RNA–Protein interactions for RNA: YFR027W

ECO1, Transcript of Acetyltransferase, yeast

Gene ECO1, Length 846 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ECO1	YFR027W	ISR1	Q06098	443 aa	Known RBP	5.05	□□□□□ -1.6
ECO1	YFR027W	RPP2B	P02400	110 aa	Known RBP	5.04	□□□□□ -1.6
ECO1	YFR027W	TTI1	P36097	1038 aa		5.04	□□□□□ -1.6
ECO1	YFR027W	NSG2	P53898	299 aa		5.04	□□□□□ -1.6
ECO1	YFR027W	TAF7	Q05021	590 aa		5.03	□□□□□ -1.6
ECO1	YFR027W	BDS1	Q08347	646 aa		5.03	□□□□□ -1.6
ECO1	YFR027W	CCT8	P47079	568 aa	Known RBP	5.02	□□□□□ -1.61
ECO1	YFR027W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	5.02	□□□□□ -1.61	not detected
ECO1	YFR027W	UTR2	P32623	467 aa		5.01	□□□□□ -1.61
ECO1	YFR027W	VTC4	P47075	721 aa		5.01	□□□□□ -1.61
ECO1	YFR027W	THI72	Q08579	599 aa		5.01	□□□□□ -1.61
ECO1	YFR027W	CUZ1	P53899	274 aa		5	□□□□□ -1.61
ECO1	YFR027W	HDA3	Q06623	655 aa		5	□□□□□ -1.61
ECO1	YFR027W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	5	□□□□□ -1.61	not detected
ECO1	YFR027W	WTM2	Q12206	467 aa		5	□□□□□ -1.61
ECO1	YFR027W	SLX8	P40072	274 aa		4.99	□□□□□ -1.61
ECO1	YFR027W	AI1	P03875	834 aa		4.98	□□□□□ -1.61
ECO1	YFR027W	CPS1	P27614	576 aa		4.98	□□□□□ -1.61
ECO1	YFR027W	YFL034W	P43564	1073 aa		4.98	□□□□□ -1.61
ECO1	YFR027W	DAT1	P13483	248 aa	Known RBP	4.97	□□□□□ -1.61
ECO1	YFR027W	SSA4	P22202	642 aa	Known RBP	4.97	□□□□□ -1.61
ECO1	YFR027W	PHO87	P25360	923 aa		4.97	□□□□□ -1.61
ECO1	YFR027W	TGL4	P36165	910 aa		4.97	□□□□□ -1.61
ECO1	YFR027W	TBS1	P38114	1094 aa		4.97	□□□□□ -1.61
ECO1	YFR027W	DLD3	P39976	496 aa	Known RBP	4.97	□□□□□ -1.61
ECO1	YFR027W	AIM9	P40053	627 aa	Known RBP	4.97	□□□□□ -1.61
ECO1	YFR027W	TSC13	Q99190	310 aa		4.97	□□□□□ -1.61
ECO1	YFR027W	GAL2	P13181	574 aa		4.96	□□□□□ -1.62
ECO1	YFR027W	SWI5	P08153	709 aa		4.95	□□□□□ -1.62
ECO1	YFR027W	HAP4	P14064	554 aa		4.95	□□□□□ -1.62
ECO1	YFR027W	DAL1	P32375	460 aa		4.95	□□□□□ -1.62
ECO1	YFR027W	KTR7	P40504	517 aa		4.95	□□□□□ -1.62
ECO1	YFR027W	ACS2	P52910	683 aa	Known RBP	4.95	□□□□□ -1.62
ECO1	YFR027W	GAS4	Q08271	471 aa		4.95	□□□□□ -1.62
ECO1	YFR027W	RPS6A	P0CX37	236 aa	Known RBP	4.94	□□□□□ -1.62
ECO1	YFR027W	RPS6B	P0CX38	236 aa	Predicted RBP	4.94	□□□□□ -1.62
ECO1	YFR027W	PDI1	P17967	522 aa	Known RBP	4.94	□□□□□ -1.62
ECO1	YFR027W	PUP1	P25043	261 aa		4.94	□□□□□ -1.62
ECO1	YFR027W	CEM1	P39525	442 aa		4.94	□□□□□ -1.62
ECO1	YFR027W	SUM1	P46676	1062 aa		4.94	□□□□□ -1.62
ECO1	YFR027W	NTH2	P35172	780 aa		4.93	□□□□□ -1.62
ECO1	YFR027W	SSN3	P39073	555 aa		4.93	□□□□□ -1.62
ECO1	YFR027W	MSN5	P52918	1224 aa		4.93	□□□□□ -1.62
ECO1	YFR027W	YPQ2	Q06328	317 aa		4.93	□□□□□ -1.62
ECO1	YFR027W	YPR053C	Q6Q5F3	151 aa		4.93	□□□□□ -1.62
ECO1	YFR027W	UBP1	P25037	809 aa		4.92	□□□□□ -1.62
ECO1	YFR027W	ROM1	P53046	1155 aa		4.92	□□□□□ -1.62
ECO1	YFR027W	SYT1	Q06836	1226 aa		4.92	□□□□□ -1.62
ECO1	YFR027W	SUB2	Q07478	446 aa	Known RBP	4.92	□□□□□ -1.62
