RNA–Protein interactions for RNA: YLR228C

ECM22, Transcript of Sterol regulatory element binding protein, yeast

Gene ECM22, Length 2,445 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ECM22	YLR228C	ARP5	P53946	755 aa		4.65	□□□□□ -1.66
ECM22	YLR228C	RRP14	P36080	434 aa	Known RBP	4.65	□□□□□ -1.67
ECM22	YLR228C	VPS29	P38759	282 aa		4.65	□□□□□ -1.67
ECM22	YLR228C	RTT107	P38850	1070 aa		4.65	□□□□□ -1.67
ECM22	YLR228C	STU2	P46675	888 aa		4.65	□□□□□ -1.67
ECM22	YLR228C	SML1	Q04964	104 aa		4.65	□□□□□ -1.67
ECM22	YLR228C	PUS1	Q12211	544 aa	Known RBP	4.65	□□□□□ -1.67
ECM22	YLR228C	VTH1	P40438	1549 aa		4.65	□□□□□ -1.67
ECM22	YLR228C	VTH2	P40890	1549 aa		4.65	□□□□□ -1.67
ECM22	YLR228C	DAL5	P15365	543 aa		4.64	□□□□□ -1.67
ECM22	YLR228C	MRS2	Q01926	470 aa		4.64	□□□□□ -1.67
ECM22	YLR228C	YOL087C	Q99247	1116 aa		4.64	□□□□□ -1.67
ECM22	YLR228C	YBT1	P32386	1661 aa		4.64	□□□□□ -1.67
ECM22	YLR228C	HTA1	P04911	132 aa	Known RBP	4.64	□□□□□ -1.67
ECM22	YLR228C	HTA2	P04912	132 aa		4.64	□□□□□ -1.67
ECM22	YLR228C	PUP2	P32379	260 aa		4.64	□□□□□ -1.67
ECM22	YLR228C	PTC4	P38089	393 aa		4.64	□□□□□ -1.67
ECM22	YLR228C	CEP3	P40969	608 aa		4.64	□□□□□ -1.67
ECM22	YLR228C	SPT5	P27692	1063 aa	Known RBP	4.63	□□□□□ -1.67
ECM22	YLR228C	RPN12	P32496	274 aa		4.63	□□□□□ -1.67
ECM22	YLR228C	MPP10	P47083	593 aa	Known RBP	4.63	□□□□□ -1.67
ECM22	YLR228C	POL32	P47110	350 aa		4.63	□□□□□ -1.67
ECM22	YLR228C	IOC4	Q04213	475 aa		4.63	□□□□□ -1.67
ECM22	YLR228C	GCN2	P15442	1659 aa		4.63	□□□□□ -1.67
ECM22	YLR228C	ZUO1	P32527	433 aa	Known RBP	4.63	□□□□□ -1.67
ECM22	YLR228C	VPS41	P38959	992 aa		4.63	□□□□□ -1.67
ECM22	YLR228C	MDM38	Q08179	573 aa		4.63	□□□□□ -1.67
ECM22	YLR228C	GYP5	Q12344	894 aa		4.63	□□□□□ -1.67
ECM22	YLR228C	TOP1	P04786	769 aa		4.62	□□□□□ -1.67
ECM22	YLR228C	RVS167	P39743	482 aa	Known RBP	4.62	□□□□□ -1.67
ECM22	YLR228C	CIR1	P42940	261 aa		4.62	□□□□□ -1.67
ECM22	YLR228C	TIM50	Q02776	476 aa		4.62	□□□□□ -1.67
ECM22	YLR228C	VPS30	Q02948	557 aa		4.62	□□□□□ -1.67
ECM22	YLR228C	MNR2	P35724	969 aa		4.62	□□□□□ -1.67
ECM22	YLR228C	PRP31	P49704	494 aa	Predicted RBP	4.62	□□□□□ -1.67
ECM22	YLR228C	TLG2	Q08144	397 aa		4.62	□□□□□ -1.67
ECM22	YLR228C	SEC39	Q12745	709 aa		4.62	□□□□□ -1.67
ECM22	YLR228C	PDR5	P33302	1511 aa	Known RBP	4.61	□□□□□ -1.67
ECM22	YLR228C	RAD3	P06839	778 aa		4.61	□□□□□ -1.67
ECM22	YLR228C	RPS0A	P32905	252 aa	Known RBP	4.61	□□□□□ -1.67
ECM22	YLR228C	STS1	P38637	319 aa		4.61	□□□□□ -1.67
ECM22	YLR228C	YAP3	P38749	330 aa		4.61	□□□□□ -1.67
ECM22	YLR228C	ERV41	Q04651	352 aa		4.61	□□□□□ -1.67
ECM22	YLR228C	RRP15	Q06511	250 aa	Predicted RBP	4.61	□□□□□ -1.67
ECM22	YLR228C	SLD2	P34252	453 aa		4.61	□□□□□ -1.67
ECM22	YLR228C	RTG3	P38165	486 aa		4.61	□□□□□ -1.67
ECM22	YLR228C	PBY1	P38254	753 aa		4.61	□□□□□ -1.67
ECM22	YLR228C	RRT14	P40470	206 aa		4.61	□□□□□ -1.67
ECM22	YLR228C	RSM25	P40496	264 aa		4.61	□□□□□ -1.67
ECM22	YLR228C	RSC8	P43609	557 aa	Known RBP	4.61	□□□□□ -1.67
ECM22	YLR228C	ELP4	Q02884	456 aa	Known RBP	4.61	□□□□□ -1.67
ECM22	YLR228C	PUF6	Q04373	656 aa	Known RBP	4.61	□□□□□ -1.67
ECM22	YLR228C	YKL068W-A	Q3E826	78 aa		4.61	□□□□□ -1.67
ECM22	YLR228C	MET10	P39692	1035 aa		4.6	□□□□□ -1.67
ECM22	YLR228C	YEL023C	P39992	682 aa		4.6	□□□□□ -1.67
ECM22	YLR228C	POM152	P39685	1337 aa		4.6	□□□□□ -1.67
ECM22	YLR228C	MAC1	P35192	417 aa		4.6	□□□□□ -1.67
ECM22	YLR228C	DCW1	P36091	449 aa		4.6	□□□□□ -1.67
ECM22	YLR228C	YIL092W	P40497	633 aa		4.6	□□□□□ -1.67
ECM22	YLR228C	ROM2	P51862	1356 aa	Known RBP	4.59	□□□□□ -1.67
ECM22	YLR228C	MSH1	P25846	959 aa		4.59	□□□□□ -1.67
ECM22	YLR228C	MRPL10	P36520	322 aa		4.59	□□□□□ -1.67
ECM22	YLR228C	DSF2	P38213	736 aa		4.59	□□□□□ -1.67
ECM22	YLR228C	YNL050C	P53952	270 aa		4.59	□□□□□ -1.67
ECM22	YLR228C	APC11	Q12157	165 aa		4.59	□□□□□ -1.67
ECM22	YLR228C	SUP35	P05453	685 aa	Known RBP	4.58	□□□□□ -1.68
ECM22	YLR228C	MRC1	P25588	1096 aa		4.58	□□□□□ -1.68
ECM22	YLR228C	TAF5	P38129	798 aa		4.58	□□□□□ -1.68
ECM22	YLR228C	BDH2	P39713	417 aa		4.58	□□□□□ -1.68
ECM22	YLR228C	NPA3	P47122	385 aa		4.58	□□□□□ -1.68
ECM22	YLR228C	SLP1	Q12232	587 aa		4.58	□□□□□ -1.68
ECM22	YLR228C	YVC1	Q12324	675 aa		4.58	□□□□□ -1.68
ECM22	YLR228C	NUP145	P49687	1317 aa		4.58	□□□□□ -1.68
ECM22	YLR228C	NUP188	P52593	1655 aa	Known RBP	4.58	□□□□□ -1.68
ECM22	YLR228C	TRK1	P12685	1235 aa		4.58	□□□□□ -1.68
ECM22	YLR228C	DID4	P36108	232 aa		4.58	□□□□□ -1.68
ECM22	YLR228C	PXR1	P53335	271 aa	Predicted RBP	4.58	□□□□□ -1.68
ECM22	YLR228C	GYL1	Q04322	720 aa		4.58	□□□□□ -1.68
ECM22	YLR228C	TY1B-A	O13527	1196 aa	Known RBP	4.57	□□□□□ -1.68
ECM22	YLR228C	RPC82	P32349	654 aa		4.57	□□□□□ -1.68
ECM22	YLR228C	NDC80	P40460	691 aa		4.57	□□□□□ -1.68
ECM22	YLR228C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
ECM22	YLR228C	HST1	P53685	503 aa		4.57	□□□□□ -1.68
ECM22	YLR228C	KRE33	P53914	1056 aa	Known RBP	4.57	□□□□□ -1.68
ECM22	YLR228C	PEX19	Q07418	342 aa		4.57	□□□□□ -1.68
ECM22	YLR228C	GIN4	Q12263	1142 aa		4.57	□□□□□ -1.68
ECM22	YLR228C	KAR3	P17119	729 aa		4.57	□□□□□ -1.68
ECM22	YLR228C	HSP104	P31539	908 aa	Known RBP	4.57	□□□□□ -1.68
ECM22	YLR228C	DPH5	P32469	300 aa	Predicted RBP	4.57	□□□□□ -1.68
ECM22	YLR228C	RIO2	P40160	425 aa	Known RBP	4.57	□□□□□ -1.68
ECM22	YLR228C	HOS4	P40480	1083 aa		4.57	□□□□□ -1.68
ECM22	YLR228C	SAP155	P43612	1002 aa		4.57	□□□□□ -1.68
ECM22	YLR228C	DNM1	P54861	757 aa		4.57	□□□□□ -1.68
ECM22	YLR228C	VPS20	Q04272	221 aa		4.57	□□□□□ -1.68
ECM22	YLR228C	YPL225W	Q08971	146 aa	Known RBP	4.57	□□□□□ -1.68
ECM22	YLR228C	YLL054C	Q12244	843 aa		4.57	□□□□□ -1.68
ECM22	YLR228C	SES1	P07284	462 aa	Known RBP	4.56	□□□□□ -1.68
ECM22	YLR228C	MAK11	P20484	414 aa	Known RBP	4.56	□□□□□ -1.68
ECM22	YLR228C	OLA1	P38219	394 aa	Known RBP	4.56	□□□□□ -1.68
ECM22	YLR228C	RFC1	P38630	861 aa	Known RBP	4.56	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 138.3 ms