RNA–Protein interactions for RNA: YDR240C

SNU56, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU56, Length 1,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU56YDR240C ATG32P40458 529 aa5.74□□□□□ -1.49
SNU56YDR240C TIF1P10081 395 aaKnown RBP5.73□□□□□ -1.49
SNU56YDR240C UTR2P32623 467 aa5.73□□□□□ -1.49
SNU56YDR240C UBP15P50101 1230 aa5.73□□□□□ -1.49
SNU56YDR240C SOH1P38633 127 aa5.72□□□□□ -1.49
SNU56YDR240C NRD1P53617 575 aaKnown RBP RIP-Chip data5.72□□□□□ -1.49not detected
SNU56YDR240C DIT1P21623 536 aa5.71□□□□□ -1.49
SNU56YDR240C TBS1P38114 1094 aa5.71□□□□□ -1.49
SNU56YDR240C HAL5P38970 855 aaKnown RBP5.71□□□□□ -1.49
SNU56YDR240C ADE12P80210 433 aaKnown RBP5.71□□□□□ -1.49
SNU56YDR240C YMR265CQ03508 461 aaKnown RBP5.71□□□□□ -1.49
SNU56YDR240C MRX10Q05648 414 aa5.71□□□□□ -1.49
SNU56YDR240C SYT1Q06836 1226 aa5.71□□□□□ -1.49
SNU56YDR240C WTM2Q12206 467 aa5.71□□□□□ -1.49
SNU56YDR240C YPR053CQ6Q5F3 151 aa5.71□□□□□ -1.49
SNU56YDR240C RTG2P32608 588 aaKnown RBP5.71□□□□□ -1.5
SNU56YDR240C MSN5P52918 1224 aa5.71□□□□□ -1.5
SNU56YDR240C DMA2P53924 522 aa5.71□□□□□ -1.5
SNU56YDR240C RDS2P19541 446 aaKnown RBP5.7□□□□□ -1.5
SNU56YDR240C SIS2P36024 562 aa5.7□□□□□ -1.5
SNU56YDR240C YDR461C-AQ2V2P7 80 aa5.7□□□□□ -1.5
SNU56YDR240C ENO1P00924 437 aaKnown RBP5.69□□□□□ -1.5
SNU56YDR240C DAT1P13483 248 aaKnown RBP5.69□□□□□ -1.5
SNU56YDR240C SLA1P32790 1244 aa5.68□□□□□ -1.5
SNU56YDR240C SSN3P39073 555 aa5.68□□□□□ -1.5
SNU56YDR240C KRE33P53914 1056 aaKnown RBP5.68□□□□□ -1.5
SNU56YDR240C HDA3Q06623 655 aa5.68□□□□□ -1.5
SNU56YDR240C SLX8P40072 274 aa5.67□□□□□ -1.5
SNU56YDR240C YFL034WP43564 1073 aa5.67□□□□□ -1.5
SNU56YDR240C SKN7P38889 622 aa5.66□□□□□ -1.5
SNU56YDR240C TY1A-DR3Q12441 440 aa5.66□□□□□ -1.5
SNU56YDR240C PEP12P32854 288 aa5.65□□□□□ -1.5
SNU56YDR240C AHP1P38013 176 aaKnown RBP5.65□□□□□ -1.5
SNU56YDR240C TDA6Q06466 467 aa5.65□□□□□ -1.5
SNU56YDR240C AIM9P40053 627 aaKnown RBP5.64□□□□□ -1.51
SNU56YDR240C SBE2P42223 864 aaKnown RBP5.64□□□□□ -1.51
SNU56YDR240C SUM1P46676 1062 aa5.64□□□□□ -1.51
SNU56YDR240C CBC2Q08920 208 aaKnown RBP RIP-Chip data5.64□□□□□ -1.51not detected
SNU56YDR240C SBP1P10080 294 aaKnown RBP5.64□□□□□ -1.51
SNU56YDR240C YMR187CQ03236 431 aa5.64□□□□□ -1.51
SNU56YDR240C SWI5P08153 709 aa5.61□□□□□ -1.51
SNU56YDR240C UTP7P40055 554 aaKnown RBP5.61□□□□□ -1.51
SNU56YDR240C TSC13Q99190 310 aa5.61□□□□□ -1.51
SNU56YDR240C MCX1P38323 520 aaPredicted RBP5.6□□□□□ -1.51
SNU56YDR240C YNR014WP53719 212 aa5.6□□□□□ -1.51
SNU56YDR240C YPQ2Q06328 317 aa5.6□□□□□ -1.51
SNU56YDR240C RPS6AP0CX37 236 aaKnown RBP5.59□□□□□ -1.51
SNU56YDR240C RPS6BP0CX38 236 aaPredicted RBP5.59□□□□□ -1.51
SNU56YDR240C MCM1P11746 286 aa5.59□□□□□ -1.51
SNU56YDR240C PHO87P25360 923 aa5.59□□□□□ -1.51
SNU56YDR240C ALA1P40825 983 aaKnown RBP5.59□□□□□ -1.51
SNU56YDR240C JJJ2P46997 583 aa5.59□□□□□ -1.51
SNU56YDR240C GPM1P00950 247 aaKnown RBP5.58□□□□□ -1.52
SNU56YDR240C HAP4P14064 554 aa5.58□□□□□ -1.52
SNU56YDR240C NTH2P35172 780 aa5.58□□□□□ -1.52
SNU56YDR240C GAS4Q08271 471 aa5.58□□□□□ -1.52
SNU56YDR240C PDI1P17967 522 aaKnown RBP5.57□□□□□ -1.52
SNU56YDR240C FPS1P23900 669 aa5.57□□□□□ -1.52
SNU56YDR240C TTI1P36097 1038 aa5.57□□□□□ -1.52
SNU56YDR240C UBP1P25037 809 aa5.56□□□□□ -1.52
SNU56YDR240C IRE1P32361 1115 aa5.56□□□□□ -1.52
SNU56YDR240C CYT1P07143 309 aa5.55□□□□□ -1.52
SNU56YDR240C BOI2P39969 1040 aa5.55□□□□□ -1.52
SNU56YDR240C GAL2P13181 574 aa5.54□□□□□ -1.52
SNU56YDR240C YCK2P23292 546 aaKnown RBP5.54□□□□□ -1.52
SNU56YDR240C KTR7P40504 517 aa5.54□□□□□ -1.52
SNU56YDR240C ACS2P52910 683 aaKnown RBP5.54□□□□□ -1.52
SNU56YDR240C MET1P36150 593 aa5.53□□□□□ -1.52
SNU56YDR240C TGL4P36165 910 aa5.53□□□□□ -1.52
SNU56YDR240C SHM1P37292 490 aaPredicted RBP5.53□□□□□ -1.52
SNU56YDR240C MRPL16P38064 232 aa5.52□□□□□ -1.53
SNU56YDR240C YDR215CQ12240 137 aa5.52□□□□□ -1.53
SNU56YDR240C PDC6P26263 563 aaKnown RBP5.51□□□□□ -1.53
SNU56YDR240C PSH1Q12161 406 aa5.51□□□□□ -1.53
SNU56YDR240C RPP1AP05318 106 aaPredicted RBP5.51□□□□□ -1.53
SNU56YDR240C RPS31P05759 152 aaKnown RBP5.51□□□□□ -1.53
SNU56YDR240C KNS1P32350 737 aaPredicted RBP5.51□□□□□ -1.53
SNU56YDR240C YTA6P40328 754 aa5.51□□□□□ -1.53
SNU56YDR240C PDC5P16467 563 aaKnown RBP5.5□□□□□ -1.53
SNU56YDR240C ROM1P53046 1155 aa5.5□□□□□ -1.53
SNU56YDR240C UTP4Q06679 776 aaKnown RBP5.5□□□□□ -1.53
SNU56YDR240C STB3Q12427 513 aa5.5□□□□□ -1.53
SNU56YDR240C LEU1P07264 779 aaKnown RBP5.49□□□□□ -1.53
SNU56YDR240C VAN1P23642 535 aa5.49□□□□□ -1.53
SNU56YDR240C NGR1P32831 672 aaKnown RBP5.49□□□□□ -1.53
SNU56YDR240C SCD5P34758 872 aa5.49□□□□□ -1.53
SNU56YDR240C AMN1P38285 549 aaPredicted RBP5.49□□□□□ -1.53
SNU56YDR240C SLN1P39928 1220 aaPredicted RBP5.49□□□□□ -1.53
SNU56YDR240C SSA4P22202 642 aaKnown RBP5.48□□□□□ -1.53
SNU56YDR240C CPS1P27614 576 aa5.48□□□□□ -1.53
SNU56YDR240C TRS33Q99394 268 aa5.48□□□□□ -1.53
SNU56YDR240C SPR3P41901 512 aa5.47□□□□□ -1.53
SNU56YDR240C ECM23Q02710 187 aa5.47□□□□□ -1.53
SNU56YDR240C RLF2Q12495 606 aa5.47□□□□□ -1.53
SNU56YDR240C MLF3P32047 452 aa5.46□□□□□ -1.53
SNU56YDR240C TAT1P38085 619 aa5.46□□□□□ -1.53
SNU56YDR240C LSB6P42951 607 aa5.46□□□□□ -1.53
SNU56YDR240C CWH41P53008 833 aa5.46□□□□□ -1.53
SNU56YDR240C YNL165WP53891 406 aa5.46□□□□□ -1.53
SNU56YDR240C TY1A-DR2Q03964 440 aaKnown RBP5.46□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 11.1 ms