RNA–Protein interactions for RNA: YKR098C

UBP11, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP11, Length 2,154 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP11YKR098C POL32P47110 350 aa3.41□□□□□ -1.86
UBP11YKR098C GYP1Q08484 637 aa3.41□□□□□ -1.86
UBP11YKR098C FRT1Q99332 602 aa3.41□□□□□ -1.86
UBP11YKR098C KIP2P28743 706 aa3.4□□□□□ -1.87
UBP11YKR098C NUT2Q06213 157 aa3.4□□□□□ -1.87
UBP11YKR098C LSO1Q3E827 93 aa3.4□□□□□ -1.87
UBP11YKR098C SWI5P08153 709 aa3.39□□□□□ -1.87
UBP11YKR098C RPS6AP0CX37 236 aaKnown RBP3.39□□□□□ -1.87
UBP11YKR098C RPS6BP0CX38 236 aaPredicted RBP3.39□□□□□ -1.87
UBP11YKR098C NGR1P32831 672 aaKnown RBP3.39□□□□□ -1.87
UBP11YKR098C APP1P53933 587 aa3.39□□□□□ -1.87
UBP11YKR098C CYT1P07143 309 aa3.39□□□□□ -1.87
UBP11YKR098C BOI1P38041 980 aaKnown RBP3.39□□□□□ -1.87
UBP11YKR098C THI12P42883 340 aa3.39□□□□□ -1.87
UBP11YKR098C THI5P43534 340 aa3.39□□□□□ -1.87
UBP11YKR098C THI11P47183 340 aa3.39□□□□□ -1.87
UBP11YKR098C ISU1Q03020 165 aa3.39□□□□□ -1.87
UBP11YKR098C SRC1Q03707 834 aa3.39□□□□□ -1.87
UBP11YKR098C THI13Q07748 340 aa3.39□□□□□ -1.87
UBP11YKR098C SPT2P06843 333 aaPredicted RBP3.38□□□□□ -1.87
UBP11YKR098C MET4P32389 672 aa3.38□□□□□ -1.87
UBP11YKR098C BDP1P46678 594 aa3.38□□□□□ -1.87
UBP11YKR098C SYH1Q02875 849 aaKnown RBP3.38□□□□□ -1.87
UBP11YKR098C PUS5Q06244 254 aa3.38□□□□□ -1.87
UBP11YKR098C STB3Q12427 513 aa3.38□□□□□ -1.87
UBP11YKR098C SDH2P21801 266 aa3.38□□□□□ -1.87
UBP11YKR098C MRF1P30775 413 aaPredicted RBP3.38□□□□□ -1.87
UBP11YKR098C FBP26P32604 452 aa3.38□□□□□ -1.87
UBP11YKR098C YBR197CP38306 217 aa3.38□□□□□ -1.87
UBP11YKR098C CWH41P53008 833 aa3.38□□□□□ -1.87
UBP11YKR098C UTR2P32623 467 aa3.37□□□□□ -1.87
UBP11YKR098C CAB1Q04430 367 aa3.37□□□□□ -1.87
UBP11YKR098C SEC8P32855 1065 aa3.36□□□□□ -1.87
UBP11YKR098C ISC10P32645 267 aa3.36□□□□□ -1.87
UBP11YKR098C MKS1P34072 584 aa3.36□□□□□ -1.87
UBP11YKR098C SPR3P41901 512 aa3.36□□□□□ -1.87
UBP11YKR098C YJR107WP47145 328 aa3.36□□□□□ -1.87
UBP11YKR098C OYE2Q03558 400 aaKnown RBP3.36□□□□□ -1.87
UBP11YKR098C TRS120Q04183 1289 aa3.36□□□□□ -1.87
UBP11YKR098C GPI13Q07830 1017 aa3.36□□□□□ -1.87
UBP11YKR098C APC11Q12157 165 aa3.36□□□□□ -1.87
UBP11YKR098C STE6P12866 1290 aa3.35□□□□□ -1.87
UBP11YKR098C MRT4P33201 236 aaKnown RBP3.35□□□□□ -1.87
UBP11YKR098C CST6P40535 587 aa3.35□□□□□ -1.87
UBP11YKR098C SVF1Q05515 481 aa3.35□□□□□ -1.87
UBP11YKR098C DAT1P13483 248 aaKnown RBP3.35□□□□□ -1.87
UBP11YKR098C KTR2P33550 425 aa3.35□□□□□ -1.87
UBP11YKR098C MGE1P38523 228 aa3.35□□□□□ -1.87
UBP11YKR098C FOX2Q02207 900 aaKnown RBP3.35□□□□□ -1.87
