RNA–Protein interactions for RNA: YDR332W

IRC3, Transcript of Putative RNA helicase of the DEAH/D-box family, yeast

Gene IRC3, Length 2,070 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
IRC3	YDR332W	NGR1	P32831	672 aa	Known RBP	4.69	□□□□□ -1.66
IRC3	YDR332W	SPT23	P35210	1082 aa		4.69	□□□□□ -1.66
IRC3	YDR332W	YBR197C	P38306	217 aa		4.69	□□□□□ -1.66
IRC3	YDR332W	YTA7	P40340	1379 aa		4.68	□□□□□ -1.66
IRC3	YDR332W	KTR2	P33550	425 aa		4.68	□□□□□ -1.66
IRC3	YDR332W	TRS33	Q99394	268 aa		4.68	□□□□□ -1.66
IRC3	YDR332W	PTC2	P39966	464 aa	Known RBP	4.68	□□□□□ -1.66
IRC3	YDR332W	FKH1	P40466	484 aa		4.68	□□□□□ -1.66
IRC3	YDR332W	SVF1	Q05515	481 aa		4.68	□□□□□ -1.66
IRC3	YDR332W	SWI5	P08153	709 aa		4.67	□□□□□ -1.66
IRC3	YDR332W	MET1	P36150	593 aa		4.67	□□□□□ -1.66
IRC3	YDR332W	FYV10	P40492	516 aa		4.67	□□□□□ -1.66
IRC3	YDR332W	YFL034W	P43564	1073 aa		4.67	□□□□□ -1.66
IRC3	YDR332W	APC11	Q12157	165 aa		4.67	□□□□□ -1.66
IRC3	YDR332W	PHO4	P07270	312 aa	Known RBP	4.66	□□□□□ -1.66
IRC3	YDR332W	RPS6A	P0CX37	236 aa	Known RBP	4.66	□□□□□ -1.66
IRC3	YDR332W	RPS6B	P0CX38	236 aa	Predicted RBP	4.66	□□□□□ -1.66
IRC3	YDR332W	EMW1	P42842	904 aa	Known RBP	4.66	□□□□□ -1.66
IRC3	YDR332W	TRS120	Q04183	1289 aa		4.66	□□□□□ -1.66
IRC3	YDR332W	CAB1	Q04430	367 aa		4.66	□□□□□ -1.66
IRC3	YDR332W	CYT1	P07143	309 aa		4.66	□□□□□ -1.66
IRC3	YDR332W	PAT1	P25644	796 aa	Known RBP	4.66	□□□□□ -1.66
IRC3	YDR332W	SPT16	P32558	1035 aa	Known RBP	4.65	□□□□□ -1.66
IRC3	YDR332W	SPT2	P06843	333 aa	Predicted RBP	4.65	□□□□□ -1.67
IRC3	YDR332W	APP1	P53933	587 aa		4.65	□□□□□ -1.67
IRC3	YDR332W	AIR2	Q12476	344 aa	Known RBP	4.65	□□□□□ -1.67
IRC3	YDR332W	MCM2	P29469	868 aa		4.64	□□□□□ -1.67
IRC3	YDR332W	ISC10	P32645	267 aa		4.64	□□□□□ -1.67
IRC3	YDR332W	MGE1	P38523	228 aa		4.64	□□□□□ -1.67
IRC3	YDR332W	DAK2	P43550	591 aa		4.64	□□□□□ -1.67
IRC3	YDR332W	ISU1	Q03020	165 aa		4.64	□□□□□ -1.67
IRC3	YDR332W	JIP5	Q06214	492 aa	Predicted RBP	4.64	□□□□□ -1.67
IRC3	YDR332W	RPB10	P22139	70 aa		4.63	□□□□□ -1.67
IRC3	YDR332W	SPR28	Q04921	423 aa		4.63	□□□□□ -1.67
IRC3	YDR332W	SDH2	P21801	266 aa		4.63	□□□□□ -1.67
IRC3	YDR332W	HXT5	P38695	592 aa		4.63	□□□□□ -1.67
IRC3	YDR332W	PUS5	Q06244	254 aa		4.62	□□□□□ -1.67
IRC3	YDR332W	TOS4	Q06266	489 aa		4.62	□□□□□ -1.67
IRC3	YDR332W	SPR3	P41901	512 aa		4.61	□□□□□ -1.67
IRC3	YDR332W	NNF1	P47149	201 aa		4.61	□□□□□ -1.67
IRC3	YDR332W	CWH41	P53008	833 aa		4.61	□□□□□ -1.67
IRC3	YDR332W	YPQ2	Q06328	317 aa		4.61	□□□□□ -1.67
IRC3	YDR332W	FBP26	P32604	452 aa		4.61	□□□□□ -1.67
IRC3	YDR332W	RPT1	P33299	467 aa	Known RBP	4.61	□□□□□ -1.67
IRC3	YDR332W	PRE3	P38624	215 aa		4.61	□□□□□ -1.67
IRC3	YDR332W	CST6	P40535	587 aa		4.61	□□□□□ -1.67
IRC3	YDR332W	ALD3	P54114	506 aa		4.61	□□□□□ -1.67
IRC3	YDR332W	STE6	P12866	1290 aa		4.6	□□□□□ -1.67
IRC3	YDR332W	UTR2	P32623	467 aa		4.6	□□□□□ -1.67
