RNA–Protein interactions for RNA: YNL086W

SNN1, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene SNN1, Length 309 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNN1YNL086W MSN5P52918 1224 aa8.28□□□□□ -1.08
SNN1YNL086W PKH3Q03306 898 aaPredicted RBP8.27□□□□□ -1.09
SNN1YNL086W TFB4Q12004 338 aa8.27□□□□□ -1.09
SNN1YNL086W SNF2P22082 1703 aa8.26□□□□□ -1.09
SNN1YNL086W YRF1-3P0CX14 1859 aa8.26□□□□□ -1.09
SNN1YNL086W YRF1-7P0CX15 1859 aa8.26□□□□□ -1.09
SNN1YNL086W YRF1-6P53819 1859 aa8.26□□□□□ -1.09
SNN1YNL086W RAD59Q12223 238 aa8.26□□□□□ -1.09
SNN1YNL086W BIO2P32451 375 aa8.25□□□□□ -1.09
SNN1YNL086W YER156CP40093 338 aaKnown RBP8.25□□□□□ -1.09
SNN1YNL086W PEX21P50091 288 aa8.25□□□□□ -1.09
SNN1YNL086W BUG1Q12191 341 aa8.25□□□□□ -1.09
SNN1YNL086W ERG12P07277 443 aa8.24□□□□□ -1.09
SNN1YNL086W ESS1P22696 170 aa8.24□□□□□ -1.09
SNN1YNL086W RTG2P32608 588 aaKnown RBP8.24□□□□□ -1.09
SNN1YNL086W EAP1P36041 632 aaKnown RBP8.24□□□□□ -1.09
SNN1YNL086W YPR204WQ08995 1032 aa8.24□□□□□ -1.09
SNN1YNL086W LEU2P04173 364 aaPredicted RBP8.23□□□□□ -1.09
SNN1YNL086W CHZ1P40019 153 aaPredicted RBP8.23□□□□□ -1.09
SNN1YNL086W MTR4P47047 1073 aaKnown RBP8.23□□□□□ -1.09
SNN1YNL086W SCJ1P25303 377 aa8.22□□□□□ -1.09
SNN1YNL086W PTC4P38089 393 aa8.22□□□□□ -1.09
SNN1YNL086W PRP43P53131 767 aaKnown RBP8.22□□□□□ -1.09
SNN1YNL086W MEC3Q02574 474 aa8.22□□□□□ -1.09
SNN1YNL086W PUS5Q06244 254 aa8.22□□□□□ -1.09
SNN1YNL086W NOP8Q08287 484 aaPredicted RBP8.22□□□□□ -1.09
SNN1YNL086W CTT1P06115 562 aa8.21□□□□□ -1.1
SNN1YNL086W SIT4P20604 311 aa8.21□□□□□ -1.1
SNN1YNL086W SPE2P21182 396 aa8.21□□□□□ -1.1
SNN1YNL086W YNL108CP53929 270 aa8.21□□□□□ -1.1
SNN1YNL086W ADE16P54113 591 aaKnown RBP8.21□□□□□ -1.1
SNN1YNL086W CDC73Q06697 393 aa8.21□□□□□ -1.1
SNN1YNL086W APC1P53886 1748 aa8.2□□□□□ -1.1
SNN1YNL086W ARG8P18544 423 aa8.2□□□□□ -1.1
SNN1YNL086W TTI1P36097 1038 aa8.2□□□□□ -1.1
SNN1YNL086W TOS1P38288 455 aa8.2□□□□□ -1.1
SNN1YNL086W WSC3Q12215 556 aa8.2□□□□□ -1.1
SNN1YNL086W YLR419WQ06698 1435 aaKnown RBP8.2□□□□□ -1.1
SNN1YNL086W YJU3P28321 313 aa8.19□□□□□ -1.1
SNN1YNL086W SPT5P27692 1063 aaKnown RBP8.18□□□□□ -1.1
SNN1YNL086W RPL34AP87262 121 aaPredicted RBP8.18□□□□□ -1.1
SNN1YNL086W JIP4Q03361 876 aa8.18□□□□□ -1.1
SNN1YNL086W TUM1Q08686 304 aaKnown RBP8.18□□□□□ -1.1
SNN1YNL086W MHP1P43638 1398 aa8.18□□□□□ -1.1
SNN1YNL086W CWH41P53008 833 aa8.17□□□□□ -1.1
SNN1YNL086W KIP3P53086 805 aaKnown RBP8.17□□□□□ -1.1
SNN1YNL086W KIN4Q01919 800 aa8.17□□□□□ -1.1
SNN1YNL086W ATG13Q06628 738 aa8.17□□□□□ -1.1
SNN1YNL086W TRP5P00931 707 aaKnown RBP8.16□□□□□ -1.1
