RNA–Protein interactions for RNA: YIL017C

VID28, Transcript of GID Complex subunit, serves as adaptor for regulatory subunit Vid24p, yeast

Gene VID28, Length 2,766 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VID28	YIL017C	RPN12	P32496	274 aa		4.76	□□□□□ -1.65
VID28	YIL017C	NUP192	P47054	1683 aa		4.76	□□□□□ -1.65
VID28	YIL017C	RAD51	P25454	400 aa		4.76	□□□□□ -1.65
VID28	YIL017C	MRC1	P25588	1096 aa		4.76	□□□□□ -1.65
VID28	YIL017C	MCM2	P29469	868 aa		4.76	□□□□□ -1.65
VID28	YIL017C	YIL092W	P40497	633 aa		4.76	□□□□□ -1.65
VID28	YIL017C	PXR1	P53335	271 aa	Predicted RBP	4.76	□□□□□ -1.65
VID28	YIL017C	ERV41	Q04651	352 aa		4.76	□□□□□ -1.65
VID28	YIL017C	PKC1	P24583	1151 aa		4.75	□□□□□ -1.65
VID28	YIL017C	CLB5	P30283	435 aa		4.75	□□□□□ -1.65
VID28	YIL017C	HGH1	P48362	394 aa	Known RBP	4.75	□□□□□ -1.65
VID28	YIL017C	PIB1	Q06651	286 aa		4.75	□□□□□ -1.65
VID28	YIL017C	VMR1	P38735	1592 aa		4.75	□□□□□ -1.65
VID28	YIL017C	GUT1	P32190	709 aa		4.75	□□□□□ -1.65
VID28	YIL017C	PCS60	P38137	543 aa	Known RBP RIP-Chip data	4.75	□□□□□ -1.65	RIP-Chip
VID28	YIL017C	POL32	P47110	350 aa		4.75	□□□□□ -1.65
VID28	YIL017C	LYS2	P07702	1392 aa		4.75	□□□□□ -1.65
VID28	YIL017C	NUP145	P49687	1317 aa		4.74	□□□□□ -1.65
VID28	YIL017C	RTT107	P38850	1070 aa		4.74	□□□□□ -1.65
VID28	YIL017C	YGR273C	P53329	174 aa		4.74	□□□□□ -1.65
VID28	YIL017C	ETT1	Q08421	412 aa	Known RBP	4.74	□□□□□ -1.65
VID28	YIL017C	YAP5	P40574	245 aa		4.74	□□□□□ -1.65
VID28	YIL017C	SAM3	Q08986	587 aa		4.74	□□□□□ -1.65
VID28	YIL017C	USO1	P25386	1790 aa		4.74	□□□□□ -1.65
VID28	YIL017C	PSE1	P32337	1089 aa	Known RBP	4.73	□□□□□ -1.65
VID28	YIL017C	ZUO1	P32527	433 aa	Known RBP	4.73	□□□□□ -1.65
VID28	YIL017C	ESL2	P36168	1195 aa		4.73	□□□□□ -1.65
VID28	YIL017C	SFI1	Q12369	946 aa		4.73	□□□□□ -1.65
VID28	YIL017C	MIC60	P36112	540 aa		4.73	□□□□□ -1.65
VID28	YIL017C	PUF6	Q04373	656 aa	Known RBP	4.73	□□□□□ -1.65
VID28	YIL017C	CYC8	P14922	966 aa		4.72	□□□□□ -1.65
VID28	YIL017C	STE11	P23561	717 aa		4.72	□□□□□ -1.65
VID28	YIL017C	GLN1	P32288	370 aa	Known RBP	4.72	□□□□□ -1.65
VID28	YIL017C	RSM25	P40496	264 aa		4.72	□□□□□ -1.65
VID28	YIL017C	MVP1	P40959	511 aa	Known RBP	4.72	□□□□□ -1.65
VID28	YIL017C	DRS2	P39524	1355 aa		4.72	□□□□□ -1.65
VID28	YIL017C	KTR1	P27810	393 aa	Known RBP	4.72	□□□□□ -1.65
VID28	YIL017C	ELM1	P32801	640 aa		4.72	□□□□□ -1.65
VID28	YIL017C	SWH1	P35845	1188 aa		4.72	□□□□□ -1.65
VID28	YIL017C	RPN7	Q06103	429 aa	Known RBP	4.72	□□□□□ -1.65
VID28	YIL017C	GRE2	Q12068	342 aa	Known RBP	4.72	□□□□□ -1.65
VID28	YIL017C	RAD50	P12753	1312 aa		4.72	□□□□□ -1.65
VID28	YIL017C	ARD1	P07347	238 aa	Predicted RBP	4.71	□□□□□ -1.65
VID28	YIL017C	KAR3	P17119	729 aa		4.71	□□□□□ -1.65
VID28	YIL017C	RVS167	P39743	482 aa	Known RBP	4.71	□□□□□ -1.65
VID28	YIL017C	FKH1	P40466	484 aa		4.71	□□□□□ -1.65
VID28	YIL017C	ATH1	P48016	1211 aa		4.71	□□□□□ -1.66
VID28	YIL017C	ORC6	P38826	435 aa		4.7	□□□□□ -1.66
VID28	YIL017C	YGL140C	P53120	1219 aa		4.7	□□□□□ -1.66
