RNA–Protein interactions for RNA: YNL024C-A

KSH1, Transcript of Essential protein suggested to function early in the secretory pathway, yeastyeast

Gene KSH1, Length 219 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
KSH1YNL024C-A RAM2P29703 316 aa7.99□□□□□ -1.13
KSH1YNL024C-A EAP1P36041 632 aaKnown RBP7.99□□□□□ -1.13
KSH1YNL024C-A RRT14P40470 206 aa7.99□□□□□ -1.13
KSH1YNL024C-A LDB19Q12502 818 aa7.99□□□□□ -1.13
KSH1YNL024C-A UTP10P42945 1769 aaKnown RBP7.98□□□□□ -1.13
KSH1YNL024C-A DAL5P15365 543 aa7.97□□□□□ -1.13
KSH1YNL024C-A FUN12P39730 1002 aaKnown RBP7.97□□□□□ -1.13
KSH1YNL024C-A SRT1Q03175 343 aa7.97□□□□□ -1.13
KSH1YNL024C-A ECM16Q04217 1267 aaKnown RBP7.97□□□□□ -1.13
KSH1YNL024C-A BMS1Q08965 1183 aaKnown RBP7.97□□□□□ -1.13
KSH1YNL024C-A YPP1P46951 817 aa7.96□□□□□ -1.14
KSH1YNL024C-A POL32P47110 350 aa7.96□□□□□ -1.14
KSH1YNL024C-A FRK1Q03002 865 aaPredicted RBP7.96□□□□□ -1.14
KSH1YNL024C-A INP54Q08227 384 aaKnown RBP7.96□□□□□ -1.14
KSH1YNL024C-A NUP145P49687 1317 aa7.96□□□□□ -1.14
KSH1YNL024C-A TRP5P00931 707 aaKnown RBP7.94□□□□□ -1.14
KSH1YNL024C-A RPS19AP07280 144 aaKnown RBP7.94□□□□□ -1.14
KSH1YNL024C-A RPS19BP07281 144 aaPredicted RBP7.94□□□□□ -1.14
KSH1YNL024C-A RPC31P17890 251 aa7.94□□□□□ -1.14
KSH1YNL024C-A MAK11P20484 414 aaKnown RBP7.94□□□□□ -1.14
KSH1YNL024C-A HGH1P48362 394 aaKnown RBP7.94□□□□□ -1.14
KSH1YNL024C-A YOL057WQ08225 711 aa7.94□□□□□ -1.14
KSH1YNL024C-A COQ4O13525 335 aa7.93□□□□□ -1.14
KSH1YNL024C-A OSM1P21375 501 aaKnown RBP7.91□□□□□ -1.14
KSH1YNL024C-A YIR014WP40570 242 aa7.91□□□□□ -1.14
KSH1YNL024C-A ADE16P54113 591 aaKnown RBP7.91□□□□□ -1.14
KSH1YNL024C-A DNM1P54861 757 aa7.91□□□□□ -1.14
KSH1YNL024C-A PUF6Q04373 656 aaKnown RBP7.91□□□□□ -1.14
KSH1YNL024C-A MDG1P53885 366 aa7.9□□□□□ -1.14
KSH1YNL024C-A ATG13Q06628 738 aa7.9□□□□□ -1.14
KSH1YNL024C-A NOP8Q08287 484 aaPredicted RBP7.9□□□□□ -1.14
KSH1YNL024C-A GYP5Q12344 894 aa7.9□□□□□ -1.14
KSH1YNL024C-A FAS2P19097 1887 aaKnown RBP7.89□□□□□ -1.15
KSH1YNL024C-A YJR008WP47085 338 aa7.89□□□□□ -1.15
KSH1YNL024C-A ALD3P54114 506 aa7.89□□□□□ -1.15
KSH1YNL024C-A RAD4P14736 754 aa7.88□□□□□ -1.15
KSH1YNL024C-A RTG1P32607 177 aa7.88□□□□□ -1.15
KSH1YNL024C-A YNG2P38806 282 aaKnown RBP7.88□□□□□ -1.15
KSH1YNL024C-A YBP2P53169 641 aa7.88□□□□□ -1.15
KSH1YNL024C-A RMT2Q03305 412 aa7.88□□□□□ -1.15
KSH1YNL024C-A CSI1Q04368 295 aa7.88□□□□□ -1.15
KSH1YNL024C-A YDR306CQ06640 478 aa7.88□□□□□ -1.15
KSH1YNL024C-A MRP7P12687 371 aa7.87□□□□□ -1.15
KSH1YNL024C-A CST6P40535 587 aa7.87□□□□□ -1.15
KSH1YNL024C-A SSP2Q08646 371 aa7.87□□□□□ -1.15
KSH1YNL024C-A GRX1P25373 110 aaKnown RBP7.86□□□□□ -1.15
KSH1YNL024C-A GCD7P32502 381 aaPredicted RBP7.86□□□□□ -1.15
KSH1YNL024C-A EDS1P38073 919 aa7.86□□□□□ -1.15
