH2	P35172	780 aa		5.03	□□□□□ -1.6
SWT1	YOR166C	YFL034W	P43564	1073 aa		5.03	□□□□□ -1.6
SWT1	YOR166C	MLF3	P32047	452 aa		5.02	□□□□□ -1.61
SWT1	YOR166C	PEP12	P32854	288 aa		5.02	□□□□□ -1.61
SWT1	YOR166C	PRY1	P47032	299 aa		5.02	□□□□□ -1.61
SWT1	YOR166C	ENO1	P00924	437 aa	Known RBP	5.01	□□□□□ -1.61
SWT1	YOR166C	TAT1	P38085	619 aa		5.01	□□□□□ -1.61
SWT1	YOR166C	TSC13	Q99190	310 aa		5.01	□□□□□ -1.61
SWT1	YOR166C	RPP1A	P05318	106 aa	Predicted RBP	5	□□□□□ -1.61
SWT1	YOR166C	YJL007C	P47080	104 aa		5	□□□□□ -1.61
SWT1	YOR166C	Q0182	Q9ZZW1	134 aa		5	□□□□□ -1.61
SWT1	YOR166C	GLT1	Q12680	2145 aa	Known RBP	4.99	□□□□□ -1.61
SWT1	YOR166C	PDI1	P17967	522 aa	Known RBP	4.99	□□□□□ -1.61
SWT1	YOR166C	YTA6	P40328	754 aa		4.99	□□□□□ -1.61
SWT1	YOR166C	PRK1	P40494	810 aa		4.99	□□□□□ -1.61
SWT1	YOR166C	SKP1	P52286	194 aa		4.99	□□□□□ -1.61
SWT1	YOR166C	YPL034W	Q03083	165 aa		4.99	□□□□□ -1.61
SWT1	YOR166C	TPS3	P38426	1054 aa	Known RBP	4.98	□□□□□ -1.61
SWT1	YOR166C	HEH2	Q03281	663 aa		4.98	□□□□□ -1.61
SWT1	YOR166C	BIM1	P40013	344 aa		4.97	□□□□□ -1.61
SWT1	YOR166C	BUD9	P53226	547 aa		4.97	□□□□□ -1.61
SWT1	YOR166C	UTP4	Q06679	776 aa	Known RBP	4.97	□□□□□ -1.61
SWT1	YOR166C	CYT1	P07143	309 aa		4.96	□□□□□ -1.62
SWT1	YOR166C	TIF1	P10081	395 aa	Known RBP	4.96	□□□□□ -1.62
SWT1	YOR166C	PGM2	P37012	569 aa	Known RBP	4.96	□□□□□ -1.62
SWT1	YOR166C	ATG32	P40458	529 aa		4.96	□□□□□ -1.62
SWT1	YOR166C	NHA1	Q99271	985 aa		4.96	□□□□□ -1.62
SWT1	YOR166C	NAR1	P23503	491 aa	Known RBP	4.95	□□□□□ -1.62
SWT1	YOR166C	UBP1	P25037	809 aa		4.95	□□□□□ -1.62
SWT1	YOR166C	ALG14	P38242	237 aa		4.94	□□□□□ -1.62
SWT1	YOR166C	HXT5	P38695	592 aa		4.94	□□□□□ -1.62
SWT1	YOR166C	PGM1	P33401	570 aa	Known RBP	4.93	□□□□□ -1.62
SWT1	YOR166C	ACS2	P52910	683 aa	Known RBP	4.93	□□□□□ -1.62
SWT1	YOR166C	MTO1	P53070	669 aa		4.93	□□□□□ -1.62
SWT1	YOR166C	GIS4	Q04233	774 aa		4.93	□□□□□ -1.62
SWT1	YOR166C	RTG2	P32608	588 aa	Known RBP	4.92	□□□□□ -1.62
SWT1	YOR166C	INP52	P50942	1183 aa		4.92	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 45.3 ms