RNA–Protein interactions for RNA: YKL039W

PTM1, Transcript of Protein of unknown function, yeastyeast

Gene PTM1, Length 1,572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTM1YKL039W MET22P32179 357 aa7.64□□□□□ -1.19
PTM1YKL039W SUM1P46676 1062 aa7.63□□□□□ -1.19
PTM1YKL039W YPQ2Q06328 317 aa7.63□□□□□ -1.19
PTM1YKL039W CYT1P07143 309 aa7.63□□□□□ -1.19
PTM1YKL039W SSA1P10591 642 aaKnown RBP7.63□□□□□ -1.19
PTM1YKL039W UBP1P25037 809 aa7.63□□□□□ -1.19
PTM1YKL039W OPT2Q06593 877 aa7.63□□□□□ -1.19
PTM1YKL039W LCB5Q06147 687 aaKnown RBP7.62□□□□□ -1.19
PTM1YKL039W SSN3P39073 555 aa7.61□□□□□ -1.19
PTM1YKL039W YDR444WQ04093 687 aa7.61□□□□□ -1.19
PTM1YKL039W TCB1Q12466 1186 aa7.61□□□□□ -1.19
PTM1YKL039W GLY1P37303 387 aaKnown RBP7.6□□□□□ -1.19
PTM1YKL039W VTC4P47075 721 aa7.6□□□□□ -1.19
PTM1YKL039W MSN5P52918 1224 aa7.59□□□□□ -1.19
PTM1YKL039W YLR346CQ06139 101 aa7.59□□□□□ -1.19
PTM1YKL039W MCM1P11746 286 aa7.59□□□□□ -1.2
PTM1YKL039W VAN1P23642 535 aa7.58□□□□□ -1.2
PTM1YKL039W DAL1P32375 460 aa7.57□□□□□ -1.2
PTM1YKL039W UBP2Q01476 1272 aa7.56□□□□□ -1.2
PTM1YKL039W TY1A-DR3Q12441 440 aa7.56□□□□□ -1.2
PTM1YKL039W TRS33Q99394 268 aa7.56□□□□□ -1.2
PTM1YKL039W SUV3P32580 737 aa7.55□□□□□ -1.2
PTM1YKL039W SLA1P32790 1244 aa7.55□□□□□ -1.2
PTM1YKL039W NGR1P32831 672 aaKnown RBP7.55□□□□□ -1.2
PTM1YKL039W JJJ2P46997 583 aa7.55□□□□□ -1.2
PTM1YKL039W PUF6Q04373 656 aaKnown RBP7.55□□□□□ -1.2
PTM1YKL039W TY1A-BLQ12266 440 aa7.55□□□□□ -1.2
PTM1YKL039W GEF1P37020 779 aa7.54□□□□□ -1.2
PTM1YKL039W SHM1P37292 490 aaPredicted RBP7.54□□□□□ -1.2
PTM1YKL039W ALA1P40825 983 aaKnown RBP7.54□□□□□ -1.2
PTM1YKL039W SCW11P53189 542 aa7.54□□□□□ -1.2
PTM1YKL039W CWC15Q03772 175 aaKnown RBP7.54□□□□□ -1.2
PTM1YKL039W CDC19P00549 500 aaKnown RBP7.53□□□□□ -1.2
PTM1YKL039W AHP1P38013 176 aaKnown RBP7.53□□□□□ -1.2
PTM1YKL039W TPS3P38426 1054 aaKnown RBP7.53□□□□□ -1.2
PTM1YKL039W RPL34AP87262 121 aaPredicted RBP7.53□□□□□ -1.2
PTM1YKL039W YNL165WP53891 406 aa7.51□□□□□ -1.21
PTM1YKL039W GAR1P28007 205 aaKnown RBP7.5□□□□□ -1.21
PTM1YKL039W HXT5P38695 592 aa7.5□□□□□ -1.21
PTM1YKL039W OSH7P38755 437 aa7.5□□□□□ -1.21
PTM1YKL039W ALD4P46367 519 aaKnown RBP7.5□□□□□ -1.21
PTM1YKL039W CWH41P53008 833 aa7.5□□□□□ -1.21
PTM1YKL039W CAB1Q04430 367 aa7.5□□□□□ -1.21
PTM1YKL039W PUN1Q06991 263 aa7.5□□□□□ -1.21
PTM1YKL039W RPS31P05759 152 aaKnown RBP7.49□□□□□ -1.21
PTM1YKL039W SRS2P12954 1174 aa7.49□□□□□ -1.21
PTM1YKL039W IRE1P32361 1115 aa7.49□□□□□ -1.21
PTM1YKL039W UBP15P50101 1230 aa7.49□□□□□ -1.21
PTM1YKL039W ACO2P39533 789 aa7.48□□□□□ -1.21
