RNA–Protein interactions for RNA: YER008C

SEC3, Transcript of Subunit of the exocyst complex, yeastyeast

Gene SEC3, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC3YER008C SIS2P36024 562 aa2.02□□□□□ -2.09
SEC3YER008C CST6P40535 587 aa2.02□□□□□ -2.09
SEC3YER008C GCR2Q01722 534 aa2.02□□□□□ -2.09
SEC3YER008C SUB2Q07478 446 aaKnown RBP2.02□□□□□ -2.09
SEC3YER008C GEF1P37020 779 aa2.01□□□□□ -2.09
SEC3YER008C NAF1P53919 492 aaKnown RBP2.01□□□□□ -2.09
SEC3YER008C KAR5Q04746 504 aa2.01□□□□□ -2.09
SEC3YER008C REV3P14284 1504 aa2.01□□□□□ -2.09
SEC3YER008C ASH1P34233 588 aa2.01□□□□□ -2.09
SEC3YER008C RRD1P40454 393 aaKnown RBP2.01□□□□□ -2.09
SEC3YER008C AMS1P22855 1083 aa2.01□□□□□ -2.09
SEC3YER008C GRS1P38088 690 aaKnown RBP2.01□□□□□ -2.09
SEC3YER008C SLX8P40072 274 aa2.01□□□□□ -2.09
SEC3YER008C MRX12P47084 519 aa2.01□□□□□ -2.09
SEC3YER008C TRS33Q99394 268 aa2.01□□□□□ -2.09
SEC3YER008C SPT6P23615 1451 aaKnown RBP2□□□□□ -2.09
SEC3YER008C ARG82P07250 355 aa2□□□□□ -2.09
SEC3YER008C CBC2Q08920 208 aaKnown RBP RIP-Chip data2□□□□□ -2.09not detected
SEC3YER008C GAL2P13181 574 aa2□□□□□ -2.09
SEC3YER008C DLD1P32891 587 aa2□□□□□ -2.09
SEC3YER008C NTH2P35172 780 aa2□□□□□ -2.09
SEC3YER008C SUP45P12385 437 aaKnown RBP2□□□□□ -2.09
SEC3YER008C AHP1P38013 176 aaKnown RBP2□□□□□ -2.09
SEC3YER008C ECM2P38241 364 aaKnown RBP2□□□□□ -2.09
SEC3YER008C RPA190P10964 1664 aaKnown RBP1.99□□□□□ -2.09
SEC3YER008C ESP1Q03018 1630 aa1.99□□□□□ -2.09
SEC3YER008C FUR4P05316 633 aaKnown RBP1.99□□□□□ -2.09
SEC3YER008C HAP4P14064 554 aa1.99□□□□□ -2.09
SEC3YER008C AIM9P40053 627 aaKnown RBP1.99□□□□□ -2.09
SEC3YER008C RIM21P48565 533 aa1.99□□□□□ -2.09
SEC3YER008C AGE1Q04412 482 aa1.99□□□□□ -2.09
SEC3YER008C CYT1P07143 309 aa1.99□□□□□ -2.09
SEC3YER008C HDA3Q06623 655 aa1.99□□□□□ -2.09
SEC3YER008C TY1B-JR2P47100 1755 aaKnown RBP1.99□□□□□ -2.09
SEC3YER008C TY1B-ER2Q03619 1755 aa1.99□□□□□ -2.09
SEC3YER008C TY1B-MR1Q04214 1755 aa1.99□□□□□ -2.09
SEC3YER008C TY1B-MR2Q04670 1755 aaKnown RBP1.99□□□□□ -2.09
SEC3YER008C TY1B-LR1Q12088 1755 aaKnown RBP1.99□□□□□ -2.09
SEC3YER008C TY1B-NL1Q12112 1755 aa1.99□□□□□ -2.09
SEC3YER008C TY1B-GR1Q12141 1755 aa1.99□□□□□ -2.09
SEC3YER008C TY1B-BLQ12490 1755 aa1.99□□□□□ -2.09
SEC3YER008C GLO3P38682 493 aaKnown RBP1.99□□□□□ -2.09
SEC3YER008C CLA4P48562 842 aa1.99□□□□□ -2.09
SEC3YER008C YLR346CQ06139 101 aa1.99□□□□□ -2.09
SEC3YER008C RRN6P32786 894 aa1.98□□□□□ -2.09
SEC3YER008C RSC30P38781 883 aa1.98□□□□□ -2.09
SEC3YER008C SUT1P53032 299 aaKnown RBP1.98□□□□□ -2.09
SEC3YER008C MDS3P53094 1487 aa1.98□□□□□ -2.09