KSH1YNL024C-A YBR287WP38355 427 aa7.86□□□□□ -1.15
KSH1YNL024C-A BUG1Q12191 341 aa7.86□□□□□ -1.15
KSH1YNL024C-A YNL035CP53962 389 aaKnown RBP7.85□□□□□ -1.15
KSH1YNL024C-A BOI2P39969 1040 aa7.84□□□□□ -1.15
KSH1YNL024C-A ALE1Q08548 619 aa7.84□□□□□ -1.15
KSH1YNL024C-A NOP53Q12080 455 aaKnown RBP7.84□□□□□ -1.15
KSH1YNL024C-A PMD1P32634 1753 aa7.84□□□□□ -1.15
KSH1YNL024C-A RAD50P12753 1312 aa7.83□□□□□ -1.16
KSH1YNL024C-A YJL171CP46992 396 aa7.83□□□□□ -1.16
KSH1YNL024C-A EAF6P47128 113 aa7.83□□□□□ -1.16
KSH1YNL024C-A SPO1P53541 631 aa7.83□□□□□ -1.16
KSH1YNL024C-A PHM7Q12252 991 aa7.83□□□□□ -1.16
KSH1YNL024C-A HTA1P04911 132 aaKnown RBP7.82□□□□□ -1.16
KSH1YNL024C-A HTA2P04912 132 aa7.82□□□□□ -1.16
KSH1YNL024C-A SEC61P32915 480 aa7.82□□□□□ -1.16
KSH1YNL024C-A DCW1P36091 449 aa7.82□□□□□ -1.16
KSH1YNL024C-A SSF1P38789 453 aaPredicted RBP7.82□□□□□ -1.16
KSH1YNL024C-A SET1P38827 1080 aaKnown RBP7.82□□□□□ -1.16
KSH1YNL024C-A DAN4P47179 1161 aa7.82□□□□□ -1.16
KSH1YNL024C-A UTP22P53254 1237 aaPredicted RBP7.82□□□□□ -1.16
KSH1YNL024C-A CDC16P09798 840 aa7.81□□□□□ -1.16
KSH1YNL024C-A COQ8P27697 501 aa7.81□□□□□ -1.16
KSH1YNL024C-A RAD24P32641 659 aa7.81□□□□□ -1.16
KSH1YNL024C-A PTC3P34221 468 aaKnown RBP7.81□□□□□ -1.16
KSH1YNL024C-A TOS1P38288 455 aa7.81□□□□□ -1.16
KSH1YNL024C-A NMD2P38798 1089 aaKnown RBP7.81□□□□□ -1.16
KSH1YNL024C-A GRE2Q12068 342 aaKnown RBP7.81□□□□□ -1.16
KSH1YNL024C-A SUP35P05453 685 aaKnown RBP7.8□□□□□ -1.16
KSH1YNL024C-A NUP133P36161 1157 aa7.8□□□□□ -1.16
KSH1YNL024C-A HPC2Q01448 625 aa7.8□□□□□ -1.16
KSH1YNL024C-A NCR1Q12200 1170 aa7.8□□□□□ -1.16
KSH1YNL024C-A BMT6Q12291 365 aa7.8□□□□□ -1.16
KSH1YNL024C-A SWI1P09547 1314 aa7.79□□□□□ -1.16
KSH1YNL024C-A MSN5P52918 1224 aa7.79□□□□□ -1.16
KSH1YNL024C-A JIP4Q03361 876 aa7.79□□□□□ -1.16
KSH1YNL024C-A RFC1P38630 861 aaKnown RBP7.78□□□□□ -1.16
KSH1YNL024C-A UBP12P39538 1254 aa7.78□□□□□ -1.16
KSH1YNL024C-A MTC5Q03897 1148 aa7.78□□□□□ -1.16
KSH1YNL024C-A NKP2Q06162 153 aa7.78□□□□□ -1.16
KSH1YNL024C-A NCB2Q92317 146 aa7.78□□□□□ -1.16
KSH1YNL024C-A OPY1P38271 328 aa7.77□□□□□ -1.17
KSH1YNL024C-A ILV3P39522 585 aaKnown RBP7.77□□□□□ -1.17
KSH1YNL024C-A YEL023CP39992 682 aa7.76□□□□□ -1.17
KSH1YNL024C-A YER156CP40093 338 aaKnown RBP7.76□□□□□ -1.17
KSH1YNL024C-A ZDS2P54786 942 aa7.76□□□□□ -1.17
KSH1YNL024C-A TUM1Q08686 304 aaKnown RBP7.76□□□□□ -1.17
KSH1YNL024C-A YPR204WQ08995 1032 aa7.76□□□□□ -1.17
KSH1YNL024C-A HKR1P41809 1802 aa7.75□□□□□ -1.17
KSH1YNL024C-A CTT1P06115 562 aa7.75□□□□□ -1.17
KSH1YNL024C-A LPD1P09624 499 aaKnown RBP7.75□□□□□ -1.17
KSH1YNL024C-A IME2P32581 645 aa7.75□□□□□ -1.17
KSH1YNL024C-A RRD1P40454 393 aaKnown RBP7.75□□□□□ -1.17
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms