RNA–Protein interactions for RNA: YOL139C

CDC33, Transcript of mRNA cap binding protein and translation initiation factor eIF4E, yeast

Gene CDC33, Length 642 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC33	YOL139C	YPR053C	Q6Q5F3	151 aa		5.11	□□□□□ -1.59
CDC33	YOL139C	SBP1	P10080	294 aa	Known RBP	5.1	□□□□□ -1.59
CDC33	YOL139C	HAL5	P38970	855 aa	Known RBP	5.09	□□□□□ -1.59
CDC33	YOL139C	CEM1	P39525	442 aa		5.09	□□□□□ -1.59
CDC33	YOL139C	UBP15	P50101	1230 aa		5.09	□□□□□ -1.59
CDC33	YOL139C	YNL108C	P53929	270 aa		5.09	□□□□□ -1.59
CDC33	YOL139C	SIS2	P36024	562 aa		5.08	□□□□□ -1.6
CDC33	YOL139C	SOH1	P38633	127 aa		5.08	□□□□□ -1.6
CDC33	YOL139C	SKN7	P38889	622 aa		5.08	□□□□□ -1.6
CDC33	YOL139C	YFL034W	P43564	1073 aa		5.08	□□□□□ -1.6
CDC33	YOL139C	SSN3	P39073	555 aa		5.07	□□□□□ -1.6
CDC33	YOL139C	SLX8	P40072	274 aa		5.07	□□□□□ -1.6
CDC33	YOL139C	SUM1	P46676	1062 aa		5.07	□□□□□ -1.6
CDC33	YOL139C	YJL007C	P47080	104 aa		5.07	□□□□□ -1.6
CDC33	YOL139C	ADE12	P80210	433 aa	Known RBP	5.07	□□□□□ -1.6
CDC33	YOL139C	MRX10	Q05648	414 aa		5.07	□□□□□ -1.6
CDC33	YOL139C	DAT1	P13483	248 aa	Known RBP	5.06	□□□□□ -1.6
CDC33	YOL139C	SLA1	P32790	1244 aa		5.06	□□□□□ -1.6
CDC33	YOL139C	AHP1	P38013	176 aa	Known RBP	5.06	□□□□□ -1.6
CDC33	YOL139C	RPL34B	P40525	121 aa	Known RBP	5.06	□□□□□ -1.6
CDC33	YOL139C	HDA3	Q06623	655 aa		5.06	□□□□□ -1.6
CDC33	YOL139C	RDS2	P19541	446 aa	Known RBP	5.05	□□□□□ -1.6
CDC33	YOL139C	BIM1	P40013	344 aa		5.05	□□□□□ -1.6
CDC33	YOL139C	TIF1	P10081	395 aa	Known RBP	5.04	□□□□□ -1.6
CDC33	YOL139C	MCM1	P11746	286 aa		5.04	□□□□□ -1.6
CDC33	YOL139C	ATG32	P40458	529 aa		5.04	□□□□□ -1.6
CDC33	YOL139C	SYT1	Q06836	1226 aa		5.04	□□□□□ -1.6
CDC33	YOL139C	PEP12	P32854	288 aa		5.03	□□□□□ -1.6
CDC33	YOL139C	AIM9	P40053	627 aa	Known RBP	5.03	□□□□□ -1.6
CDC33	YOL139C	JJJ2	P46997	583 aa		5.03	□□□□□ -1.6
CDC33	YOL139C	YMR187C	Q03236	431 aa		5.03	□□□□□ -1.6
CDC33	YOL139C	TY1A-DR3	Q12441	440 aa		5.03	□□□□□ -1.6
CDC33	YOL139C	YDR461C-A	Q2V2P7	80 aa		5.03	□□□□□ -1.6
CDC33	YOL139C	ENO1	P00924	437 aa	Known RBP	5.02	□□□□□ -1.61
CDC33	YOL139C	DIT1	P21623	536 aa		5.02	□□□□□ -1.61
CDC33	YOL139C	YMR265C	Q03508	461 aa	Known RBP	5.02	□□□□□ -1.61
CDC33	YOL139C	YPQ2	Q06328	317 aa		5.02	□□□□□ -1.61
CDC33	YOL139C	TDA6	Q06466	467 aa		5.02	□□□□□ -1.61
CDC33	YOL139C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	5.02	□□□□□ -1.61	not detected
CDC33	YOL139C	RTG2	P32608	588 aa	Known RBP	5.01	□□□□□ -1.61
CDC33	YOL139C	TSC13	Q99190	310 aa		5.01	□□□□□ -1.61
CDC33	YOL139C	RPP1A	P05318	106 aa	Predicted RBP	5	□□□□□ -1.61
CDC33	YOL139C	SWI5	P08153	709 aa		5	□□□□□ -1.61
CDC33	YOL139C	SBE2	P42223	864 aa	Known RBP	5	□□□□□ -1.61
CDC33	YOL139C	RPS6A	P0CX37	236 aa	Known RBP	4.99	□□□□□ -1.61
CDC33	YOL139C	RPS6B	P0CX38	236 aa	Predicted RBP	4.99	□□□□□ -1.61
CDC33	YOL139C	IRE1	P32361	1115 aa		4.99	□□□□□ -1.61
CDC33	YOL139C	UTP7	P40055	554 aa	Known RBP	4.99	□□□□□ -1.61