IRC3	YDR332W	FOX2	Q02207	900 aa	Known RBP	4.6	□□□□□ -1.67
IRC3	YDR332W	KIP2	P28743	706 aa		4.6	□□□□□ -1.67
IRC3	YDR332W	SAS4	Q04003	481 aa		4.6	□□□□□ -1.67
IRC3	YDR332W	SPC42	P36094	363 aa		4.59	□□□□□ -1.67
IRC3	YDR332W	VAC8	P39968	578 aa		4.59	□□□□□ -1.67
IRC3	YDR332W	BDP1	P46678	594 aa		4.59	□□□□□ -1.67
IRC3	YDR332W	MRPL33	P20084	86 aa		4.58	□□□□□ -1.68
IRC3	YDR332W	YNL011C	P53980	444 aa		4.58	□□□□□ -1.68
IRC3	YDR332W	UFD2	P54860	961 aa		4.58	□□□□□ -1.68
IRC3	YDR332W	VPS16	Q03308	798 aa		4.58	□□□□□ -1.68
IRC3	YDR332W	MRT4	P33201	236 aa	Known RBP	4.58	□□□□□ -1.68
IRC3	YDR332W	ALD6	P54115	500 aa	Known RBP	4.58	□□□□□ -1.68
IRC3	YDR332W	DOS2	P54858	310 aa		4.58	□□□□□ -1.68
IRC3	YDR332W	BDS1	Q08347	646 aa		4.58	□□□□□ -1.68
IRC3	YDR332W	PIN2	Q12057	282 aa		4.58	□□□□□ -1.68
IRC3	YDR332W	WTM2	Q12206	467 aa		4.58	□□□□□ -1.68
IRC3	YDR332W	YOL098C	Q12496	1037 aa		4.58	□□□□□ -1.68
IRC3	YDR332W	DAT1	P13483	248 aa	Known RBP	4.57	□□□□□ -1.68
IRC3	YDR332W	MKS1	P34072	584 aa		4.57	□□□□□ -1.68
IRC3	YDR332W	YBL086C	P38177	466 aa		4.57	□□□□□ -1.68
IRC3	YDR332W	RPS26A	P39938	119 aa	Known RBP	4.57	□□□□□ -1.68
IRC3	YDR332W	RPS26B	P39939	119 aa	Known RBP	4.57	□□□□□ -1.68
IRC3	YDR332W	SYH1	Q02875	849 aa	Known RBP	4.57	□□□□□ -1.68
IRC3	YDR332W	IOC3	P43596	787 aa		4.57	□□□□□ -1.68
IRC3	YDR332W	SUT1	P53032	299 aa	Known RBP	4.57	□□□□□ -1.68
IRC3	YDR332W	CDC55	Q00362	526 aa		4.57	□□□□□ -1.68
IRC3	YDR332W	RSC4	Q02206	625 aa		4.57	□□□□□ -1.68
IRC3	YDR332W	GYP1	Q08484	637 aa		4.57	□□□□□ -1.68
IRC3	YDR332W	CYC8	P14922	966 aa		4.56	□□□□□ -1.68
IRC3	YDR332W	CHL1	P22516	861 aa	Predicted RBP	4.56	□□□□□ -1.68
IRC3	YDR332W	VMA3	P25515	160 aa		4.56	□□□□□ -1.68
IRC3	YDR332W	VPS35	P34110	944 aa		4.56	□□□□□ -1.68
IRC3	YDR332W	BRN1	P38170	754 aa		4.56	□□□□□ -1.68
IRC3	YDR332W	YNL165W	P53891	406 aa		4.56	□□□□□ -1.68
IRC3	YDR332W	MCM1	P11746	286 aa		4.55	□□□□□ -1.68
IRC3	YDR332W	DFG5	Q05031	458 aa		4.55	□□□□□ -1.68
IRC3	YDR332W	FPR4	Q06205	392 aa	Predicted RBP	4.55	□□□□□ -1.68
IRC3	YDR332W	UTP7	P40055	554 aa	Known RBP	4.55	□□□□□ -1.68
IRC3	YDR332W	MTO1	P53070	669 aa		4.55	□□□□□ -1.68
IRC3	YDR332W	YGR122W	P53272	402 aa		4.55	□□□□□ -1.68
IRC3	YDR332W	RMD1	Q03441	430 aa		4.55	□□□□□ -1.68
IRC3	YDR332W	HXK1	P04806	485 aa	Known RBP	4.54	□□□□□ -1.68
IRC3	YDR332W	TBS1	P38114	1094 aa		4.54	□□□□□ -1.68
IRC3	YDR332W	SUM1	P46676	1062 aa		4.54	□□□□□ -1.68
IRC3	YDR332W	GCD6	P32501	712 aa	Known RBP	4.53	□□□□□ -1.68
IRC3	YDR332W	FAA3	P39002	694 aa		4.53	□□□□□ -1.68
IRC3	YDR332W	HXT8	P40886	569 aa		4.53	□□□□□ -1.68
IRC3	YDR332W	RGD2	P43556	714 aa		4.53	□□□□□ -1.68
IRC3	YDR332W	RNH70	P53331	553 aa		4.53	□□□□□ -1.68
IRC3	YDR332W	YAF9	P53930	226 aa		4.53	□□□□□ -1.68
IRC3	YDR332W	SSF2	Q12153	453 aa	Predicted RBP	4.53	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 69.7 ms