SEC3YER008C BNI1P41832 1953 aa1.98□□□□□ -2.09
SEC3YER008C RPS6AP0CX37 236 aaKnown RBP1.98□□□□□ -2.09
SEC3YER008C RPS6BP0CX38 236 aaPredicted RBP1.98□□□□□ -2.09
SEC3YER008C VAC17P25591 423 aa1.98□□□□□ -2.09
SEC3YER008C FRA1Q07825 749 aa1.98□□□□□ -2.09
SEC3YER008C SPA2P23201 1466 aaKnown RBP1.98□□□□□ -2.09
SEC3YER008C NOP8Q08287 484 aaPredicted RBP1.98□□□□□ -2.09
SEC3YER008C WTM2Q12206 467 aa1.98□□□□□ -2.09
SEC3YER008C YRF1-1P0CX20 1796 aa1.98□□□□□ -2.09
SEC3YER008C YRF1-5P0CX21 1796 aa1.98□□□□□ -2.09
SEC3YER008C YRF1-8P0CX22 1796 aa1.98□□□□□ -2.09
SEC3YER008C PUP1P25043 261 aa1.97□□□□□ -2.09
SEC3YER008C PHO87P25360 923 aa1.97□□□□□ -2.09
SEC3YER008C AIR1P40507 360 aaKnown RBP1.97□□□□□ -2.09
SEC3YER008C HED1Q03937 162 aa1.97□□□□□ -2.09
SEC3YER008C CDC4P07834 779 aa1.97□□□□□ -2.09
SEC3YER008C ACS2P52910 683 aaKnown RBP1.97□□□□□ -2.09
SEC3YER008C TSC13Q99190 310 aa1.97□□□□□ -2.09
SEC3YER008C PEP7P32609 515 aa1.97□□□□□ -2.09
SEC3YER008C GAS4Q08271 471 aa1.97□□□□□ -2.09
SEC3YER008C NAP1P25293 417 aaKnown RBP1.96□□□□□ -2.1
SEC3YER008C YBL113CQ7M4S9 792 aa1.96□□□□□ -2.1
SEC3YER008C FIR1P40020 876 aa1.96□□□□□ -2.1
SEC3YER008C LSC2P53312 427 aa1.96□□□□□ -2.1
SEC3YER008C PNP1Q05788 311 aa1.96□□□□□ -2.1
SEC3YER008C ISC10P32645 267 aa1.96□□□□□ -2.1
SEC3YER008C MTO1P53070 669 aa1.96□□□□□ -2.1
SEC3YER008C MRX10Q05648 414 aa1.96□□□□□ -2.1
SEC3YER008C NOB1Q08444 459 aaKnown RBP1.96□□□□□ -2.1
SEC3YER008C FBP26P32604 452 aa1.95□□□□□ -2.1
SEC3YER008C YJR115WP47152 169 aa1.95□□□□□ -2.1
SEC3YER008C NAB2P32505 525 aaKnown RBP RIP-Chip data1.95□□□□□ -2.1not detected
SEC3YER008C BRE2P43132 505 aa1.95□□□□□ -2.1
SEC3YER008C ISU1Q03020 165 aa1.95□□□□□ -2.1
SEC3YER008C SGS1P35187 1447 aa1.95□□□□□ -2.1
SEC3YER008C SWI5P08153 709 aa1.95□□□□□ -2.1
SEC3YER008C PTK2P47116 818 aaKnown RBP1.95□□□□□ -2.1
SEC3YER008C HAL5P38970 855 aaKnown RBP1.94□□□□□ -2.1
SEC3YER008C ATG14P38270 344 aa1.94□□□□□ -2.1
SEC3YER008C Q0182Q9ZZW1 134 aa1.94□□□□□ -2.1
SEC3YER008C MYO2P19524 1574 aaKnown RBP1.94□□□□□ -2.1
SEC3YER008C EMW1P42842 904 aaKnown RBP1.94□□□□□ -2.1
SEC3YER008C MET32Q12041 191 aa1.94□□□□□ -2.1
SEC3YER008C NOP7P53261 605 aaKnown RBP1.94□□□□□ -2.1
SEC3YER008C IRC20Q06554 1556 aa1.93□□□□□ -2.1
SEC3YER008C BUD4P47136 1447 aa1.93□□□□□ -2.1
SEC3YER008C SRS2P12954 1174 aa1.93□□□□□ -2.1
SEC3YER008C YBR287WP38355 427 aa1.93□□□□□ -2.1
SEC3YER008C AAD14P42884 376 aa1.93□□□□□ -2.1
SEC3YER008C YMR265CQ03508 461 aaKnown RBP1.93□□□□□ -2.1
SEC3YER008C ALD4P46367 519 aaKnown RBP1.93□□□□□ -2.1
SEC3YER008C TCB1Q12466 1186 aa1.93□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms