RNA–Protein interactions for RNA: YLR360W

VPS38, Transcript of Part of a Vps34p phosphatidylinositol 3-kinase complex, yeastyeast

Gene VPS38, Length 1,320 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS38YLR360W OPT2Q06593 877 aa6.44□□□□□ -1.38
VPS38YLR360W YDL176WQ12027 708 aa6.44□□□□□ -1.38
VPS38YLR360W SWI5P08153 709 aa6.43□□□□□ -1.38
VPS38YLR360W SUB2Q07478 446 aaKnown RBP6.43□□□□□ -1.38
VPS38YLR360W TCB1Q12466 1186 aa6.43□□□□□ -1.38
VPS38YLR360W RPS6AP0CX37 236 aaKnown RBP6.42□□□□□ -1.38
VPS38YLR360W RPS6BP0CX38 236 aaPredicted RBP6.42□□□□□ -1.38
VPS38YLR360W UBX7P38349 436 aa6.42□□□□□ -1.38
VPS38YLR360W ALA1P40825 983 aaKnown RBP6.41□□□□□ -1.38
VPS38YLR360W UBP2Q01476 1272 aa6.41□□□□□ -1.38
VPS38YLR360W NOB1Q08444 459 aaKnown RBP6.41□□□□□ -1.38
VPS38YLR360W SUM1P46676 1062 aa6.4□□□□□ -1.39
VPS38YLR360W YML083CQ04526 418 aa6.4□□□□□ -1.39
VPS38YLR360W ROM1P53046 1155 aa6.39□□□□□ -1.39
VPS38YLR360W GAS4Q08271 471 aa6.39□□□□□ -1.39
VPS38YLR360W CYT1P07143 309 aa6.38□□□□□ -1.39
VPS38YLR360W SCW11P53189 542 aa6.38□□□□□ -1.39
VPS38YLR360W GLY1P37303 387 aaKnown RBP6.37□□□□□ -1.39
VPS38YLR360W SSN3P39073 555 aa6.36□□□□□ -1.39
VPS38YLR360W VAN1P23642 535 aa6.35□□□□□ -1.39
VPS38YLR360W DAL1P32375 460 aa6.35□□□□□ -1.39
VPS38YLR360W MSN5P52918 1224 aa6.35□□□□□ -1.39
VPS38YLR360W AHP1P38013 176 aaKnown RBP6.34□□□□□ -1.39
VPS38YLR360W CAF120P53836 1060 aa6.34□□□□□ -1.39
VPS38YLR360W TY1A-BLQ12266 440 aa6.34□□□□□ -1.39
VPS38YLR360W OSH7P38755 437 aa6.33□□□□□ -1.4
VPS38YLR360W VTC4P47075 721 aa6.33□□□□□ -1.4
VPS38YLR360W RPL34AP87262 121 aaPredicted RBP6.33□□□□□ -1.4
VPS38YLR360W YPQ2Q06328 317 aa6.33□□□□□ -1.4
VPS38YLR360W TRS33Q99394 268 aa6.32□□□□□ -1.4
VPS38YLR360W SSA1P10591 642 aaKnown RBP6.31□□□□□ -1.4
VPS38YLR360W ACO2P39533 789 aa6.31□□□□□ -1.4
VPS38YLR360W UBP1P25037 809 aa6.3□□□□□ -1.4
VPS38YLR360W JJJ2P46997 583 aa6.3□□□□□ -1.4
VPS38YLR360W CWH41P53008 833 aa6.3□□□□□ -1.4
VPS38YLR360W PUN1Q06991 263 aa6.3□□□□□ -1.4
VPS38YLR360W IRE1P32361 1115 aa6.29□□□□□ -1.4
VPS38YLR360W SLA1P32790 1244 aa6.29□□□□□ -1.4
VPS38YLR360W NGR1P32831 672 aaKnown RBP6.29□□□□□ -1.4
VPS38YLR360W PUF6Q04373 656 aaKnown RBP6.29□□□□□ -1.4
VPS38YLR360W CDC19P00549 500 aaKnown RBP6.28□□□□□ -1.4
VPS38YLR360W MCM1P11746 286 aa6.28□□□□□ -1.4
VPS38YLR360W SHM1P37292 490 aaPredicted RBP6.28□□□□□ -1.4
VPS38YLR360W TY1A-DR3Q12441 440 aa6.28□□□□□ -1.4
VPS38YLR360W YIR007WP40566 764 aa6.27□□□□□ -1.41
VPS38YLR360W Q0182Q9ZZW1 134 aa6.27□□□□□ -1.41
VPS38YLR360W UBP15P50101 1230 aa6.26□□□□□ -1.41
VPS38YLR360W YNL165WP53891 406 aa6.26□□□□□ -1.41
VPS38YLR360W SUV3P32580 737 aa6.25□□□□□ -1.41
VPS38YLR360W YTA6P40328 754 aa6.25□□□□□ -1.41
VPS38YLR360W ROG3P43602 733 aa6.25□□□□□ -1.41
VPS38YLR360W CWC15Q03772 175 aaKnown RBP6.25□□□□□ -1.41
VPS38YLR360W RPS31P05759 152 aaKnown RBP6.25□□□□□ -1.41
VPS38YLR360W MLF3P32047 452 aa6.25□□□□□ -1.41
VPS38YLR360W ALD4P46367 519 aaKnown RBP6.25□□□□□ -1.41
VPS38YLR360W NAM8Q00539 523 aaKnown RBP6.25□□□□□ -1.41
VPS38YLR360W FOX2Q02207 900 aaKnown RBP6.25□□□□□ -1.41
VPS38YLR360W TY1A-MR1Q04215 440 aa6.25□□□□□ -1.41
VPS38YLR360W SRS2P12954 1174 aa6.24□□□□□ -1.41
VPS38YLR360W PDC6P26263 563 aaKnown RBP6.24□□□□□ -1.41
VPS38YLR360W GEF1P37020 779 aa6.24□□□□□ -1.41
VPS38YLR360W SCD5P34758 872 aa6.23□□□□□ -1.41
VPS38YLR360W HXT5P38695 592 aa6.23□□□□□ -1.41
VPS38YLR360W PNP1Q05788 311 aa6.23□□□□□ -1.41
VPS38YLR360W PSH1Q12161 406 aa6.23□□□□□ -1.41
VPS38YLR360W TPS3P38426 1054 aaKnown RBP6.22□□□□□ -1.41
VPS38YLR360W YBR197CP38306 217 aa6.21□□□□□ -1.42
VPS38YLR360W CAB1Q04430 367 aa6.21□□□□□ -1.42
VPS38YLR360W MTO1P53070 669 aa6.2□□□□□ -1.42
VPS38YLR360W CUZ1P53899 274 aa6.2□□□□□ -1.42
VPS38YLR360W YMR265CQ03508 461 aaKnown RBP6.2□□□□□ -1.42
VPS38YLR360W CCP1P00431 361 aa6.19□□□□□ -1.42
VPS38YLR360W ISC10P32645 267 aa6.19□□□□□ -1.42
VPS38YLR360W MRPL16P38064 232 aa6.19□□□□□ -1.42
VPS38YLR360W YGR035CP53222 116 aa6.19□□□□□ -1.42
VPS38YLR360W FUR4P05316 633 aaKnown RBP6.18□□□□□ -1.42
VPS38YLR360W RRN6P32786 894 aa6.18□□□□□ -1.42
VPS38YLR360W HPF1Q05164 967 aa6.18□□□□□ -1.42
VPS38YLR360W UTP4Q06679 776 aaKnown RBP6.18□□□□□ -1.42
VPS38YLR360W STB3Q12427 513 aa6.18□□□□□ -1.42
VPS38YLR360W LEU1P07264 779 aaKnown RBP6.17□□□□□ -1.42
VPS38YLR360W MRPL33P20084 86 aa6.17□□□□□ -1.42
VPS38YLR360W DIT1P21623 536 aa6.17□□□□□ -1.42
VPS38YLR360W TRK2P28584 889 aa6.17□□□□□ -1.42
VPS38YLR360W CDC3P32457 520 aaKnown RBP6.17□□□□□ -1.42
VPS38YLR360W ALD2P47771 506 aa6.17□□□□□ -1.42
VPS38YLR360W KRE33P53914 1056 aaKnown RBP6.17□□□□□ -1.42
VPS38YLR360W KAR5Q04746 504 aa6.17□□□□□ -1.42
VPS38YLR360W KAP122P32767 1081 aa6.16□□□□□ -1.42
VPS38YLR360W CEM1P39525 442 aa6.16□□□□□ -1.42
VPS38YLR360W QDR2P40474 542 aa6.16□□□□□ -1.42
VPS38YLR360W ADE12P80210 433 aaKnown RBP6.16□□□□□ -1.42
VPS38YLR360W VMA3P25515 160 aa6.15□□□□□ -1.43
VPS38YLR360W RGP1P16664 663 aa6.14□□□□□ -1.43
VPS38YLR360W BOL3P39724 118 aa6.13□□□□□ -1.43
VPS38YLR360W FPS1P23900 669 aa6.12□□□□□ -1.43
VPS38YLR360W LDH1P38139 375 aa6.12□□□□□ -1.43
VPS38YLR360W DYS1P38791 387 aa6.12□□□□□ -1.43
VPS38YLR360W SPR3P41901 512 aa6.12□□□□□ -1.43
VPS38YLR360W LYS5P50113 272 aa6.12□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 32.4 ms