CDC33	YOL139C	ALA1	P40825	983 aa	Known RBP	4.99	□□□□□ -1.61
CDC33	YOL139C	UBP1	P25037	809 aa		4.98	□□□□□ -1.61
CDC33	YOL139C	MCX1	P38323	520 aa	Predicted RBP	4.98	□□□□□ -1.61
CDC33	YOL139C	KRE33	P53914	1056 aa	Known RBP	4.98	□□□□□ -1.61
CDC33	YOL139C	PHO87	P25360	923 aa		4.97	□□□□□ -1.61
CDC33	YOL139C	GAS4	Q08271	471 aa		4.97	□□□□□ -1.61
CDC33	YOL139C	HAP4	P14064	554 aa		4.96	□□□□□ -1.62
CDC33	YOL139C	SHM1	P37292	490 aa	Predicted RBP	4.96	□□□□□ -1.62
CDC33	YOL139C	UTP4	Q06679	776 aa	Known RBP	4.96	□□□□□ -1.62
CDC33	YOL139C	LEU1	P07264	779 aa	Known RBP	4.95	□□□□□ -1.62
CDC33	YOL139C	PDC6	P26263	563 aa	Known RBP	4.95	□□□□□ -1.62
CDC33	YOL139C	NTH2	P35172	780 aa		4.95	□□□□□ -1.62
CDC33	YOL139C	YNR014W	P53719	212 aa		4.95	□□□□□ -1.62
CDC33	YOL139C	PSH1	Q12161	406 aa		4.95	□□□□□ -1.62
CDC33	YOL139C	CYT1	P07143	309 aa		4.93	□□□□□ -1.62
CDC33	YOL139C	YTA6	P40328	754 aa		4.93	□□□□□ -1.62
CDC33	YOL139C	RPS31	P05759	152 aa	Known RBP	4.92	□□□□□ -1.62
CDC33	YOL139C	GAL2	P13181	574 aa		4.92	□□□□□ -1.62
CDC33	YOL139C	PDI1	P17967	522 aa	Known RBP	4.92	□□□□□ -1.62
CDC33	YOL139C	YCK2	P23292	546 aa	Known RBP	4.92	□□□□□ -1.62
CDC33	YOL139C	FPS1	P23900	669 aa		4.92	□□□□□ -1.62
CDC33	YOL139C	SCD5	P34758	872 aa		4.92	□□□□□ -1.62
CDC33	YOL139C	ACS2	P52910	683 aa	Known RBP	4.92	□□□□□ -1.62
CDC33	YOL139C	DMA2	P53924	522 aa		4.91	□□□□□ -1.62
CDC33	YOL139C	GPM1	P00950	247 aa	Known RBP	4.9	□□□□□ -1.63
CDC33	YOL139C	RGP1	P16664	663 aa		4.9	□□□□□ -1.63
CDC33	YOL139C	NGR1	P32831	672 aa	Known RBP	4.9	□□□□□ -1.63
CDC33	YOL139C	TTI1	P36097	1038 aa		4.9	□□□□□ -1.63
CDC33	YOL139C	MRPL16	P38064	232 aa		4.9	□□□□□ -1.63
CDC33	YOL139C	AMN1	P38285	549 aa	Predicted RBP	4.9	□□□□□ -1.63
CDC33	YOL139C	BOI2	P39969	1040 aa		4.9	□□□□□ -1.63
CDC33	YOL139C	SPR3	P41901	512 aa		4.9	□□□□□ -1.63
CDC33	YOL139C	YDR215C	Q12240	137 aa		4.9	□□□□□ -1.63
CDC33	YOL139C	KNS1	P32350	737 aa	Predicted RBP	4.89	□□□□□ -1.63
CDC33	YOL139C	ALD2	P47771	506 aa		4.89	□□□□□ -1.63
CDC33	YOL139C	STB3	Q12427	513 aa		4.89	□□□□□ -1.63
CDC33	YOL139C	VAN1	P23642	535 aa		4.88	□□□□□ -1.63
CDC33	YOL139C	MLF3	P32047	452 aa		4.88	□□□□□ -1.63
CDC33	YOL139C	MET1	P36150	593 aa		4.88	□□□□□ -1.63
CDC33	YOL139C	LSB6	P42951	607 aa		4.88	□□□□□ -1.63
CDC33	YOL139C	TGL4	P36165	910 aa		4.87	□□□□□ -1.63
CDC33	YOL139C	HXT5	P38695	592 aa		4.87	□□□□□ -1.63
CDC33	YOL139C	SKP1	P52286	194 aa		4.87	□□□□□ -1.63
CDC33	YOL139C	ROM1	P53046	1155 aa		4.87	□□□□□ -1.63
CDC33	YOL139C	YNL165W	P53891	406 aa		4.87	□□□□□ -1.63
CDC33	YOL139C	HEH2	Q03281	663 aa		4.87	□□□□□ -1.63
CDC33	YOL139C	TRS33	Q99394	268 aa		4.87	□□□□□ -1.63
CDC33	YOL139C	SLN1	P39928	1220 aa	Predicted RBP	4.86	□□□□□ -1.63
CDC33	YOL139C	Q0182	Q9ZZW1	134 aa		4.86	□□□□□ -1.63
CDC33	YOL139C	PDC5	P16467	563 aa	Known RBP	4.85	□□□□□ -1.63
CDC33	YOL139C	CWH41	P53008	833 aa		4.85	□□□□□ -1.63
CDC33	YOL139C	TY1A-DR2	Q03964	440 aa	Known RBP	4.85	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms