RNA–Protein interactions for RNA: YER087C-B

SBH1, Transcript of Beta subunit of Sec61p ER translocation complex (Sec61p-Sss1p-Sbh1p), yeastyeast

Gene SBH1, Length 249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SBH1YER087C-B RPP2BP02400 110 aaKnown RBP3.32□□□□□ -1.88
SBH1YER087C-B TPS3P38426 1054 aaKnown RBP3.32□□□□□ -1.88
SBH1YER087C-B BUD9P53226 547 aa3.32□□□□□ -1.88
SBH1YER087C-B YPR084WQ06821 456 aa3.32□□□□□ -1.88
SBH1YER087C-B YKR073CP36153 106 aa3.31□□□□□ -1.88
SBH1YER087C-B TY1A-DR2Q03964 440 aaKnown RBP3.31□□□□□ -1.88
SBH1YER087C-B AOS1Q06624 347 aa3.31□□□□□ -1.88
SBH1YER087C-B DSF2P38213 736 aa3.3□□□□□ -1.88
SBH1YER087C-B GAS5Q08193 484 aa3.3□□□□□ -1.88
SBH1YER087C-B IRE1P32361 1115 aa3.29□□□□□ -1.88
SBH1YER087C-B MED7Q08278 222 aa3.29□□□□□ -1.88
SBH1YER087C-B FRA1Q07825 749 aa3.28□□□□□ -1.88
SBH1YER087C-B PGM2P37012 569 aaKnown RBP3.27□□□□□ -1.89
SBH1YER087C-B ALG14P38242 237 aa3.27□□□□□ -1.89
SBH1YER087C-B UBP5P39944 805 aa3.27□□□□□ -1.89
SBH1YER087C-B RNQ1P25367 405 aa3.26□□□□□ -1.89
SBH1YER087C-B SHM1P37292 490 aaPredicted RBP3.26□□□□□ -1.89
SBH1YER087C-B TOS1P38288 455 aa3.26□□□□□ -1.89
SBH1YER087C-B SPR3P41901 512 aa3.26□□□□□ -1.89
SBH1YER087C-B JJJ2P46997 583 aa3.26□□□□□ -1.89
SBH1YER087C-B GIS1Q03833 894 aa3.26□□□□□ -1.89
SBH1YER087C-B PSH1Q12161 406 aa3.26□□□□□ -1.89
SBH1YER087C-B NHA1Q99271 985 aa3.26□□□□□ -1.89
SBH1YER087C-B GUT2P32191 649 aa3.25□□□□□ -1.89
SBH1YER087C-B ELM1P32801 640 aa3.25□□□□□ -1.89
SBH1YER087C-B CTH1P47976 325 aa3.25□□□□□ -1.89
SBH1YER087C-B PDC6P26263 563 aaKnown RBP3.24□□□□□ -1.89
SBH1YER087C-B COQ2P32378 372 aa3.24□□□□□ -1.89
SBH1YER087C-B UTR2P32623 467 aa3.24□□□□□ -1.89
SBH1YER087C-B YKL222CP35995 705 aa3.24□□□□□ -1.89
SBH1YER087C-B KAE1P36132 386 aa3.24□□□□□ -1.89
SBH1YER087C-B KTR1P27810 393 aaKnown RBP3.23□□□□□ -1.89
SBH1YER087C-B PGM1P33401 570 aaKnown RBP3.23□□□□□ -1.89
SBH1YER087C-B ATF2P53296 535 aa3.23□□□□□ -1.89
SBH1YER087C-B ISR1Q06098 443 aaKnown RBP3.23□□□□□ -1.89
SBH1YER087C-B AI3P03877 415 aa3.22□□□□□ -1.89
SBH1YER087C-B SAC7P17121 654 aa3.21□□□□□ -1.9
SBH1YER087C-B PUB1P32588 453 aaKnown RBP RIP-Chip data3.21□□□□□ -1.9 RIP-Chip
SBH1YER087C-B TBS1P38114 1094 aa3.21□□□□□ -1.9
SBH1YER087C-B MSC7P38694 644 aa3.21□□□□□ -1.9
SBH1YER087C-B SUM1P46676 1062 aa3.21□□□□□ -1.9
SBH1YER087C-B YGR130CP53278 816 aa3.21□□□□□ -1.9
SBH1YER087C-B BRE4Q07660 1125 aa3.21□□□□□ -1.9
SBH1YER087C-B RRM3P38766 723 aa3.2□□□□□ -1.9
SBH1YER087C-B STE20Q03497 939 aaKnown RBP3.2□□□□□ -1.9
SBH1YER087C-B YLR122CQ12312 125 aa3.2□□□□□ -1.9
SBH1YER087C-B SPB4P25808 606 aaPredicted RBP3.19□□□□□ -1.9
SBH1YER087C-B ARI1P53111 347 aaKnown RBP3.18□□□□□ -1.9
SBH1YER087C-B RAD59Q12223 238 aa3.17□□□□□ -1.9
SBH1YER087C-B SPT2P06843 333 aaPredicted RBP3.16□□□□□ -1.9
SBH1YER087C-B NAR1P23503 491 aaKnown RBP3.16□□□□□ -1.9
SBH1YER087C-B YCR015CP25616 317 aa3.16□□□□□ -1.9
SBH1YER087C-B RPS31P05759 152 aaKnown RBP3.15□□□□□ -1.91
SBH1YER087C-B NAB2P32505 525 aaKnown RBP RIP-Chip data3.15□□□□□ -1.91not detected
SBH1YER087C-B NGR1P32831 672 aaKnown RBP3.15□□□□□ -1.91
SBH1YER087C-B ISF1P32488 338 aa3.14□□□□□ -1.91
SBH1YER087C-B CHS2P14180 963 aa3.13□□□□□ -1.91
SBH1YER087C-B SEG2P34250 1132 aa3.13□□□□□ -1.91
SBH1YER087C-B HAL5P38970 855 aaKnown RBP3.13□□□□□ -1.91
SBH1YER087C-B MAG2Q06436 670 aaKnown RBP3.13□□□□□ -1.91
SBH1YER087C-B CYC7P00045 113 aa3.12□□□□□ -1.91
SBH1YER087C-B GIS4Q04233 774 aa3.12□□□□□ -1.91
SBH1YER087C-B NAM7P30771 971 aaKnown RBP3.11□□□□□ -1.91
SBH1YER087C-B PRK1P40494 810 aa3.11□□□□□ -1.91
SBH1YER087C-B ALD2P47771 506 aa3.11□□□□□ -1.91
SBH1YER087C-B RGP1P16664 663 aa3.1□□□□□ -1.91
SBH1YER087C-B AKR1P39010 764 aa3.1□□□□□ -1.91
SBH1YER087C-B SLX8P40072 274 aa3.1□□□□□ -1.91
SBH1YER087C-B EMP47P43555 445 aa3.1□□□□□ -1.91
SBH1YER087C-B LEU1P07264 779 aaKnown RBP3.09□□□□□ -1.91
SBH1YER087C-B LRG1P35688 1017 aa3.09□□□□□ -1.91
SBH1YER087C-B SAF1P38352 637 aa3.09□□□□□ -1.91
SBH1YER087C-B TAF1P46677 1066 aa3.09□□□□□ -1.91
SBH1YER087C-B CSN12P47130 423 aa3.09□□□□□ -1.91
SBH1YER087C-B MAK16P10962 306 aaPredicted RBP3.08□□□□□ -1.92
SBH1YER087C-B SFA1P32771 386 aa3.08□□□□□ -1.92
SBH1YER087C-B ESC8Q08119 714 aa3.08□□□□□ -1.92
SBH1YER087C-B RSC6P25632 483 aa3.07□□□□□ -1.92
SBH1YER087C-B GLC3P32775 704 aa3.07□□□□□ -1.92
SBH1YER087C-B YNL165WP53891 406 aa3.07□□□□□ -1.92
SBH1YER087C-B RPP1AP05318 106 aaPredicted RBP3.06□□□□□ -1.92
SBH1YER087C-B SEA4P38164 1038 aa3.06□□□□□ -1.92
SBH1YER087C-B HDA3Q06623 655 aa3.06□□□□□ -1.92
SBH1YER087C-B GIP4P39732 760 aa3.05□□□□□ -1.92
SBH1YER087C-B YTA6P40328 754 aa3.05□□□□□ -1.92
SBH1YER087C-B SDH1Q00711 640 aa3.05□□□□□ -1.92
SBH1YER087C-B PUF3Q07807 879 aaKnown RBP RIP-Chip data3.05□□□□□ -1.92not detected
SBH1YER087C-B POL12P38121 705 aaPredicted RBP3.04□□□□□ -1.92
SBH1YER087C-B HEH2Q03281 663 aa3.04□□□□□ -1.92
SBH1YER087C-B SPO74P45819 413 aa3.03□□□□□ -1.92
SBH1YER087C-B APL6P46682 809 aa3.03□□□□□ -1.92
SBH1YER087C-B GAS1P22146 559 aaKnown RBP3.02□□□□□ -1.93
SBH1YER087C-B MLF3P32047 452 aa3.02□□□□□ -1.93
SBH1YER087C-B SOH1P38633 127 aa3.02□□□□□ -1.93
SBH1YER087C-B HPC2Q01448 625 aa3.02□□□□□ -1.93
SBH1YER087C-B MRP10O75012 95 aa3.01□□□□□ -1.93
SBH1YER087C-B YPQ2Q06328 317 aa3.01□□□□□ -1.93
SBH1YER087C-B MCM16Q12262 181 aa3.01□□□□□ -1.93
SBH1YER087C-B MTO1P53070 669 aa3□□□□□ -1.93
SBH1YER087C-B Q0182Q9ZZW1 134 aa3□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms