RNA–Protein interactions for RNA: YJL047C

RTT101, Transcript of Cullin subunit of a Roc1p-dependent E3 ubiquitin ligase complex, yeastyeast

Gene RTT101, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT101YJL047C NUP82P40368 713 aa2.57□□□□□ -2
RTT101YJL047C HUL5P53119 910 aa2.57□□□□□ -2
RTT101YJL047C NAF1P53919 492 aaKnown RBP2.57□□□□□ -2
RTT101YJL047C ESF1Q06344 628 aaKnown RBP2.57□□□□□ -2
RTT101YJL047C PUN1Q06991 263 aa2.57□□□□□ -2
RTT101YJL047C AI4P03878 556 aa2.57□□□□□ -2
RTT101YJL047C MET6P05694 767 aaKnown RBP2.57□□□□□ -2
RTT101YJL047C PHO4P07270 312 aaKnown RBP2.57□□□□□ -2
RTT101YJL047C MPH3P0CE00 602 aa2.57□□□□□ -2
RTT101YJL047C TRM1P15565 570 aaKnown RBP2.57□□□□□ -2
RTT101YJL047C PTC4P38089 393 aa2.57□□□□□ -2
RTT101YJL047C RPS26AP39938 119 aaKnown RBP2.57□□□□□ -2
RTT101YJL047C RPS26BP39939 119 aaKnown RBP2.57□□□□□ -2
RTT101YJL047C GIR2Q03768 265 aaPredicted RBP2.57□□□□□ -2
RTT101YJL047C ENV9Q08651 330 aa2.57□□□□□ -2
RTT101YJL047C HTA1P04911 132 aaKnown RBP2.56□□□□□ -2
RTT101YJL047C HTA2P04912 132 aa2.56□□□□□ -2
RTT101YJL047C RAD2P07276 1031 aa2.56□□□□□ -2
RTT101YJL047C KAR1P11927 433 aa2.56□□□□□ -2
RTT101YJL047C SRS2P12954 1174 aa2.56□□□□□ -2
RTT101YJL047C SEC61P32915 480 aa2.56□□□□□ -2
RTT101YJL047C YGL081WP53156 320 aa2.56□□□□□ -2
RTT101YJL047C TMA64Q04600 565 aaKnown RBP2.56□□□□□ -2
RTT101YJL047C YOR131CQ12486 218 aa2.56□□□□□ -2
RTT101YJL047C TRX2P22803 104 aaKnown RBP2.56□□□□□ -2
RTT101YJL047C SUV3P32580 737 aa2.56□□□□□ -2
RTT101YJL047C PEP7P32609 515 aa2.56□□□□□ -2
RTT101YJL047C EAP1P36041 632 aaKnown RBP2.56□□□□□ -2
RTT101YJL047C MSH4P40965 878 aaPredicted RBP2.56□□□□□ -2
RTT101YJL047C DAK2P43550 591 aa2.56□□□□□ -2
RTT101YJL047C FOL1P53848 824 aa2.56□□□□□ -2
RTT101YJL047C TOS4Q06266 489 aa2.56□□□□□ -2
RTT101YJL047C THS1P04801 734 aaKnown RBP2.55□□□□□ -2
RTT101YJL047C CHL1P22516 861 aaPredicted RBP2.55□□□□□ -2
RTT101YJL047C GRX1P25373 110 aaKnown RBP2.55□□□□□ -2
RTT101YJL047C RAD27P26793 382 aa2.55□□□□□ -2
RTT101YJL047C VPS24P36095 224 aaKnown RBP2.55□□□□□ -2
RTT101YJL047C SLI15P38283 698 aa2.55□□□□□ -2
RTT101YJL047C NOP2P40991 618 aaKnown RBP2.55□□□□□ -2
RTT101YJL047C MID1P41821 548 aa2.55□□□□□ -2
RTT101YJL047C ITC1P53125 1264 aa2.55□□□□□ -2
RTT101YJL047C COG4Q06096 861 aa2.55□□□□□ -2
RTT101YJL047C CSC1Q06538 782 aa2.55□□□□□ -2
RTT101YJL047C HAP4P14064 554 aa2.54□□□□□ -2
RTT101YJL047C CLN2P20438 545 aa2.54□□□□□ -2
RTT101YJL047C SRM1P21827 482 aa2.54□□□□□ -2
RTT101YJL047C CRP1P38845 465 aaKnown RBP2.54□□□□□ -2
RTT101YJL047C PEX8P53248 589 aa2.54□□□□□ -2