PTM1YKL039W MLF3P32047 452 aa7.47□□□□□ -1.21
PTM1YKL039W NAM8Q00539 523 aaKnown RBP7.47□□□□□ -1.21
PTM1YKL039W PSH1Q12161 406 aa7.47□□□□□ -1.21
PTM1YKL039W PDC6P26263 563 aaKnown RBP7.46□□□□□ -1.21
PTM1YKL039W SCD5P34758 872 aa7.46□□□□□ -1.21
PTM1YKL039W PNP1Q05788 311 aa7.46□□□□□ -1.21
PTM1YKL039W YDL176WQ12027 708 aa7.46□□□□□ -1.21
PTM1YKL039W YIR007WP40566 764 aa7.46□□□□□ -1.22
PTM1YKL039W ROG3P43602 733 aa7.46□□□□□ -1.22
PTM1YKL039W CAF120P53836 1060 aa7.46□□□□□ -1.22
PTM1YKL039W Q0182Q9ZZW1 134 aa7.46□□□□□ -1.22
PTM1YKL039W FOX2Q02207 900 aaKnown RBP7.45□□□□□ -1.22
PTM1YKL039W TY1A-MR1Q04215 440 aa7.45□□□□□ -1.22
PTM1YKL039W UTP4Q06679 776 aaKnown RBP7.45□□□□□ -1.22
PTM1YKL039W CDC3P32457 520 aaKnown RBP7.44□□□□□ -1.22
PTM1YKL039W YBR197CP38306 217 aa7.44□□□□□ -1.22
PTM1YKL039W CCP1P00431 361 aa7.42□□□□□ -1.22
PTM1YKL039W LEU1P07264 779 aaKnown RBP7.42□□□□□ -1.22
PTM1YKL039W ISC10P32645 267 aa7.42□□□□□ -1.22
PTM1YKL039W BOL3P39724 118 aa7.42□□□□□ -1.22
PTM1YKL039W YTA6P40328 754 aa7.42□□□□□ -1.22
PTM1YKL039W ALD2P47771 506 aa7.42□□□□□ -1.22
PTM1YKL039W MRPL33P20084 86 aa7.41□□□□□ -1.22
PTM1YKL039W GBP2P25555 427 aaKnown RBP RIP-Chip data7.41□□□□□ -1.22not detected
PTM1YKL039W RGA1P39083 1007 aa7.4□□□□□ -1.22
PTM1YKL039W BOI1P38041 980 aaKnown RBP7.39□□□□□ -1.23
PTM1YKL039W KAR5Q04746 504 aa7.38□□□□□ -1.23
PTM1YKL039W CUZ1P53899 274 aa7.37□□□□□ -1.23
PTM1YKL039W FUR4P05316 633 aaKnown RBP7.37□□□□□ -1.23
PTM1YKL039W RRN6P32786 894 aa7.37□□□□□ -1.23
PTM1YKL039W LSO1Q3E827 93 aa7.37□□□□□ -1.23
PTM1YKL039W VMA3P25515 160 aa7.36□□□□□ -1.23
PTM1YKL039W QDR2P40474 542 aa7.36□□□□□ -1.23
PTM1YKL039W MTO1P53070 669 aa7.36□□□□□ -1.23
PTM1YKL039W RGP1P16664 663 aa7.35□□□□□ -1.23
PTM1YKL039W DIT1P21623 536 aa7.35□□□□□ -1.23
PTM1YKL039W KAP122P32767 1081 aa7.35□□□□□ -1.23
PTM1YKL039W APC11Q12157 165 aa7.35□□□□□ -1.23
PTM1YKL039W HAT1Q12341 374 aa7.35□□□□□ -1.23
PTM1YKL039W STB3Q12427 513 aa7.35□□□□□ -1.23
PTM1YKL039W KTR2P33550 425 aa7.34□□□□□ -1.23
PTM1YKL039W MRPL16P38064 232 aa7.34□□□□□ -1.23
PTM1YKL039W YMR265CQ03508 461 aaKnown RBP7.34□□□□□ -1.23
PTM1YKL039W RPC31P17890 251 aa7.33□□□□□ -1.24
PTM1YKL039W ATG1P53104 897 aa7.33□□□□□ -1.24
PTM1YKL039W RPB10P22139 70 aa7.33□□□□□ -1.24
PTM1YKL039W YPL062WQ02781 134 aa7.33□□□□□ -1.24
PTM1YKL039W SPR3P41901 512 aa7.32□□□□□ -1.24
PTM1YKL039W SKP1P52286 194 aa7.32□□□□□ -1.24
PTM1YKL039W GLO3P38682 493 aaKnown RBP7.31□□□□□ -1.24
PTM1YKL039W SSF1P38789 453 aaPredicted RBP7.31□□□□□ -1.24
Retrieved 100 of 5,963 RNA–protein pairs in 44.9 ms