RNA–Protein interactions for RNA: YDR112W

IRC2, Transcript of Dubious open reading frame, yeast

Gene IRC2, Length 309 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
IRC2	YDR112W	VAN1	P23642	535 aa		4.98	□□□□□ -1.61
IRC2	YDR112W	GEF1	P37020	779 aa		4.98	□□□□□ -1.61
IRC2	YDR112W	ALA1	P40825	983 aa	Known RBP	4.98	□□□□□ -1.61
IRC2	YDR112W	ROM1	P53046	1155 aa		4.98	□□□□□ -1.61
IRC2	YDR112W	DLD1	P32891	587 aa		4.97	□□□□□ -1.61
IRC2	YDR112W	NUP85	P46673	744 aa		4.97	□□□□□ -1.61
IRC2	YDR112W	LSC2	P53312	427 aa		4.97	□□□□□ -1.61
IRC2	YDR112W	CWH41	P53008	833 aa		4.96	□□□□□ -1.62
IRC2	YDR112W	PUF6	Q04373	656 aa	Known RBP	4.96	□□□□□ -1.62
IRC2	YDR112W	YLR346C	Q06139	101 aa		4.96	□□□□□ -1.62
IRC2	YDR112W	TRS33	Q99394	268 aa		4.96	□□□□□ -1.62
IRC2	YDR112W	SUM1	P46676	1062 aa		4.95	□□□□□ -1.62
IRC2	YDR112W	YJR098C	P47139	656 aa		4.94	□□□□□ -1.62
IRC2	YDR112W	PUN1	Q06991	263 aa		4.94	□□□□□ -1.62
IRC2	YDR112W	UBP2	Q01476	1272 aa		4.93	□□□□□ -1.62
IRC2	YDR112W	YPL062W	Q02781	134 aa		4.93	□□□□□ -1.62
IRC2	YDR112W	OPT2	Q06593	877 aa		4.92	□□□□□ -1.62
IRC2	YDR112W	TCB1	Q12466	1186 aa		4.92	□□□□□ -1.62
IRC2	YDR112W	UBP1	P25037	809 aa		4.91	□□□□□ -1.62
IRC2	YDR112W	CDC3	P32457	520 aa	Known RBP	4.91	□□□□□ -1.62
IRC2	YDR112W	NGR1	P32831	672 aa	Known RBP	4.91	□□□□□ -1.62
IRC2	YDR112W	AHP1	P38013	176 aa	Known RBP	4.91	□□□□□ -1.62
IRC2	YDR112W	SSN3	P39073	555 aa		4.91	□□□□□ -1.62
IRC2	YDR112W	MSN5	P52918	1224 aa		4.91	□□□□□ -1.62
IRC2	YDR112W	YDR444W	Q04093	687 aa		4.91	□□□□□ -1.62
IRC2	YDR112W	SRS2	P12954	1174 aa		4.9	□□□□□ -1.63
IRC2	YDR112W	MET22	P32179	357 aa		4.9	□□□□□ -1.63
IRC2	YDR112W	DAL1	P32375	460 aa		4.9	□□□□□ -1.63
IRC2	YDR112W	CWC15	Q03772	175 aa	Known RBP	4.9	□□□□□ -1.63
IRC2	YDR112W	PNP1	Q05788	311 aa		4.9	□□□□□ -1.63
IRC2	YDR112W	MCM1	P11746	286 aa		4.89	□□□□□ -1.63
IRC2	YDR112W	ALD4	P46367	519 aa	Known RBP	4.89	□□□□□ -1.63
IRC2	YDR112W	SCW11	P53189	542 aa		4.89	□□□□□ -1.63
IRC2	YDR112W	YPQ2	Q06328	317 aa		4.89	□□□□□ -1.63
IRC2	YDR112W	GAR1	P28007	205 aa	Known RBP	4.88	□□□□□ -1.63
IRC2	YDR112W	VTC4	P47075	721 aa		4.88	□□□□□ -1.63
IRC2	YDR112W	KAR5	Q04746	504 aa		4.88	□□□□□ -1.63
IRC2	YDR112W	LCB5	Q06147	687 aa	Known RBP	4.88	□□□□□ -1.63
IRC2	YDR112W	FUR4	P05316	633 aa	Known RBP	4.87	□□□□□ -1.63
IRC2	YDR112W	GBP2	P25555	427 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
IRC2	YDR112W	IRE1	P32361	1115 aa		4.87	□□□□□ -1.63
IRC2	YDR112W	SUV3	P32580	737 aa		4.87	□□□□□ -1.63
IRC2	YDR112W	RRN6	P32786	894 aa		4.87	□□□□□ -1.63
IRC2	YDR112W	GLY1	P37303	387 aa	Known RBP	4.87	□□□□□ -1.63
IRC2	YDR112W	YTA6	P40328	754 aa		4.87	□□□□□ -1.63
IRC2	YDR112W	JJJ2	P46997	583 aa		4.87	□□□□□ -1.63
IRC2	YDR112W	FOX2	Q02207	900 aa	Known RBP	4.87	□□□□□ -1.63
IRC2	YDR112W	Q0182	Q9ZZW1	134 aa		4.87	□□□□□ -1.63
IRC2	YDR112W	SCD5	P34758	872 aa		4.86	□□□□□ -1.63