RTT101YJL047C YNL035CP53962 389 aaKnown RBP2.54□□□□□ -2
RTT101YJL047C FOX2Q02207 900 aaKnown RBP2.54□□□□□ -2
RTT101YJL047C TRS120Q04183 1289 aa2.54□□□□□ -2
RTT101YJL047C NKP1Q12493 238 aa2.54□□□□□ -2
RTT101YJL047C LSO1Q3E827 93 aa2.54□□□□□ -2
RTT101YJL047C RAD4P14736 754 aa2.54□□□□□ -2
RTT101YJL047C CDC11P32458 415 aa2.54□□□□□ -2
RTT101YJL047C TOA1P32773 286 aa2.54□□□□□ -2
RTT101YJL047C RTT106P40161 455 aa2.54□□□□□ -2
RTT101YJL047C YFR016CP43597 1233 aaKnown RBP2.54□□□□□ -2
RTT101YJL047C CWC24P53769 259 aa2.54□□□□□ -2
RTT101YJL047C CDC73Q06697 393 aa2.54□□□□□ -2
RTT101YJL047C ERR1P0CX10 437 aa2.53□□□□□ -2
RTT101YJL047C ERR2P0CX11 437 aa2.53□□□□□ -2
RTT101YJL047C PHO8P11491 566 aa2.53□□□□□ -2
RTT101YJL047C PRI2P20457 528 aa2.53□□□□□ -2
RTT101YJL047C RPB10P22139 70 aa2.53□□□□□ -2
RTT101YJL047C PWP2P25635 923 aaKnown RBP2.53□□□□□ -2
RTT101YJL047C PET112P33893 541 aa2.53□□□□□ -2
RTT101YJL047C SOH1P38633 127 aa2.53□□□□□ -2
RTT101YJL047C YHR020WP38708 688 aaKnown RBP2.53□□□□□ -2
RTT101YJL047C POL5P39985 1022 aaKnown RBP2.53□□□□□ -2
RTT101YJL047C TUB4P53378 473 aa2.53□□□□□ -2
RTT101YJL047C RMD1Q03441 430 aa2.53□□□□□ -2
RTT101YJL047C YOR378WQ08902 515 aa2.53□□□□□ -2
RTT101YJL047C CYC8P14922 966 aa2.53□□□□□ -2
RTT101YJL047C PDI1P17967 522 aaKnown RBP2.53□□□□□ -2
RTT101YJL047C XDJ1P39102 459 aa2.53□□□□□ -2
RTT101YJL047C APL6P46682 809 aa2.53□□□□□ -2
RTT101YJL047C TIM54P47045 478 aa2.53□□□□□ -2
RTT101YJL047C FAA4P47912 694 aaKnown RBP2.53□□□□□ -2
RTT101YJL047C YNL115CP53925 644 aa2.53□□□□□ -2
RTT101YJL047C JIP4Q03361 876 aa2.53□□□□□ -2
RTT101YJL047C ERF2Q06551 359 aa2.53□□□□□ -2
RTT101YJL047C YPR084WQ06821 456 aa2.53□□□□□ -2
RTT101YJL047C GAS4Q08271 471 aa2.53□□□□□ -2
RTT101YJL047C HIF1Q12373 385 aa2.53□□□□□ -2
RTT101YJL047C PIF1P07271 859 aa2.52□□□□□ -2.01
RTT101YJL047C MNN4P36044 1178 aa2.52□□□□□ -2.01
RTT101YJL047C YKL069WP36088 180 aa2.52□□□□□ -2.01
RTT101YJL047C PAF1P38351 445 aa2.52□□□□□ -2.01
RTT101YJL047C SAP30P38429 201 aa2.52□□□□□ -2.01
RTT101YJL047C VPS27P40343 622 aaKnown RBP2.52□□□□□ -2.01
RTT101YJL047C BUB1P41695 1021 aaKnown RBP RIP-Chip data2.52□□□□□ -2.01not detected
RTT101YJL047C YNR029CP53729 429 aaKnown RBP2.52□□□□□ -2.01
RTT101YJL047C SRC1Q03707 834 aa2.52□□□□□ -2.01
RTT101YJL047C ENT2Q05785 613 aa2.52□□□□□ -2.01
RTT101YJL047C TUM1Q08686 304 aaKnown RBP2.52□□□□□ -2.01
RTT101YJL047C ADR1P07248 1323 aa2.52□□□□□ -2.01
RTT101YJL047C NFU1P32860 256 aa2.52□□□□□ -2.01
RTT101YJL047C KTR2P33550 425 aa2.52□□□□□ -2.01
RTT101YJL047C NOC2P39744 710 aaKnown RBP2.52□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms