RNA–Protein interactions for RNA: YGL213C

SKI8, Transcript of Ski complex component and WD-repeat protein, yeast

Gene SKI8, Length 1,194 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKI8	YGL213C	RPS6A	P0CX37	236 aa	Known RBP	7.51	□□□□□ -1.21
SKI8	YGL213C	RPS6B	P0CX38	236 aa	Predicted RBP	7.51	□□□□□ -1.21
SKI8	YGL213C	ATE1	P16639	503 aa		7.51	□□□□□ -1.21
SKI8	YGL213C	NUT2	Q06213	157 aa		7.51	□□□□□ -1.21
SKI8	YGL213C	UBP1	P25037	809 aa		7.5	□□□□□ -1.21
SKI8	YGL213C	MRF1	P30775	413 aa	Predicted RBP	7.5	□□□□□ -1.21
SKI8	YGL213C	VRP1	P37370	817 aa		7.5	□□□□□ -1.21
SKI8	YGL213C	RRP15	Q06511	250 aa	Predicted RBP	7.5	□□□□□ -1.21
SKI8	YGL213C	SWI5	P08153	709 aa		7.49	□□□□□ -1.21
SKI8	YGL213C	SUV3	P32580	737 aa		7.49	□□□□□ -1.21
SKI8	YGL213C	UTR2	P32623	467 aa		7.49	□□□□□ -1.21
SKI8	YGL213C	MGE1	P38523	228 aa		7.49	□□□□□ -1.21
SKI8	YGL213C	EMW1	P42842	904 aa	Known RBP	7.49	□□□□□ -1.21
SKI8	YGL213C	SYH1	Q02875	849 aa	Known RBP	7.49	□□□□□ -1.21
SKI8	YGL213C	DAT1	P13483	248 aa	Known RBP	7.48	□□□□□ -1.21
SKI8	YGL213C	ISU1	Q03020	165 aa		7.48	□□□□□ -1.21
SKI8	YGL213C	PUS5	Q06244	254 aa		7.48	□□□□□ -1.21
SKI8	YGL213C	LSO1	Q3E827	93 aa		7.48	□□□□□ -1.21
SKI8	YGL213C	FRT1	Q99332	602 aa		7.48	□□□□□ -1.21
SKI8	YGL213C	NGR1	P32831	672 aa	Known RBP	7.47	□□□□□ -1.21
SKI8	YGL213C	TBS1	P38114	1094 aa		7.47	□□□□□ -1.21
SKI8	YGL213C	SPR3	P41901	512 aa		7.47	□□□□□ -1.21
SKI8	YGL213C	OYE2	Q03558	400 aa	Known RBP	7.47	□□□□□ -1.21
SKI8	YGL213C	SPT2	P06843	333 aa	Predicted RBP	7.46	□□□□□ -1.22
SKI8	YGL213C	MKS1	P34072	584 aa		7.46	□□□□□ -1.22
SKI8	YGL213C	FBP26	P32604	452 aa		7.45	□□□□□ -1.22
SKI8	YGL213C	SEC8	P32855	1065 aa		7.45	□□□□□ -1.22
SKI8	YGL213C	XDJ1	P39102	459 aa		7.45	□□□□□ -1.22
SKI8	YGL213C	BDP1	P46678	594 aa		7.45	□□□□□ -1.22
SKI8	YGL213C	FOX2	Q02207	900 aa	Known RBP	7.45	□□□□□ -1.22
SKI8	YGL213C	SVF1	Q05515	481 aa		7.45	□□□□□ -1.22
SKI8	YGL213C	RPP2B	P02400	110 aa	Known RBP	7.44	□□□□□ -1.22
SKI8	YGL213C	ISC10	P32645	267 aa		7.44	□□□□□ -1.22
SKI8	YGL213C	FRK1	Q03002	865 aa	Predicted RBP	7.44	□□□□□ -1.22
SKI8	YGL213C	BOI1	P38041	980 aa	Known RBP	7.43	□□□□□ -1.22
SKI8	YGL213C	YBR197C	P38306	217 aa		7.43	□□□□□ -1.22
SKI8	YGL213C	TRS120	Q04183	1289 aa		7.43	□□□□□ -1.22
SKI8	YGL213C	MET4	P32389	672 aa		7.42	□□□□□ -1.22
SKI8	YGL213C	CAB1	Q04430	367 aa		7.4	□□□□□ -1.22
SKI8	YGL213C	WTM2	Q12206	467 aa		7.4	□□□□□ -1.22
SKI8	YGL213C	STB3	Q12427	513 aa		7.4	□□□□□ -1.22
SKI8	YGL213C	MET1	P36150	593 aa		7.39	□□□□□ -1.23
SKI8	YGL213C	YJR107W	P47145	328 aa		7.39	□□□□□ -1.23
SKI8	YGL213C	UFD2	P54860	961 aa		7.39	□□□□□ -1.23
SKI8	YGL213C	DFG5	Q05031	458 aa		7.39	□□□□□ -1.23
SKI8	YGL213C	JIP5	Q06214	492 aa	Predicted RBP	7.39	□□□□□ -1.23
SKI8	YGL213C	BDS1	Q08347	646 aa		7.38	□□□□□ -1.23
SKI8	YGL213C	STE6	P12866	1290 aa		7.37	□□□□□ -1.23
SKI8	YGL213C	CST6	P40535	587 aa		7.37	□□□□□ -1.23
SKI8	YGL213C	SUT1	P53032	299 aa	Known RBP	7.37	□□□□□ -1.23
SKI8	YGL213C	RPB10	P22139	70 aa		7.36	□□□□□ -1.23
SKI8	YGL213C	NAP1	P25293	417 aa	Known RBP	7.36	□□□□□ -1.23
SKI8	YGL213C	MRT4	P33201	236 aa	Known RBP	7.36	□□□□□ -1.23
SKI8	YGL213C	DLD3	P39976	496 aa	Known RBP	7.36	□□□□□ -1.23
SKI8	YGL213C	UTP7	P40055	554 aa	Known RBP	7.36	□□□□□ -1.23
SKI8	YGL213C	APC11	Q12157	165 aa		7.36	□□□□□ -1.23
SKI8	YGL213C	SDH2	P21801	266 aa		7.35	□□□□□ -1.23
SKI8	YGL213C	YBL086C	P38177	466 aa		7.35	□□□□□ -1.23
SKI8	YGL213C	GPI13	Q07830	1017 aa		7.35	□□□□□ -1.23
SKI8	YGL213C	RPT1	P33299	467 aa	Known RBP	7.34	□□□□□ -1.23
SKI8	YGL213C	MCM1	P11746	286 aa		7.33	□□□□□ -1.24
SKI8	YGL213C	MRPL33	P20084	86 aa		7.33	□□□□□ -1.24
SKI8	YGL213C	GCD6	P32501	712 aa	Known RBP	7.33	□□□□□ -1.24
SKI8	YGL213C	SCD5	P34758	872 aa		7.33	□□□□□ -1.24
SKI8	YGL213C	HXT5	P38695	592 aa		7.33	□□□□□ -1.24
SKI8	YGL213C	YTA7	P40340	1379 aa		7.33	□□□□□ -1.24
SKI8	YGL213C	PHO4	P07270	312 aa	Known RBP	7.32	□□□□□ -1.24
SKI8	YGL213C	FYV10	P40492	516 aa		7.32	□□□□□ -1.24
SKI8	YGL213C	SUM1	P46676	1062 aa		7.32	□□□□□ -1.24
SKI8	YGL213C	NNF1	P47149	201 aa		7.32	□□□□□ -1.24
SKI8	YGL213C	MNL2	Q12205	849 aa		7.32	□□□□□ -1.24
SKI8	YGL213C	MCM2	P29469	868 aa		7.31	□□□□□ -1.24
SKI8	YGL213C	YPQ2	Q06328	317 aa		7.31	□□□□□ -1.24
SKI8	YGL213C	SMC1	P32908	1225 aa		7.3	□□□□□ -1.24
SKI8	YGL213C	OCA5	P38738	679 aa		7.3	□□□□□ -1.24
SKI8	YGL213C	ALA1	P40825	983 aa	Known RBP	7.3	□□□□□ -1.24
SKI8	YGL213C	DAK2	P43550	591 aa		7.3	□□□□□ -1.24
SKI8	YGL213C	SAM37	P50110	327 aa		7.3	□□□□□ -1.24
SKI8	YGL213C	YNL011C	P53980	444 aa		7.3	□□□□□ -1.24
SKI8	YGL213C	PEP7	P32609	515 aa		7.29	□□□□□ -1.24
SKI8	YGL213C	CDC55	Q00362	526 aa		7.29	□□□□□ -1.24
SKI8	YGL213C	VMA3	P25515	160 aa		7.28	□□□□□ -1.24
SKI8	YGL213C	VPS35	P34110	944 aa		7.28	□□□□□ -1.24
SKI8	YGL213C	HXT8	P40886	569 aa		7.28	□□□□□ -1.24
SKI8	YGL213C	HED1	Q03937	162 aa		7.28	□□□□□ -1.24
SKI8	YGL213C	SPR28	Q04921	423 aa		7.28	□□□□□ -1.24
SKI8	YGL213C	OXR1	Q08952	273 aa		7.28	□□□□□ -1.24
SKI8	YGL213C	LDH1	P38139	375 aa		7.27	□□□□□ -1.25
SKI8	YGL213C	MAD1	P40957	749 aa		7.27	□□□□□ -1.25
SKI8	YGL213C	Q0182	Q9ZZW1	134 aa		7.27	□□□□□ -1.25
SKI8	YGL213C	KTR2	P33550	425 aa		7.26	□□□□□ -1.25
SKI8	YGL213C	CIC1	P38779	376 aa	Known RBP	7.26	□□□□□ -1.25
SKI8	YGL213C	RTT106	P40161	455 aa		7.26	□□□□□ -1.25
SKI8	YGL213C	MAG2	Q06436	670 aa	Known RBP	7.26	□□□□□ -1.25
SKI8	YGL213C	RPS26A	P39938	119 aa	Known RBP	7.25	□□□□□ -1.25
SKI8	YGL213C	RPS26B	P39939	119 aa	Known RBP	7.25	□□□□□ -1.25
SKI8	YGL213C	FIR1	P40020	876 aa		7.25	□□□□□ -1.25
SKI8	YGL213C	RMD1	Q03441	430 aa		7.25	□□□□□ -1.25
SKI8	YGL213C	NOC3	Q07896	663 aa	Predicted RBP	7.25	□□□□□ -1.25
SKI8	YGL213C	DPS1	P04802	557 aa	Known RBP	7.24	□□□□□ -1.25

Retrieved 100 of 5,963 RNA–protein pairs in 37.8 ms