VID28	YIL017C	ORM2	Q06144	216 aa		4.7	□□□□□ -1.66
VID28	YIL017C	PUS1	Q12211	544 aa	Known RBP	4.7	□□□□□ -1.66
VID28	YIL017C	YEF3	P16521	1044 aa	Known RBP	4.7	□□□□□ -1.66
VID28	YIL017C	VPS41	P38959	992 aa		4.7	□□□□□ -1.66
VID28	YIL017C	CSN12	P47130	423 aa		4.7	□□□□□ -1.66
VID28	YIL017C	YMR102C	Q03177	834 aa		4.7	□□□□□ -1.66
VID28	YIL017C	YSH1	Q06224	779 aa	Predicted RBP	4.7	□□□□□ -1.66
VID28	YIL017C	BUD21	Q08492	214 aa	Predicted RBP	4.7	□□□□□ -1.66
VID28	YIL017C	MST1	P07236	462 aa		4.7	□□□□□ -1.66
VID28	YIL017C	PET123	P17558	318 aa		4.7	□□□□□ -1.66
VID28	YIL017C	NDC80	P40460	691 aa		4.7	□□□□□ -1.66
VID28	YIL017C	SAP155	P43612	1002 aa		4.7	□□□□□ -1.66
VID28	YIL017C	HRQ1	Q05549	1077 aa		4.7	□□□□□ -1.66
VID28	YIL017C	UTP13	Q05946	817 aa	Known RBP	4.7	□□□□□ -1.66
VID28	YIL017C	ABP140	Q08641	628 aa	Known RBP	4.7	□□□□□ -1.66
VID28	YIL017C	APL5	Q08951	932 aa	Known RBP	4.7	□□□□□ -1.66
VID28	YIL017C	DUR1,2	P32528	1835 aa	Known RBP	4.69	□□□□□ -1.66
VID28	YIL017C	VPS8	P39702	1274 aa		4.69	□□□□□ -1.66
VID28	YIL017C	IAH1	P41734	238 aa		4.69	□□□□□ -1.66
VID28	YIL017C	HEF3	P53978	1044 aa	Known RBP	4.69	□□□□□ -1.66
VID28	YIL017C	PSK1	P31374	1356 aa		4.69	□□□□□ -1.66
VID28	YIL017C	BUD3	P25558	1636 aa		4.69	□□□□□ -1.66
VID28	YIL017C	NUP188	P52593	1655 aa	Known RBP	4.69	□□□□□ -1.66
VID28	YIL017C	SUB2	Q07478	446 aa	Known RBP	4.69	□□□□□ -1.66
VID28	YIL017C	SSA2	P10592	639 aa	Known RBP	4.68	□□□□□ -1.66
VID28	YIL017C	RPS0A	P32905	252 aa	Known RBP	4.68	□□□□□ -1.66
VID28	YIL017C	YMR124W	P39523	943 aa	Known RBP	4.68	□□□□□ -1.66
VID28	YIL017C	ALD3	P54114	506 aa		4.68	□□□□□ -1.66
VID28	YIL017C	MDM38	Q08179	573 aa		4.68	□□□□□ -1.66
VID28	YIL017C	PSH1	Q12161	406 aa		4.68	□□□□□ -1.66
VID28	YIL017C	RGR1	P19263	1082 aa		4.68	□□□□□ -1.66
VID28	YIL017C	RAD16	P31244	790 aa		4.68	□□□□□ -1.66
VID28	YIL017C	RAD54	P32863	898 aa		4.68	□□□□□ -1.66
VID28	YIL017C	BIM1	P40013	344 aa		4.68	□□□□□ -1.66
VID28	YIL017C	MDG1	P53885	366 aa		4.68	□□□□□ -1.66
VID28	YIL017C	GCR2	Q01722	534 aa		4.68	□□□□□ -1.66
VID28	YIL017C	APC1	P53886	1748 aa		4.68	□□□□□ -1.66
VID28	YIL017C	GAP1	P19145	602 aa	Predicted RBP	4.67	□□□□□ -1.66
VID28	YIL017C	MRPL10	P36520	322 aa		4.67	□□□□□ -1.66
VID28	YIL017C	BRL1	P38770	471 aa		4.67	□□□□□ -1.66
VID28	YIL017C	ATG32	P40458	529 aa		4.67	□□□□□ -1.66
VID28	YIL017C	MPP10	P47083	593 aa	Known RBP	4.67	□□□□□ -1.66
VID28	YIL017C	INP2	Q03824	705 aa		4.67	□□□□□ -1.66
VID28	YIL017C	RRP1	P35178	278 aa	Predicted RBP	4.67	□□□□□ -1.66
VID28	YIL017C	STE20	Q03497	939 aa	Known RBP	4.67	□□□□□ -1.66
VID28	YIL017C	HSP104	P31539	908 aa	Known RBP	4.66	□□□□□ -1.66
VID28	YIL017C	VID30	P53076	958 aa		4.66	□□□□□ -1.66
VID28	YIL017C	RNR2	P09938	399 aa	Known RBP	4.66	□□□□□ -1.66
VID28	YIL017C	TRK1	P12685	1235 aa		4.66	□□□□□ -1.66
VID28	YIL017C	SPT5	P27692	1063 aa	Known RBP	4.66	□□□□□ -1.66
VID28	YIL017C	ILV3	P39522	585 aa	Known RBP	4.66	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms