RNA–Protein interactions for RNA: YMR260C

TIF11, Transcript of Translation initiation factor eIF1A, yeast

Gene TIF11, Length 462 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIF11	YMR260C	AHP1	P38013	176 aa	Known RBP	5.52	□□□□□ -1.53
TIF11	YMR260C	YJL007C	P47080	104 aa		5.52	□□□□□ -1.53
TIF11	YMR260C	CUZ1	P53899	274 aa		5.52	□□□□□ -1.53
TIF11	YMR260C	MRX10	Q05648	414 aa		5.52	□□□□□ -1.53
TIF11	YMR260C	BIM1	P40013	344 aa		5.5	□□□□□ -1.53
TIF11	YMR260C	JJJ2	P46997	583 aa		5.5	□□□□□ -1.53
TIF11	YMR260C	YPQ2	Q06328	317 aa		5.5	□□□□□ -1.53
TIF11	YMR260C	DIT1	P21623	536 aa		5.49	□□□□□ -1.53
TIF11	YMR260C	CEM1	P39525	442 aa		5.49	□□□□□ -1.53
TIF11	YMR260C	ATG32	P40458	529 aa		5.49	□□□□□ -1.53
TIF11	YMR260C	YFL034W	P43564	1073 aa		5.49	□□□□□ -1.53
TIF11	YMR260C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	5.49	□□□□□ -1.53	RIP-Chip
TIF11	YMR260C	YDR461C-A	Q2V2P7	80 aa		5.49	□□□□□ -1.53
TIF11	YMR260C	TIF1	P10081	395 aa	Known RBP	5.48	□□□□□ -1.53
TIF11	YMR260C	MCM1	P11746	286 aa		5.48	□□□□□ -1.53
TIF11	YMR260C	AIM9	P40053	627 aa	Known RBP	5.48	□□□□□ -1.53
TIF11	YMR260C	UTP7	P40055	554 aa	Known RBP	5.48	□□□□□ -1.53
TIF11	YMR260C	ENO1	P00924	437 aa	Known RBP	5.47	□□□□□ -1.53
TIF11	YMR260C	PEP12	P32854	288 aa		5.47	□□□□□ -1.53
TIF11	YMR260C	SYT1	Q06836	1226 aa		5.47	□□□□□ -1.53
TIF11	YMR260C	SWI5	P08153	709 aa		5.46	□□□□□ -1.54
TIF11	YMR260C	SHM1	P37292	490 aa	Predicted RBP	5.46	□□□□□ -1.54
TIF11	YMR260C	RPL34B	P40525	121 aa	Known RBP	5.46	□□□□□ -1.54
TIF11	YMR260C	YMR265C	Q03508	461 aa	Known RBP	5.46	□□□□□ -1.54
TIF11	YMR260C	PUS1	Q12211	544 aa	Known RBP	5.46	□□□□□ -1.54
TIF11	YMR260C	PHM7	Q12252	991 aa		5.46	□□□□□ -1.54
TIF11	YMR260C	IRE1	P32361	1115 aa		5.45	□□□□□ -1.54
TIF11	YMR260C	SIS2	P36024	562 aa		5.45	□□□□□ -1.54
TIF11	YMR260C	ICP55	P40051	511 aa		5.45	□□□□□ -1.54
TIF11	YMR260C	ALA1	P40825	983 aa	Known RBP	5.45	□□□□□ -1.54
TIF11	YMR260C	RPS6A	P0CX37	236 aa	Known RBP	5.44	□□□□□ -1.54
TIF11	YMR260C	RPS6B	P0CX38	236 aa	Predicted RBP	5.44	□□□□□ -1.54
TIF11	YMR260C	RTG2	P32608	588 aa	Known RBP	5.44	□□□□□ -1.54
TIF11	YMR260C	KRE33	P53914	1056 aa	Known RBP	5.43	□□□□□ -1.54
TIF11	YMR260C	PSH1	Q12161	406 aa		5.43	□□□□□ -1.54
TIF11	YMR260C	TSC13	Q99190	310 aa		5.43	□□□□□ -1.54
TIF11	YMR260C	AI1	P03875	834 aa		5.42	□□□□□ -1.54
TIF11	YMR260C	PDC6	P26263	563 aa	Known RBP	5.42	□□□□□ -1.54
TIF11	YMR260C	ADE12	P80210	433 aa	Known RBP	5.42	□□□□□ -1.54
TIF11	YMR260C	RPS31	P05759	152 aa	Known RBP	5.41	□□□□□ -1.54
TIF11	YMR260C	LEU1	P07264	779 aa	Known RBP	5.41	□□□□□ -1.54
TIF11	YMR260C	UBP1	P25037	809 aa		5.41	□□□□□ -1.54
TIF11	YMR260C	NTH2	P35172	780 aa		5.4	□□□□□ -1.54
TIF11	YMR260C	YFL066C	P43538	392 aa		5.4	□□□□□ -1.54
TIF11	YMR260C	PHO87	P25360	923 aa		5.39	□□□□□ -1.55
TIF11	YMR260C	RPP1A	P05318	106 aa	Predicted RBP	5.38	□□□□□ -1.55
TIF11	YMR260C	NSG2	P53898	299 aa		5.38	□□□□□ -1.55
TIF11	YMR260C	GAS4	Q08271	471 aa		5.38	□□□□□ -1.55