SNN1YNL086W SUP45P12385 437 aaKnown RBP8.16□□□□□ -1.1
SNN1YNL086W SIS2P36024 562 aa8.16□□□□□ -1.1
SNN1YNL086W UTP22P53254 1237 aaPredicted RBP8.16□□□□□ -1.1
SNN1YNL086W RIX7Q07844 837 aaKnown RBP8.16□□□□□ -1.1
SNN1YNL086W RPO41P13433 1351 aaKnown RBP8.15□□□□□ -1.1
SNN1YNL086W RRT14P40470 206 aa8.15□□□□□ -1.1
SNN1YNL086W DPS1P04802 557 aaKnown RBP8.14□□□□□ -1.11
SNN1YNL086W RAD4P14736 754 aa8.14□□□□□ -1.11
SNN1YNL086W SLY41P22215 453 aa8.14□□□□□ -1.11
SNN1YNL086W YKL222CP35995 705 aa8.14□□□□□ -1.11
SNN1YNL086W YIL177CP40434 1758 aa8.14□□□□□ -1.11
SNN1YNL086W YJL225CP40889 1758 aa8.14□□□□□ -1.11
SNN1YNL086W SIR4P11978 1358 aa8.13□□□□□ -1.11
SNN1YNL086W DPL1Q05567 589 aa8.13□□□□□ -1.11
SNN1YNL086W GAS4Q08271 471 aa8.13□□□□□ -1.11
SNN1YNL086W MAK16P10962 306 aaPredicted RBP8.12□□□□□ -1.11
SNN1YNL086W RTF1P53064 558 aa8.12□□□□□ -1.11
SNN1YNL086W TOP1P04786 769 aa8.11□□□□□ -1.11
SNN1YNL086W RSC30P38781 883 aa8.11□□□□□ -1.11
SNN1YNL086W DUS1P53759 423 aaKnown RBP8.11□□□□□ -1.11
SNN1YNL086W YNL115CP53925 644 aa8.11□□□□□ -1.11
SNN1YNL086W NOB1Q08444 459 aaKnown RBP8.11□□□□□ -1.11
SNN1YNL086W YRR1Q12172 810 aa8.11□□□□□ -1.11
SNN1YNL086W ENO2P00925 437 aaKnown RBP8.1□□□□□ -1.11
SNN1YNL086W YDJ1P25491 409 aaKnown RBP8.1□□□□□ -1.11
SNN1YNL086W SLD2P34252 453 aa8.1□□□□□ -1.11
SNN1YNL086W ERT1P38140 529 aa8.1□□□□□ -1.11
SNN1YNL086W ENO1P00924 437 aaKnown RBP8.09□□□□□ -1.11
SNN1YNL086W GRX1P25373 110 aaKnown RBP8.09□□□□□ -1.11
SNN1YNL086W CDC3P32457 520 aaKnown RBP8.09□□□□□ -1.11
SNN1YNL086W THS1P04801 734 aaKnown RBP8.08□□□□□ -1.12
SNN1YNL086W YPP1P46951 817 aa8.08□□□□□ -1.12
SNN1YNL086W MPC54Q08550 464 aa8.08□□□□□ -1.12
SNN1YNL086W CTI6Q08923 506 aa8.08□□□□□ -1.12
SNN1YNL086W BUB1P41695 1021 aaKnown RBP RIP-Chip data8.07□□□□□ -1.12not detected
SNN1YNL086W ULI1P43604 169 aa8.07□□□□□ -1.12
SNN1YNL086W RIM21P48565 533 aa8.07□□□□□ -1.12
SNN1YNL086W MRX10Q05648 414 aa8.07□□□□□ -1.12
SNN1YNL086W ISU2Q12056 156 aa8.07□□□□□ -1.12
SNN1YNL086W MID1P41821 548 aa8.06□□□□□ -1.12
SNN1YNL086W ORC1P54784 914 aaPredicted RBP8.06□□□□□ -1.12
SNN1YNL086W PML39Q03760 334 aa8.06□□□□□ -1.12
SNN1YNL086W YLR278CQ05854 1341 aa8.05□□□□□ -1.12
SNN1YNL086W RIM15P43565 1770 aa8.05□□□□□ -1.12
SNN1YNL086W TRM1P15565 570 aaKnown RBP8.05□□□□□ -1.12
SNN1YNL086W PUP1P25043 261 aa8.05□□□□□ -1.12
SNN1YNL086W TIF11P38912 153 aaKnown RBP8.05□□□□□ -1.12
SNN1YNL086W NAF1P53919 492 aaKnown RBP8.05□□□□□ -1.12
SNN1YNL086W NYV1Q12255 253 aa8.05□□□□□ -1.12
SNN1YNL086W YML133CQ03099 1374 aa8.05□□□□□ -1.12
SNN1YNL086W YLL067CQ07888 1374 aa8.05□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 29.1 ms