UBP11YKR098C FRK1Q03002 865 aaPredicted RBP3.35□□□□□ -1.87
UBP11YKR098C MNL2Q12205 849 aa3.35□□□□□ -1.87
UBP11YKR098C RPB10P22139 70 aa3.34□□□□□ -1.87
UBP11YKR098C TBS1P38114 1094 aa3.34□□□□□ -1.87
UBP11YKR098C YBL086CP38177 466 aa3.34□□□□□ -1.87
UBP11YKR098C YPQ2Q06328 317 aa3.34□□□□□ -1.87
UBP11YKR098C MET1P36150 593 aa3.34□□□□□ -1.88
UBP11YKR098C HXT5P38695 592 aa3.34□□□□□ -1.88
UBP11YKR098C WTM2Q12206 467 aa3.34□□□□□ -1.88
UBP11YKR098C PHO4P07270 312 aaKnown RBP3.33□□□□□ -1.88
UBP11YKR098C UFD2P54860 961 aa3.33□□□□□ -1.88
UBP11YKR098C DFG5Q05031 458 aa3.33□□□□□ -1.88
UBP11YKR098C RPP2BP02400 110 aaKnown RBP3.32□□□□□ -1.88
UBP11YKR098C MCM1P11746 286 aa3.32□□□□□ -1.88
UBP11YKR098C MRPL33P20084 86 aa3.32□□□□□ -1.88
UBP11YKR098C FYV10P40492 516 aa3.32□□□□□ -1.88
UBP11YKR098C BDS1Q08347 646 aa3.32□□□□□ -1.88
UBP11YKR098C OCA5P38738 679 aa3.32□□□□□ -1.88
UBP11YKR098C UTP7P40055 554 aaKnown RBP3.32□□□□□ -1.88
UBP11YKR098C DAK2P43550 591 aa3.32□□□□□ -1.88
UBP11YKR098C SUM1P46676 1062 aa3.32□□□□□ -1.88
UBP11YKR098C RPT1P33299 467 aaKnown RBP3.31□□□□□ -1.88
UBP11YKR098C SCD5P34758 872 aa3.31□□□□□ -1.88
UBP11YKR098C JIP5Q06214 492 aaPredicted RBP3.31□□□□□ -1.88
UBP11YKR098C MAG2Q06436 670 aaKnown RBP3.31□□□□□ -1.88
UBP11YKR098C YTA7P40340 1379 aa3.31□□□□□ -1.88
UBP11YKR098C SUT1P53032 299 aaKnown RBP3.31□□□□□ -1.88
UBP11YKR098C HED1Q03937 162 aa3.31□□□□□ -1.88
UBP11YKR098C GCD6P32501 712 aaKnown RBP3.3□□□□□ -1.88
UBP11YKR098C YNL011CP53980 444 aa3.3□□□□□ -1.88
UBP11YKR098C CDC55Q00362 526 aa3.3□□□□□ -1.88
UBP11YKR098C SPR28Q04921 423 aa3.3□□□□□ -1.88
UBP11YKR098C VMA3P25515 160 aa3.29□□□□□ -1.88
UBP11YKR098C MCM2P29469 868 aa3.29□□□□□ -1.88
UBP11YKR098C DLD3P39976 496 aaKnown RBP3.29□□□□□ -1.88
UBP11YKR098C YNL165WP53891 406 aa3.29□□□□□ -1.88
UBP11YKR098C UTP4Q06679 776 aaKnown RBP3.29□□□□□ -1.88
UBP11YKR098C NAP1P25293 417 aaKnown RBP3.29□□□□□ -1.88
UBP11YKR098C HXT8P40886 569 aa3.29□□□□□ -1.88
UBP11YKR098C SMC1P32908 1225 aa3.28□□□□□ -1.88
UBP11YKR098C VPS35P34110 944 aa3.28□□□□□ -1.88
UBP11YKR098C RTT106P40161 455 aa3.28□□□□□ -1.88
UBP11YKR098C RSC4Q02206 625 aa3.28□□□□□ -1.88
UBP11YKR098C Q0182Q9ZZW1 134 aa3.28□□□□□ -1.88
UBP11YKR098C NNF1P47149 201 aa3.28□□□□□ -1.88
UBP11YKR098C SAM37P50110 327 aa3.28□□□□□ -1.88
UBP11YKR098C MET32Q12041 191 aa3.28□□□□□ -1.88
UBP11YKR098C MLF3P32047 452 aa3.27□□□□□ -1.89
UBP11YKR098C LDH1P38139 375 aa3.27□□□□□ -1.89
UBP11YKR098C SSN3P39073 555 aa3.27□□□□□ -1.89
UBP11YKR098C RPS26AP39938 119 aaKnown RBP3.27□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 163.7 ms