TIF11	YMR260C	CYT1	P07143	309 aa		5.37	□□□□□ -1.55
TIF11	YMR260C	HAP4	P14064	554 aa		5.37	□□□□□ -1.55
TIF11	YMR260C	PDI1	P17967	522 aa	Known RBP	5.37	□□□□□ -1.55
TIF11	YMR260C	FPS1	P23900	669 aa		5.37	□□□□□ -1.55
TIF11	YMR260C	MRPL16	P38064	232 aa		5.37	□□□□□ -1.55
TIF11	YMR260C	ALD2	P47771	506 aa		5.37	□□□□□ -1.55
TIF11	YMR260C	UTP4	Q06679	776 aa	Known RBP	5.37	□□□□□ -1.55
TIF11	YMR260C	GPM1	P00950	247 aa	Known RBP	5.36	□□□□□ -1.55
TIF11	YMR260C	MDJ1	P35191	511 aa		5.36	□□□□□ -1.55
TIF11	YMR260C	SPR3	P41901	512 aa		5.36	□□□□□ -1.55
TIF11	YMR260C	ACS2	P52910	683 aa	Known RBP	5.36	□□□□□ -1.55
TIF11	YMR260C	YNL165W	P53891	406 aa		5.36	□□□□□ -1.55
TIF11	YMR260C	STB3	Q12427	513 aa		5.36	□□□□□ -1.55
TIF11	YMR260C	RGP1	P16664	663 aa		5.35	□□□□□ -1.55
TIF11	YMR260C	YTA6	P40328	754 aa		5.35	□□□□□ -1.55
TIF11	YMR260C	KNS1	P32350	737 aa	Predicted RBP	5.34	□□□□□ -1.55
TIF11	YMR260C	LSB3	P43603	459 aa	Known RBP	5.34	□□□□□ -1.55
TIF11	YMR260C	THI72	Q08579	599 aa		5.34	□□□□□ -1.55
TIF11	YMR260C	GAL2	P13181	574 aa		5.33	□□□□□ -1.56
TIF11	YMR260C	MLF3	P32047	452 aa		5.33	□□□□□ -1.56
TIF11	YMR260C	SCD5	P34758	872 aa		5.33	□□□□□ -1.56
TIF11	YMR260C	NGR1	P32831	672 aa	Known RBP	5.32	□□□□□ -1.56
TIF11	YMR260C	TY1A-DR2	Q03964	440 aa	Known RBP	5.32	□□□□□ -1.56
TIF11	YMR260C	YPR053C	Q6Q5F3	151 aa		5.32	□□□□□ -1.56
TIF11	YMR260C	PDC5	P16467	563 aa	Known RBP	5.31	□□□□□ -1.56
TIF11	YMR260C	TTI1	P36097	1038 aa		5.31	□□□□□ -1.56
TIF11	YMR260C	MCX1	P38323	520 aa	Predicted RBP	5.31	□□□□□ -1.56
TIF11	YMR260C	MSC7	P38694	644 aa		5.31	□□□□□ -1.56
TIF11	YMR260C	HXT5	P38695	592 aa		5.31	□□□□□ -1.56
TIF11	YMR260C	ROM1	P53046	1155 aa		5.31	□□□□□ -1.56
TIF11	YMR260C	Q0182	Q9ZZW1	134 aa		5.31	□□□□□ -1.56
TIF11	YMR260C	KTR7	P40504	517 aa		5.3	□□□□□ -1.56
TIF11	YMR260C	SBE2	P42223	864 aa	Known RBP	5.3	□□□□□ -1.56
TIF11	YMR260C	SKP1	P52286	194 aa		5.3	□□□□□ -1.56
TIF11	YMR260C	DMA2	P53924	522 aa		5.3	□□□□□ -1.56
TIF11	YMR260C	TDA6	Q06466	467 aa		5.3	□□□□□ -1.56
TIF11	YMR260C	TGL4	P36165	910 aa		5.29	□□□□□ -1.56
TIF11	YMR260C	SKN7	P38889	622 aa		5.29	□□□□□ -1.56
TIF11	YMR260C	CCT8	P47079	568 aa	Known RBP	5.29	□□□□□ -1.56
TIF11	YMR260C	HEH2	Q03281	663 aa		5.29	□□□□□ -1.56
TIF11	YMR260C	MET1	P36150	593 aa		5.28	□□□□□ -1.56
TIF11	YMR260C	RPC31	P17890	251 aa		5.27	□□□□□ -1.57
TIF11	YMR260C	VAN1	P23642	535 aa		5.27	□□□□□ -1.57
TIF11	YMR260C	YNR014W	P53719	212 aa		5.27	□□□□□ -1.57
TIF11	YMR260C	TRS33	Q99394	268 aa		5.27	□□□□□ -1.57
TIF11	YMR260C	BOI2	P39969	1040 aa		5.26	□□□□□ -1.57
TIF11	YMR260C	SBP1	P10080	294 aa	Known RBP	5.25	□□□□□ -1.57
TIF11	YMR260C	KAP122	P32767	1081 aa		5.25	□□□□□ -1.57
TIF11	YMR260C	MTO1	P53070	669 aa		5.25	□□□□□ -1.57
TIF11	YMR260C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	5.25	□□□□□ -1.57	not detected
TIF11	YMR260C	YMR187C	Q03236	431 aa		5.25	□□□□□ -1.57
TIF11	YMR260C	NCL1	P38205	684 aa	Known RBP	5.24	□□□□□ -1.57

Retrieved 100 of 5,963 RNA–protein pairs in 53.2 ms