ECO1	YFR027W	NOB1	Q08444	459 aa	Known RBP	4.92	□□□□□ -1.62
ECO1	YFR027W	MCM1	P11746	286 aa		4.91	□□□□□ -1.62
ECO1	YFR027W	SKN7	P38889	622 aa		4.91	□□□□□ -1.62
ECO1	YFR027W	UTP7	P40055	554 aa	Known RBP	4.91	□□□□□ -1.62
ECO1	YFR027W	SBE2	P42223	864 aa	Known RBP	4.91	□□□□□ -1.62
ECO1	YFR027W	ECM23	Q02710	187 aa		4.91	□□□□□ -1.62
ECO1	YFR027W	CYT1	P07143	309 aa		4.9	□□□□□ -1.63
ECO1	YFR027W	SLA1	P32790	1244 aa		4.9	□□□□□ -1.63
ECO1	YFR027W	DIT1	P21623	536 aa		4.89	□□□□□ -1.63
ECO1	YFR027W	ADE12	P80210	433 aa	Known RBP	4.89	□□□□□ -1.63
ECO1	YFR027W	TDA6	Q06466	467 aa		4.89	□□□□□ -1.63
ECO1	YFR027W	TY1A-DR3	Q12441	440 aa		4.89	□□□□□ -1.63
ECO1	YFR027W	AHP1	P38013	176 aa	Known RBP	4.88	□□□□□ -1.63
ECO1	YFR027W	UBX7	P38349	436 aa		4.88	□□□□□ -1.63
ECO1	YFR027W	JJJ2	P46997	583 aa		4.88	□□□□□ -1.63
ECO1	YFR027W	UBP15	P50101	1230 aa		4.88	□□□□□ -1.63
ECO1	YFR027W	YMR265C	Q03508	461 aa	Known RBP	4.88	□□□□□ -1.63
ECO1	YFR027W	YML083C	Q04526	418 aa		4.88	□□□□□ -1.63
ECO1	YFR027W	VAN1	P23642	535 aa		4.87	□□□□□ -1.63
ECO1	YFR027W	NGR1	P32831	672 aa	Known RBP	4.87	□□□□□ -1.63
ECO1	YFR027W	PUF6	Q04373	656 aa	Known RBP	4.87	□□□□□ -1.63
ECO1	YFR027W	YDR461C-A	Q2V2P7	80 aa		4.87	□□□□□ -1.63
ECO1	YFR027W	SHM1	P37292	490 aa	Predicted RBP	4.86	□□□□□ -1.63
ECO1	YFR027W	ALA1	P40825	983 aa	Known RBP	4.86	□□□□□ -1.63
ECO1	YFR027W	TRS33	Q99394	268 aa		4.86	□□□□□ -1.63
ECO1	YFR027W	IRE1	P32361	1115 aa		4.85	□□□□□ -1.63
ECO1	YFR027W	KRE33	P53914	1056 aa	Known RBP	4.85	□□□□□ -1.63
ECO1	YFR027W	YMR187C	Q03236	431 aa		4.85	□□□□□ -1.63
ECO1	YFR027W	SBP1	P10080	294 aa	Known RBP	4.84	□□□□□ -1.63
ECO1	YFR027W	SSA1	P10591	642 aa	Known RBP	4.84	□□□□□ -1.63
ECO1	YFR027W	RPS31	P05759	152 aa	Known RBP	4.83	□□□□□ -1.64
ECO1	YFR027W	YCK2	P23292	546 aa	Known RBP	4.83	□□□□□ -1.64
ECO1	YFR027W	SUV3	P32580	737 aa		4.83	□□□□□ -1.64
ECO1	YFR027W	SCD5	P34758	872 aa		4.83	□□□□□ -1.64
ECO1	YFR027W	HXT5	P38695	592 aa		4.83	□□□□□ -1.64
ECO1	YFR027W	CWH41	P53008	833 aa		4.83	□□□□□ -1.64
ECO1	YFR027W	YNL165W	P53891	406 aa		4.83	□□□□□ -1.64
ECO1	YFR027W	CWC15	Q03772	175 aa	Known RBP	4.83	□□□□□ -1.64
ECO1	YFR027W	UTP4	Q06679	776 aa	Known RBP	4.83	□□□□□ -1.64
ECO1	YFR027W	SRS2	P12954	1174 aa		4.82	□□□□□ -1.64
ECO1	YFR027W	PDC6	P26263	563 aa	Known RBP	4.82	□□□□□ -1.64
ECO1	YFR027W	MCX1	P38323	520 aa	Predicted RBP	4.82	□□□□□ -1.64
ECO1	YFR027W	NOP2	P40991	618 aa	Known RBP	4.82	□□□□□ -1.64
ECO1	YFR027W	PSH1	Q12161	406 aa		4.82	□□□□□ -1.64
ECO1	YFR027W	LEU1	P07264	779 aa	Known RBP	4.81	□□□□□ -1.64
ECO1	YFR027W	MLF3	P32047	452 aa		4.8	□□□□□ -1.64
ECO1	YFR027W	ALD4	P46367	519 aa	Known RBP	4.8	□□□□□ -1.64
ECO1	YFR027W	CAB1	Q04430	367 aa		4.8	□□□□□ -1.64
ECO1	YFR027W	PUN1	Q06991	263 aa		4.8	□□□□□ -1.64
ECO1	YFR027W	Q0182	Q9ZZW1	134 aa		4.8	□□□□□ -1.64
ECO1	YFR027W	GPM1	P00950	247 aa	Known RBP	4.79	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 186 ms