IRC2	YDR112W	TPS3	P38426	1054 aa	Known RBP	4.86	□□□□□ -1.63
IRC2	YDR112W	OSH7	P38755	437 aa		4.86	□□□□□ -1.63
IRC2	YDR112W	HAT1	Q12341	374 aa		4.86	□□□□□ -1.63
IRC2	YDR112W	TY1A-BL	Q12266	440 aa		4.85	□□□□□ -1.63
IRC2	YDR112W	MLF3	P32047	452 aa		4.84	□□□□□ -1.63
IRC2	YDR112W	ISC10	P32645	267 aa		4.84	□□□□□ -1.63
IRC2	YDR112W	SLA1	P32790	1244 aa		4.84	□□□□□ -1.63
IRC2	YDR112W	SHM1	P37292	490 aa	Predicted RBP	4.84	□□□□□ -1.63
IRC2	YDR112W	YBR197C	P38306	217 aa		4.84	□□□□□ -1.63
IRC2	YDR112W	UBP15	P50101	1230 aa		4.84	□□□□□ -1.63
IRC2	YDR112W	YNL165W	P53891	406 aa		4.84	□□□□□ -1.63
IRC2	YDR112W	CAB1	Q04430	367 aa		4.84	□□□□□ -1.63
IRC2	YDR112W	HXT5	P38695	592 aa		4.83	□□□□□ -1.64
IRC2	YDR112W	TY1A-DR3	Q12441	440 aa		4.83	□□□□□ -1.64
IRC2	YDR112W	CDC19	P00549	500 aa	Known RBP	4.82	□□□□□ -1.64
IRC2	YDR112W	PDC6	P26263	563 aa	Known RBP	4.82	□□□□□ -1.64
IRC2	YDR112W	UTP4	Q06679	776 aa	Known RBP	4.82	□□□□□ -1.64
IRC2	YDR112W	RPS31	P05759	152 aa	Known RBP	4.81	□□□□□ -1.64
IRC2	YDR112W	MRPL33	P20084	86 aa		4.81	□□□□□ -1.64
IRC2	YDR112W	GLO3	P38682	493 aa	Known RBP	4.81	□□□□□ -1.64
IRC2	YDR112W	BOL3	P39724	118 aa		4.81	□□□□□ -1.64
IRC2	YDR112W	MTO1	P53070	669 aa		4.81	□□□□□ -1.64
IRC2	YDR112W	CAF120	P53836	1060 aa		4.81	□□□□□ -1.64
IRC2	YDR112W	PSH1	Q12161	406 aa		4.81	□□□□□ -1.64
IRC2	YDR112W	YBL113C	Q7M4S9	792 aa		4.8	□□□□□ -1.64
IRC2	YDR112W	VMA3	P25515	160 aa		4.79	□□□□□ -1.64
IRC2	YDR112W	KAP122	P32767	1081 aa		4.79	□□□□□ -1.64
IRC2	YDR112W	GRS1	P38088	690 aa	Known RBP	4.79	□□□□□ -1.64
IRC2	YDR112W	LDH1	P38139	375 aa		4.79	□□□□□ -1.64
IRC2	YDR112W	ACO2	P39533	789 aa		4.79	□□□□□ -1.64
IRC2	YDR112W	QDR2	P40474	542 aa		4.79	□□□□□ -1.64
IRC2	YDR112W	QDR1	P40475	563 aa		4.79	□□□□□ -1.64
IRC2	YDR112W	YIR007W	P40566	764 aa		4.79	□□□□□ -1.64
IRC2	YDR112W	ROG3	P43602	733 aa		4.79	□□□□□ -1.64
IRC2	YDR112W	TY1A-MR1	Q04215	440 aa		4.79	□□□□□ -1.64
IRC2	YDR112W	LSO1	Q3E827	93 aa		4.79	□□□□□ -1.64
IRC2	YDR112W	SLD2	P34252	453 aa		4.78	□□□□□ -1.64
IRC2	YDR112W	MRPL16	P38064	232 aa		4.78	□□□□□ -1.64
IRC2	YDR112W	DYS1	P38791	387 aa		4.78	□□□□□ -1.64
IRC2	YDR112W	ERP5	P38819	212 aa		4.78	□□□□□ -1.64
IRC2	YDR112W	SUT1	P53032	299 aa	Known RBP	4.78	□□□□□ -1.64
IRC2	YDR112W	ATG1	P53104	897 aa		4.78	□□□□□ -1.64
IRC2	YDR112W	NAM8	Q00539	523 aa	Known RBP	4.78	□□□□□ -1.64
IRC2	YDR112W	YMR265C	Q03508	461 aa	Known RBP	4.78	□□□□□ -1.64
IRC2	YDR112W	YML020W	Q03722	664 aa		4.78	□□□□□ -1.64
IRC2	YDR112W	STB3	Q12427	513 aa		4.78	□□□□□ -1.64
IRC2	YDR112W	LEU1	P07264	779 aa	Known RBP	4.77	□□□□□ -1.65
IRC2	YDR112W	BOI1	P38041	980 aa	Known RBP	4.77	□□□□□ -1.65
IRC2	YDR112W	SSF1	P38789	453 aa	Predicted RBP	4.77	□□□□□ -1.65
IRC2	YDR112W	FIR1	P40020	876 aa		4.77	□□□□□ -1.65
IRC2	YDR112W	RPP1A	P05318	106 aa	Predicted RBP	4.76	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 38 ms