RNA–Protein interactions for RNA: YIL013C

PDR11, Transcript of ATP-binding cassette (ABC) transporter, yeastyeast

Gene PDR11, Length 4,236 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDR11YIL013C JJJ2P46997 583 aa2.9□□□□□ -1.95
PDR11YIL013C DCD1P06773 312 aa2.9□□□□□ -1.95
PDR11YIL013C DPH6Q12429 685 aa2.9□□□□□ -1.95
PDR11YIL013C KRI1P42846 591 aaKnown RBP2.89□□□□□ -1.95
PDR11YIL013C COQ4O13525 335 aa2.89□□□□□ -1.95
PDR11YIL013C LYS2P07702 1392 aa2.89□□□□□ -1.95
PDR11YIL013C RTT109Q07794 436 aa2.89□□□□□ -1.95
PDR11YIL013C NYV1Q12255 253 aa2.89□□□□□ -1.95
PDR11YIL013C AUS1Q08409 1394 aa2.89□□□□□ -1.95
PDR11YIL013C NUG1P40010 520 aaKnown RBP2.88□□□□□ -1.95
PDR11YIL013C SYF1Q04048 859 aaPredicted RBP2.88□□□□□ -1.95
PDR11YIL013C PIF1P07271 859 aa2.88□□□□□ -1.95
PDR11YIL013C FRD1P32614 470 aaKnown RBP2.88□□□□□ -1.95
PDR11YIL013C SRT1Q03175 343 aa2.88□□□□□ -1.95
PDR11YIL013C PUF6Q04373 656 aaKnown RBP2.88□□□□□ -1.95
PDR11YIL013C PEX21P50091 288 aa2.88□□□□□ -1.95
PDR11YIL013C YLR271WQ06152 274 aa2.88□□□□□ -1.95
PDR11YIL013C RRG1Q12167 365 aaPredicted RBP2.88□□□□□ -1.95
PDR11YIL013C SSK22P25390 1331 aaPredicted RBP2.88□□□□□ -1.95
PDR11YIL013C NGR1P32831 672 aaKnown RBP2.88□□□□□ -1.95
PDR11YIL013C FUN12P39730 1002 aaKnown RBP2.88□□□□□ -1.95
PDR11YIL013C ERO1Q03103 563 aa2.88□□□□□ -1.95
PDR11YIL013C THI22Q06490 572 aa2.88□□□□□ -1.95
PDR11YIL013C SIT4P20604 311 aa2.87□□□□□ -1.95
PDR11YIL013C APL2P36000 726 aaPredicted RBP2.87□□□□□ -1.95
PDR11YIL013C FPK1P53739 893 aa2.87□□□□□ -1.95
PDR11YIL013C RVB2Q12464 471 aaKnown RBP2.87□□□□□ -1.95
PDR11YIL013C PIP2P52960 996 aa2.87□□□□□ -1.95
PDR11YIL013C TIM50Q02776 476 aa2.87□□□□□ -1.95
PDR11YIL013C AAD16Q02895 342 aa2.87□□□□□ -1.95
PDR11YIL013C PDR18P53756 1333 aa2.87□□□□□ -1.95
PDR11YIL013C GAL2P13181 574 aa2.87□□□□□ -1.95
PDR11YIL013C PBY1P38254 753 aa2.87□□□□□ -1.95
PDR11YIL013C SUI2P20459 304 aaKnown RBP2.86□□□□□ -1.95
PDR11YIL013C SLN1P39928 1220 aaPredicted RBP2.86□□□□□ -1.95
PDR11YIL013C EAF6P47128 113 aa2.86□□□□□ -1.95
PDR11YIL013C MLC1P53141 149 aa2.86□□□□□ -1.95
PDR11YIL013C MTC5Q03897 1148 aa2.86□□□□□ -1.95
PDR11YIL013C URB1P34241 1764 aaKnown RBP2.86□□□□□ -1.95
PDR11YIL013C ICL1P28240 557 aaPredicted RBP2.86□□□□□ -1.95
PDR11YIL013C SEC20P28791 383 aa2.86□□□□□ -1.95
PDR11YIL013C MDL2P33311 773 aa2.86□□□□□ -1.95
PDR11YIL013C SHC1P39000 512 aa2.86□□□□□ -1.95
PDR11YIL013C MRD1Q06106 887 aaKnown RBP2.86□□□□□ -1.95
PDR11YIL013C FKS3Q04952 1785 aa2.86□□□□□ -1.95
PDR11YIL013C RFC1P38630 861 aaKnown RBP2.86□□□□□ -1.95
PDR11YIL013C STM1P39015 273 aaKnown RBP2.86□□□□□ -1.95
PDR11YIL013C HUL5P53119 910 aa2.86□□□□□ -1.95
PDR11YIL013C SPO1P53541 631 aa2.86□□□□□ -1.95
