RNA–Protein interactions for RNA: YER096W

SHC1, Transcript of Sporulation-specific activator of Chs3p (chitin synthase III), yeastyeast

Gene SHC1, Length 1,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHC1YER096W NOP8Q08287 484 aaPredicted RBP9.61□□□□□ -0.87
SHC1YER096W PMD1P32634 1753 aa9.6□□□□□ -0.87
SHC1YER096W MDG1P53885 366 aa9.6□□□□□ -0.87
SHC1YER096W YLR271WQ06152 274 aa9.6□□□□□ -0.87
SHC1YER096W GCD7P32502 381 aaPredicted RBP9.59□□□□□ -0.87
SHC1YER096W SER1P33330 395 aaKnown RBP9.59□□□□□ -0.87
SHC1YER096W SET1P38827 1080 aaKnown RBP9.58□□□□□ -0.88
SHC1YER096W YBL086CP38177 466 aa9.56□□□□□ -0.88
SHC1YER096W UBP12P39538 1254 aa9.56□□□□□ -0.88
SHC1YER096W BUG1Q12191 341 aa9.56□□□□□ -0.88
SHC1YER096W BDF1P35817 686 aa9.56□□□□□ -0.88
SHC1YER096W RIX7Q07844 837 aaKnown RBP9.56□□□□□ -0.88
SHC1YER096W DUR1,2P32528 1835 aaKnown RBP9.56□□□□□ -0.88
SHC1YER096W ITC1P53125 1264 aa9.55□□□□□ -0.88
SHC1YER096W PKH1Q03407 766 aa9.55□□□□□ -0.88
SHC1YER096W RPC31P17890 251 aa9.54□□□□□ -0.88
SHC1YER096W SLA1P32790 1244 aa9.54□□□□□ -0.88
SHC1YER096W NMD2P38798 1089 aaKnown RBP9.54□□□□□ -0.88
SHC1YER096W CTI6Q08923 506 aa9.54□□□□□ -0.88
SHC1YER096W RPL17AP05740 184 aaKnown RBP9.53□□□□□ -0.88
SHC1YER096W TOS1P38288 455 aa9.53□□□□□ -0.88
SHC1YER096W RPL17BP46990 184 aaKnown RBP9.53□□□□□ -0.88
SHC1YER096W PSH1Q12161 406 aa9.53□□□□□ -0.88
SHC1YER096W SSA2P10592 639 aaKnown RBP9.52□□□□□ -0.88
SHC1YER096W UTP22P53254 1237 aaPredicted RBP9.52□□□□□ -0.88
SHC1YER096W NKP2Q06162 153 aa9.51□□□□□ -0.89
SHC1YER096W SSK22P25390 1331 aaPredicted RBP9.5□□□□□ -0.89
SHC1YER096W ALD2P47771 506 aa9.5□□□□□ -0.89
SHC1YER096W UBP16Q02863 499 aa9.5□□□□□ -0.89
SHC1YER096W KTR3P38130 404 aaPredicted RBP9.49□□□□□ -0.89
SHC1YER096W HGH1P48362 394 aaKnown RBP9.49□□□□□ -0.89
SHC1YER096W SAC3P46674 1301 aa9.49□□□□□ -0.89
SHC1YER096W HAT1Q12341 374 aa9.48□□□□□ -0.89
SHC1YER096W RFC1P38630 861 aaKnown RBP9.47□□□□□ -0.89
SHC1YER096W ALD3P54114 506 aa9.47□□□□□ -0.89
SHC1YER096W RAT1Q02792 1006 aaKnown RBP9.47□□□□□ -0.89
SHC1YER096W MTC5Q03897 1148 aa9.47□□□□□ -0.89
SHC1YER096W CDC16P09798 840 aa9.46□□□□□ -0.89
SHC1YER096W GTT3P39996 337 aa9.46□□□□□ -0.89
SHC1YER096W BDP1P46678 594 aa9.46□□□□□ -0.89
SHC1YER096W FIG2P25653 1609 aa9.46□□□□□ -0.9
SHC1YER096W HKR1P41809 1802 aa9.46□□□□□ -0.9
SHC1YER096W AI2P03876 854 aa9.46□□□□□ -0.9
SHC1YER096W HPC2Q01448 625 aa9.46□□□□□ -0.9
SHC1YER096W CAF20P12962 161 aaKnown RBP9.45□□□□□ -0.9
SHC1YER096W RAD50P12753 1312 aa9.45□□□□□ -0.9
SHC1YER096W NOT3P06102 836 aaKnown RBP9.44□□□□□ -0.9
SHC1YER096W UGA2P38067 497 aa9.44□□□□□ -0.9
SHC1YER096W FAS2P19097 1887 aaKnown RBP9.43□□□□□ -0.9
SHC1YER096W ECM21P38167 1117 aaKnown RBP9.43□□□□□ -0.9
SHC1YER096W SSF1P38789 453 aaPredicted RBP9.43□□□□□ -0.9
SHC1YER096W BDF2Q07442 638 aa9.43□□□□□ -0.9
SHC1YER096W ALO1P54783 526 aaKnown RBP9.42□□□□□ -0.9
SHC1YER096W RMD1Q03441 430 aa9.42□□□□□ -0.9
SHC1YER096W ECM16Q04217 1267 aaKnown RBP9.42□□□□□ -0.9
SHC1YER096W GYP5Q12344 894 aa9.42□□□□□ -0.9
SHC1YER096W SEC18P18759 758 aaKnown RBP9.41□□□□□ -0.9
SHC1YER096W BRN1P38170 754 aa9.41□□□□□ -0.9
SHC1YER096W YGL242CP53066 181 aa9.41□□□□□ -0.9
SHC1YER096W RPN7Q06103 429 aaKnown RBP9.41□□□□□ -0.9
SHC1YER096W NCB2Q92317 146 aa9.41□□□□□ -0.9
SHC1YER096W ADR1P07248 1323 aa9.41□□□□□ -0.9
SHC1YER096W PDR18P53756 1333 aa9.41□□□□□ -0.9
SHC1YER096W YNL193WP53870 558 aa9.41□□□□□ -0.9
SHC1YER096W SMY1P32364 656 aaKnown RBP9.4□□□□□ -0.91
SHC1YER096W NGR1P32831 672 aaKnown RBP9.4□□□□□ -0.91
SHC1YER096W PIB2P53191 635 aa9.4□□□□□ -0.91
SHC1YER096W MRPS35P53292 345 aa9.4□□□□□ -0.91
SHC1YER096W SNU66Q12420 587 aaPredicted RBP9.4□□□□□ -0.91
SHC1YER096W EPS1P40557 701 aa9.39□□□□□ -0.91
SHC1YER096W HXT17P53631 564 aa9.39□□□□□ -0.91
SHC1YER096W SYF1Q04048 859 aaPredicted RBP9.39□□□□□ -0.91
SHC1YER096W THI3Q07471 609 aa9.39□□□□□ -0.91
SHC1YER096W MGM1P32266 881 aa9.38□□□□□ -0.91
SHC1YER096W DLD1P32891 587 aa9.38□□□□□ -0.91
SHC1YER096W YGL015CP33199 130 aa9.38□□□□□ -0.91
SHC1YER096W SPL2P38839 148 aa9.38□□□□□ -0.91
SHC1YER096W POM152P39685 1337 aa9.38□□□□□ -0.91
SHC1YER096W HXT13P39924 564 aa9.38□□□□□ -0.91
SHC1YER096W EAF6P47128 113 aa9.38□□□□□ -0.91
SHC1YER096W MLC1P53141 149 aa9.38□□□□□ -0.91
SHC1YER096W GCR2Q01722 534 aa9.38□□□□□ -0.91
SHC1YER096W DIB1Q06819 143 aaPredicted RBP9.38□□□□□ -0.91
SHC1YER096W FRD1P32614 470 aaKnown RBP9.37□□□□□ -0.91
SHC1YER096W ICP55P40051 511 aa9.37□□□□□ -0.91
SHC1YER096W ERT1P38140 529 aa9.36□□□□□ -0.91
SHC1YER096W PFF1P38244 976 aa9.36□□□□□ -0.91
SHC1YER096W DPH6Q12429 685 aa9.36□□□□□ -0.91
SHC1YER096W SUP35P05453 685 aaKnown RBP9.36□□□□□ -0.91
SHC1YER096W OPY1P38271 328 aa9.36□□□□□ -0.91
SHC1YER096W RPN1P38764 993 aaKnown RBP9.36□□□□□ -0.91
SHC1YER096W HAL5P38970 855 aaKnown RBP9.36□□□□□ -0.91
SHC1YER096W YIR014WP40570 242 aa9.36□□□□□ -0.91
SHC1YER096W MSN5P52918 1224 aa9.36□□□□□ -0.91
SHC1YER096W GLO3P38682 493 aaKnown RBP9.35□□□□□ -0.91
SHC1YER096W RPT4P53549 437 aaKnown RBP9.35□□□□□ -0.91
SHC1YER096W KIN4Q01919 800 aa9.35□□□□□ -0.91
SHC1YER096W IRC3Q06683 689 aa9.35□□□□□ -0.91
SHC1YER096W RIM20Q12033 661 aa9.35□□□□□ -0.91
SHC1YER096W VAS1P07806 1104 aaKnown RBP9.34□□□□□ -0.91
Retrieved 100 of 5,963 RNA–protein pairs in 102.8 ms