RNA–Protein interactions for RNA: YMR128W

ECM16, Transcript of Essential DEAH-box ATP-dependent RNA helicase specific to U3 snoRNP, yeastyeast

Gene ECM16, Length 3,804 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM16YMR128W TY1A-ORP0CX59 440 aa4.64□□□□□ -1.67
ECM16YMR128W TY1A-PR2P0CX60 440 aa4.64□□□□□ -1.67
ECM16YMR128W TY1A-DR5P0CX65 440 aa4.64□□□□□ -1.67
ECM16YMR128W TY1A-ER2P0CX66 440 aa4.64□□□□□ -1.67
ECM16YMR128W TY1A-GR3P0CX67 440 aa4.64□□□□□ -1.67
ECM16YMR128W TY1A-LR1P0CX68 440 aa4.64□□□□□ -1.67
ECM16YMR128W TY1A-MR2P0CX69 440 aa4.64□□□□□ -1.67
ECM16YMR128W TY1A-JR2P47099 440 aa4.64□□□□□ -1.67
ECM16YMR128W TEA1P47988 759 aa4.64□□□□□ -1.67
ECM16YMR128W TY1A-DR1Q03856 440 aa4.64□□□□□ -1.67
ECM16YMR128W PUF6Q04373 656 aaKnown RBP4.64□□□□□ -1.67
ECM16YMR128W TY1A-ML1Q04706 440 aaKnown RBP4.64□□□□□ -1.67
ECM16YMR128W YPR084WQ06821 456 aa4.64□□□□□ -1.67
ECM16YMR128W TY1A-BRQ12217 440 aa4.64□□□□□ -1.67
ECM16YMR128W TY1A-NL2Q12470 440 aa4.64□□□□□ -1.67
ECM16YMR128W TY1A-GR2Q12485 440 aa4.64□□□□□ -1.67
ECM16YMR128W KRE5P22023 1365 aa4.64□□□□□ -1.67
ECM16YMR128W SET4P42948 560 aa4.64□□□□□ -1.67
ECM16YMR128W ENO2P00925 437 aaKnown RBP4.63□□□□□ -1.67
ECM16YMR128W MSP1P28737 362 aa4.63□□□□□ -1.67
ECM16YMR128W DCW1P36091 449 aa4.63□□□□□ -1.67
ECM16YMR128W IPL1P38991 367 aa4.63□□□□□ -1.67
ECM16YMR128W APL6P46682 809 aa4.63□□□□□ -1.67
ECM16YMR128W IOC4Q04213 475 aa4.63□□□□□ -1.67
ECM16YMR128W RAD59Q12223 238 aa4.63□□□□□ -1.67
ECM16YMR128W PPH3P32345 308 aa4.63□□□□□ -1.67
ECM16YMR128W TCB2P48231 1178 aa4.63□□□□□ -1.67
ECM16YMR128W AUS1Q08409 1394 aa4.63□□□□□ -1.67
ECM16YMR128W GEF1P37020 779 aa4.62□□□□□ -1.67
ECM16YMR128W CTR9P89105 1077 aa4.62□□□□□ -1.67
ECM16YMR128W TY1B-NL2Q99337 1749 aaKnown RBP4.62□□□□□ -1.67
ECM16YMR128W CPS1P27614 576 aa4.62□□□□□ -1.67
ECM16YMR128W TIF4632P39936 914 aaKnown RBP4.62□□□□□ -1.67
ECM16YMR128W RRP15Q06511 250 aaPredicted RBP4.62□□□□□ -1.67
ECM16YMR128W TRM3Q07527 1436 aa4.62□□□□□ -1.67
ECM16YMR128W RCM1P53972 490 aa4.61□□□□□ -1.67
ECM16YMR128W TRL1P09880 827 aaKnown RBP4.61□□□□□ -1.67
ECM16YMR128W ENO1P00924 437 aaKnown RBP4.61□□□□□ -1.67
ECM16YMR128W SLX8P40072 274 aa4.61□□□□□ -1.67
ECM16YMR128W PTC4P38089 393 aa4.6□□□□□ -1.67
ECM16YMR128W ARL1P38116 183 aaKnown RBP4.6□□□□□ -1.67
ECM16YMR128W PAP2P53632 584 aaKnown RBP4.6□□□□□ -1.67
ECM16YMR128W YNL108CP53929 270 aa4.6□□□□□ -1.67
ECM16YMR128W YPR109WQ06104 294 aa4.6□□□□□ -1.67
ECM16YMR128W TRP5P00931 707 aaKnown RBP4.6□□□□□ -1.67
ECM16YMR128W SSA1P10591 642 aaKnown RBP4.6□□□□□ -1.67
ECM16YMR128W KAR2P16474 682 aaKnown RBP4.6□□□□□ -1.67
ECM16YMR128W VPS24P36095 224 aaKnown RBP4.6□□□□□ -1.67
ECM16YMR128W MPC54Q08550 464 aa4.6□□□□□ -1.67
ECM16YMR128W YPR015CQ12531 247 aa4.59□□□□□ -1.67
ECM16YMR128W BNI1P41832 1953 aa4.59□□□□□ -1.67
ECM16YMR128W EDE1P34216 1381 aa4.59□□□□□ -1.67
ECM16YMR128W VNX1P42839 908 aa4.59□□□□□ -1.68
ECM16YMR128W YPP1P46951 817 aa4.59□□□□□ -1.68
ECM16YMR128W STR2P47164 639 aa4.59□□□□□ -1.68
ECM16YMR128W USO1P25386 1790 aa4.59□□□□□ -1.68
ECM16YMR128W SSA2P10592 639 aaKnown RBP4.58□□□□□ -1.68
ECM16YMR128W KTR2P33550 425 aa4.58□□□□□ -1.68
ECM16YMR128W MAK16P10962 306 aaPredicted RBP4.58□□□□□ -1.68
ECM16YMR128W DUR1,2P32528 1835 aaKnown RBP4.57□□□□□ -1.68
ECM16YMR128W NOT3P06102 836 aaKnown RBP4.57□□□□□ -1.68
ECM16YMR128W PSK1P31374 1356 aa4.57□□□□□ -1.68
ECM16YMR128W YIL177CP40434 1758 aa4.57□□□□□ -1.68
ECM16YMR128W YJL225CP40889 1758 aa4.57□□□□□ -1.68
ECM16YMR128W MSB4Q12317 492 aa4.57□□□□□ -1.68
ECM16YMR128W PAM1P37304 830 aaKnown RBP4.57□□□□□ -1.68
ECM16YMR128W YGL081WP53156 320 aa4.57□□□□□ -1.68
ECM16YMR128W CSC1Q06538 782 aa4.57□□□□□ -1.68
ECM16YMR128W ITC1P53125 1264 aa4.56□□□□□ -1.68
ECM16YMR128W YBL029C-AQ3E756 94 aa4.56□□□□□ -1.68
ECM16YMR128W HTA1P04911 132 aaKnown RBP4.56□□□□□ -1.68
ECM16YMR128W HTA2P04912 132 aa4.56□□□□□ -1.68
ECM16YMR128W SRS2P12954 1174 aa4.56□□□□□ -1.68
ECM16YMR128W RTG2P32608 588 aaKnown RBP4.56□□□□□ -1.68
ECM16YMR128W BRN1P38170 754 aa4.56□□□□□ -1.68
ECM16YMR128W NPA3P47122 385 aa4.56□□□□□ -1.68
ECM16YMR128W PDR1P12383 1068 aa4.56□□□□□ -1.68
ECM16YMR128W BUB1P41695 1021 aaKnown RBP RIP-Chip data4.56□□□□□ -1.68not detected
ECM16YMR128W NKP2Q06162 153 aa4.56□□□□□ -1.68
ECM16YMR128W LSP1Q12230 341 aaKnown RBP4.56□□□□□ -1.68
ECM16YMR128W DLD1P32891 587 aa4.55□□□□□ -1.68
ECM16YMR128W HXT13P39924 564 aa4.55□□□□□ -1.68
ECM16YMR128W BUD27P43573 796 aaKnown RBP RIP-Chip data4.55□□□□□ -1.68not detected
ECM16YMR128W HXT17P53631 564 aa4.55□□□□□ -1.68
ECM16YMR128W GAS4Q08271 471 aa4.55□□□□□ -1.68
ECM16YMR128W SIR4P11978 1358 aa4.55□□□□□ -1.68
ECM16YMR128W YBR287WP38355 427 aa4.55□□□□□ -1.68
ECM16YMR128W TUM1Q08686 304 aaKnown RBP4.55□□□□□ -1.68
ECM16YMR128W BRL1P38770 471 aa4.55□□□□□ -1.68
ECM16YMR128W RRT14P40470 206 aa4.55□□□□□ -1.68
ECM16YMR128W SSF1P38789 453 aaPredicted RBP4.54□□□□□ -1.68
ECM16YMR128W YGR122WP53272 402 aa4.54□□□□□ -1.68
ECM16YMR128W TAP42Q04372 366 aa4.54□□□□□ -1.68
ECM16YMR128W MMP1Q12372 583 aa4.54□□□□□ -1.68
ECM16YMR128W APC1P53886 1748 aa4.54□□□□□ -1.68
ECM16YMR128W NUP145P49687 1317 aa4.54□□□□□ -1.68
ECM16YMR128W RSC1P53236 928 aa4.54□□□□□ -1.68
ECM16YMR128W SPO1P53541 631 aa4.54□□□□□ -1.68
ECM16YMR128W DSD1P53095 428 aa4.54□□□□□ -1.68
ECM16YMR128W CSI1Q04368 295 aa4.54□□□□□ -1.68
Retrieved 100 of 5,963 RNA–protein pairs in 8.4 ms