PDR11YIL013C TRM44Q02648 567 aaKnown RBP2.86□□□□□ -1.95
PDR11YIL013C FPR4Q06205 392 aaPredicted RBP2.86□□□□□ -1.95
PDR11YIL013C ACK1Q07622 623 aaPredicted RBP2.86□□□□□ -1.95
PDR11YIL013C THS1P04801 734 aaKnown RBP2.85□□□□□ -1.95
PDR11YIL013C RSC30P38781 883 aa2.85□□□□□ -1.95
PDR11YIL013C ITC1P53125 1264 aa2.85□□□□□ -1.95
PDR11YIL013C YAF9P53930 226 aa2.85□□□□□ -1.95
PDR11YIL013C NAB6Q03735 1134 aaKnown RBP RIP-Chip data2.85□□□□□ -1.95not detected
PDR11YIL013C TUM1Q08686 304 aaKnown RBP2.85□□□□□ -1.95
PDR11YIL013C ERT1P38140 529 aa2.85□□□□□ -1.95
PDR11YIL013C TOS1P38288 455 aa2.85□□□□□ -1.95
PDR11YIL013C GSM1P42950 618 aa2.85□□□□□ -1.95
PDR11YIL013C CTH1P47976 325 aa2.85□□□□□ -1.95
PDR11YIL013C CSI1Q04368 295 aa2.85□□□□□ -1.95
PDR11YIL013C SVF1Q05515 481 aa2.85□□□□□ -1.95
PDR11YIL013C CWC15Q03772 175 aaKnown RBP2.85□□□□□ -1.95
PDR11YIL013C TRP5P00931 707 aaKnown RBP2.85□□□□□ -1.95
PDR11YIL013C SMY1P32364 656 aaKnown RBP2.85□□□□□ -1.95
PDR11YIL013C OSH3P38713 996 aaKnown RBP2.85□□□□□ -1.95
PDR11YIL013C UBP12P39538 1254 aa2.85□□□□□ -1.95
PDR11YIL013C ZDS2P54786 942 aa2.85□□□□□ -1.95
PDR11YIL013C ESF1Q06344 628 aaKnown RBP2.85□□□□□ -1.95
PDR11YIL013C SNF2P22082 1703 aa2.84□□□□□ -1.95
PDR11YIL013C VAS1P07806 1104 aaKnown RBP2.84□□□□□ -1.95
PDR11YIL013C PWP2P25635 923 aaKnown RBP2.84□□□□□ -1.95
PDR11YIL013C TPS3P38426 1054 aaKnown RBP2.84□□□□□ -1.95
PDR11YIL013C VHR2P40041 505 aa2.84□□□□□ -1.95
PDR11YIL013C RET1P22276 1149 aaKnown RBP2.84□□□□□ -1.95
PDR11YIL013C RTG2P32608 588 aaKnown RBP2.84□□□□□ -1.95
PDR11YIL013C GEF1P37020 779 aa2.84□□□□□ -1.95
PDR11YIL013C RRP46P53256 223 aaPredicted RBP2.84□□□□□ -1.95
PDR11YIL013C BRE1Q07457 700 aaKnown RBP2.84□□□□□ -1.95
PDR11YIL013C BSD2P38356 321 aa2.84□□□□□ -1.96
PDR11YIL013C RPT4P53549 437 aaKnown RBP2.84□□□□□ -1.96
PDR11YIL013C PRP42Q03776 544 aaKnown RBP2.84□□□□□ -1.96
PDR11YIL013C THI3Q07471 609 aa2.84□□□□□ -1.96
PDR11YIL013C ATG20Q07528 640 aa2.84□□□□□ -1.96
PDR11YIL013C SWC3P31376 625 aa2.83□□□□□ -1.96
PDR11YIL013C RAD24P32641 659 aa2.83□□□□□ -1.96
PDR11YIL013C AFG2P32794 780 aa2.83□□□□□ -1.96
PDR11YIL013C SNU71P53207 620 aaKnown RBP2.83□□□□□ -1.96
PDR11YIL013C ARP5P53946 755 aa2.83□□□□□ -1.96
PDR11YIL013C MGM1P32266 881 aa2.83□□□□□ -1.96
PDR11YIL013C PES4P39684 611 aa2.83□□□□□ -1.96
PDR11YIL013C BOI2P39969 1040 aa2.83□□□□□ -1.96
PDR11YIL013C APL6P46682 809 aa2.83□□□□□ -1.96
PDR11YIL013C TY4B-HP0C2J7 1802 aa2.83□□□□□ -1.96
PDR11YIL013C TY4B-JP47024 1803 aa2.83□□□□□ -1.96
PDR11YIL013C BOI1P38041 980 aaKnown RBP2.83□□□□□ -1.96
PDR11YIL013C ALG2P43636 503 aa2.83□□□□□ -1.96
PDR11YIL013C PUS6P53294 404 aa2.83□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 51.6 ms