RNA–Protein interactions for RNA: YHR056C

RSC30, Transcript of Component of the RSC chromatin remodeling complex, yeast

Gene RSC30, Length 2,652 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSC30	YHR056C	KAR2	P16474	682 aa	Known RBP	7.45	□□□□□ -1.22
RSC30	YHR056C	MOT2	P34909	587 aa	Known RBP	7.45	□□□□□ -1.22
RSC30	YHR056C	UGA3	P26370	528 aa		7.44	□□□□□ -1.22
RSC30	YHR056C	HAT1	Q12341	374 aa		7.44	□□□□□ -1.22
RSC30	YHR056C	LYS2	P07702	1392 aa		7.44	□□□□□ -1.22
RSC30	YHR056C	RTG3	P38165	486 aa		7.44	□□□□□ -1.22
RSC30	YHR056C	AKL1	P38080	1108 aa	Known RBP	7.43	□□□□□ -1.22
RSC30	YHR056C	SAS4	Q04003	481 aa		7.43	□□□□□ -1.22
RSC30	YHR056C	CSR2	Q12734	1121 aa		7.42	□□□□□ -1.22
RSC30	YHR056C	APE3	P37302	537 aa	Known RBP	7.41	□□□□□ -1.22
RSC30	YHR056C	RPN1	P38764	993 aa	Known RBP	7.41	□□□□□ -1.22
RSC30	YHR056C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	7.41	□□□□□ -1.22	not detected
RSC30	YHR056C	PCS60	P38137	543 aa	Known RBP RIP-Chip data	7.41	□□□□□ -1.22	not detected
RSC30	YHR056C	GSC2	P40989	1895 aa		7.4	□□□□□ -1.22
RSC30	YHR056C	YGL082W	P53155	381 aa		7.39	□□□□□ -1.23
RSC30	YHR056C	TRM44	Q02648	567 aa	Known RBP	7.39	□□□□□ -1.23
RSC30	YHR056C	RRG1	Q12167	365 aa	Predicted RBP	7.39	□□□□□ -1.23
RSC30	YHR056C	FRD1	P32614	470 aa	Known RBP	7.38	□□□□□ -1.23
RSC30	YHR056C	NSE3	Q05541	303 aa		7.38	□□□□□ -1.23
RSC30	YHR056C	NTH2	P35172	780 aa		7.38	□□□□□ -1.23
RSC30	YHR056C	MAL31	P38156	614 aa		7.38	□□□□□ -1.23
RSC30	YHR056C	RBA50	Q04418	439 aa		7.38	□□□□□ -1.23
RSC30	YHR056C	ALE1	Q08548	619 aa		7.38	□□□□□ -1.23
RSC30	YHR056C	EAR1	Q03212	550 aa		7.37	□□□□□ -1.23
RSC30	YHR056C	GAP1	P19145	602 aa	Predicted RBP	7.36	□□□□□ -1.23
RSC30	YHR056C	ARG8	P18544	423 aa		7.36	□□□□□ -1.23
RSC30	YHR056C	HPR1	P17629	752 aa	Known RBP	7.35	□□□□□ -1.23
RSC30	YHR056C	ORC1	P54784	914 aa	Predicted RBP	7.35	□□□□□ -1.23
RSC30	YHR056C	CAF20	P12962	161 aa	Known RBP	7.34	□□□□□ -1.23
RSC30	YHR056C	GAL2	P13181	574 aa		7.34	□□□□□ -1.23
RSC30	YHR056C	PAP2	P53632	584 aa	Known RBP	7.32	□□□□□ -1.24
RSC30	YHR056C	YNL050C	P53952	270 aa		7.31	□□□□□ -1.24
RSC30	YHR056C	YLR271W	Q06152	274 aa		7.31	□□□□□ -1.24
RSC30	YHR056C	YPR204W	Q08995	1032 aa		7.31	□□□□□ -1.24
RSC30	YHR056C	AFG2	P32794	780 aa		7.31	□□□□□ -1.24
RSC30	YHR056C	DPH6	Q12429	685 aa		7.31	□□□□□ -1.24
RSC30	YHR056C	DCD1	P06773	312 aa		7.3	□□□□□ -1.24
RSC30	YHR056C	KRE2	P27809	442 aa		7.3	□□□□□ -1.24
RSC30	YHR056C	VPS4	P52917	437 aa		7.3	□□□□□ -1.24
RSC30	YHR056C	PSD2	P53037	1138 aa	Known RBP	7.3	□□□□□ -1.24
RSC30	YHR056C	YVH1	Q02256	364 aa	Known RBP	7.3	□□□□□ -1.24
RSC30	YHR056C	YLR225C	Q05948	407 aa	Known RBP	7.3	□□□□□ -1.24
RSC30	YHR056C	SPR3	P41901	512 aa		7.3	□□□□□ -1.24
RSC30	YHR056C	CLA4	P48562	842 aa		7.3	□□□□□ -1.24
RSC30	YHR056C	AAD16	Q02895	342 aa		7.3	□□□□□ -1.24
RSC30	YHR056C	ADR1	P07248	1323 aa		7.29	□□□□□ -1.24
RSC30	YHR056C	FBP1	P09201	348 aa		7.29	□□□□□ -1.24
RSC30	YHR056C	PSF3	Q12146	194 aa		7.29	□□□□□ -1.24
RSC30	YHR056C	PAM1	P37304	830 aa	Known RBP	7.29	□□□□□ -1.24
RSC30	YHR056C	CBP1	P07252	654 aa		7.28	□□□□□ -1.24
RSC30	YHR056C	WHI3	P34761	661 aa	Known RBP	7.28	□□□□□ -1.24
RSC30	YHR056C	MAM1	P40065	302 aa		7.27	□□□□□ -1.25
RSC30	YHR056C	PDS5	Q04264	1277 aa		7.27	□□□□□ -1.25
RSC30	YHR056C	TRP5	P00931	707 aa	Known RBP	7.27	□□□□□ -1.25
RSC30	YHR056C	SEN54	Q02825	467 aa	Predicted RBP	7.27	□□□□□ -1.25
RSC30	YHR056C	STV1	P37296	890 aa		7.26	□□□□□ -1.25
RSC30	YHR056C	ICP55	P40051	511 aa		7.26	□□□□□ -1.25
RSC30	YHR056C	ACK1	Q07622	623 aa	Predicted RBP	7.26	□□□□□ -1.25
RSC30	YHR056C	PAH1	P32567	862 aa		7.26	□□□□□ -1.25
RSC30	YHR056C	SET4	P42948	560 aa		7.26	□□□□□ -1.25
RSC30	YHR056C	PRP42	Q03776	544 aa	Known RBP	7.26	□□□□□ -1.25
RSC30	YHR056C	SAC3	P46674	1301 aa		7.26	□□□□□ -1.25
RSC30	YHR056C	PNT1	P38969	423 aa		7.25	□□□□□ -1.25
RSC30	YHR056C	IOC4	Q04213	475 aa		7.25	□□□□□ -1.25
RSC30	YHR056C	YFL040W	P43562	540 aa		7.25	□□□□□ -1.25
RSC30	YHR056C	JIP4	Q03361	876 aa		7.25	□□□□□ -1.25
RSC30	YHR056C	ASH1	P34233	588 aa		7.24	□□□□□ -1.25
RSC30	YHR056C	NIT1	P40447	199 aa		7.24	□□□□□ -1.25
RSC30	YHR056C	SGD1	Q06132	899 aa		7.24	□□□□□ -1.25
RSC30	YHR056C	UTP7	P40055	554 aa	Known RBP	7.24	□□□□□ -1.25
RSC30	YHR056C	GAS5	Q08193	484 aa		7.24	□□□□□ -1.25
RSC30	YHR056C	DLD1	P32891	587 aa		7.24	□□□□□ -1.25
RSC30	YHR056C	APL2	P36000	726 aa	Predicted RBP	7.24	□□□□□ -1.25
RSC30	YHR056C	YJR008W	P47085	338 aa		7.24	□□□□□ -1.25
RSC30	YHR056C	YJL171C	P46992	396 aa		7.22	□□□□□ -1.25
RSC30	YHR056C	DNM1	P54861	757 aa		7.22	□□□□□ -1.25
RSC30	YHR056C	TY3A-G	Q12173	290 aa		7.22	□□□□□ -1.25
RSC30	YHR056C	TY3A-I	Q99219	290 aa		7.22	□□□□□ -1.25
RSC30	YHR056C	FMP30	Q02883	468 aa		7.21	□□□□□ -1.25
RSC30	YHR056C	NET1	P47035	1189 aa		7.21	□□□□□ -1.26
RSC30	YHR056C	ULP1	Q02724	621 aa		7.21	□□□□□ -1.26
RSC30	YHR056C	ECM30	Q06673	1274 aa		7.21	□□□□□ -1.26
RSC30	YHR056C	NUG1	P40010	520 aa	Known RBP	7.2	□□□□□ -1.26
RSC30	YHR056C	ZDS1	P50111	915 aa	Known RBP	7.2	□□□□□ -1.26
RSC30	YHR056C	MTC3	P53077	123 aa		7.2	□□□□□ -1.26
RSC30	YHR056C	ERG7	P38604	731 aa		7.2	□□□□□ -1.26
RSC30	YHR056C	PSF2	P40359	213 aa		7.2	□□□□□ -1.26
RSC30	YHR056C	VPS64	Q03944	604 aa		7.2	□□□□□ -1.26
RSC30	YHR056C	YOL057W	Q08225	711 aa		7.2	□□□□□ -1.26
RSC30	YHR056C	GIN4	Q12263	1142 aa		7.2	□□□□□ -1.26
RSC30	YHR056C	ARG82	P07250	355 aa		7.19	□□□□□ -1.26
RSC30	YHR056C	LDH1	P38139	375 aa		7.19	□□□□□ -1.26
RSC30	YHR056C	AIM21	P40563	679 aa		7.19	□□□□□ -1.26
RSC30	YHR056C	RPT4	P53549	437 aa	Known RBP	7.19	□□□□□ -1.26
RSC30	YHR056C	PKH1	Q03407	766 aa		7.19	□□□□□ -1.26
RSC30	YHR056C	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	7.19	□□□□□ -1.26	not detected
RSC30	YHR056C	FLO11	P08640	1367 aa		7.19	□□□□□ -1.26
RSC30	YHR056C	SET1	P38827	1080 aa	Known RBP	7.18	□□□□□ -1.26
RSC30	YHR056C	CST6	P40535	587 aa		7.18	□□□□□ -1.26
RSC30	YHR056C	FLO1	P32768	1537 aa		7.18	□□□□□ -1.26

Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms