RNA–Protein interactions for RNA: YDL150W

RPC53, Transcript of RNA polymerase III subunit C53, yeast

Gene RPC53, Length 1,269 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPC53	YDL150W	SLA1	P32790	1244 aa		8.12	□□□□□ -1.11
RPC53	YDL150W	TBS1	P38114	1094 aa		8.12	□□□□□ -1.11
RPC53	YDL150W	ATG32	P40458	529 aa		8.12	□□□□□ -1.11
RPC53	YDL150W	HDA3	Q06623	655 aa		8.12	□□□□□ -1.11
RPC53	YDL150W	TIF1	P10081	395 aa	Known RBP	8.1	□□□□□ -1.11
RPC53	YDL150W	SUM1	P46676	1062 aa		8.09	□□□□□ -1.11
RPC53	YDL150W	LYS5	P50113	272 aa		8.09	□□□□□ -1.11
RPC53	YDL150W	DPH6	Q12429	685 aa		8.09	□□□□□ -1.11
RPC53	YDL150W	UBP15	P50101	1230 aa		8.08	□□□□□ -1.12
RPC53	YDL150W	TY1A-DR3	Q12441	440 aa		8.08	□□□□□ -1.12
RPC53	YDL150W	ENO1	P00924	437 aa	Known RBP	8.07	□□□□□ -1.12
RPC53	YDL150W	PEP12	P32854	288 aa		8.06	□□□□□ -1.12
RPC53	YDL150W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	8.06	□□□□□ -1.12	not detected
RPC53	YDL150W	JJJ3	P47138	172 aa		8.05	□□□□□ -1.12
RPC53	YDL150W	RTG2	P32608	588 aa	Known RBP	8.04	□□□□□ -1.12
RPC53	YDL150W	UTP7	P40055	554 aa	Known RBP	8.04	□□□□□ -1.12
RPC53	YDL150W	CUZ1	P53899	274 aa		8.04	□□□□□ -1.12
RPC53	YDL150W	YPQ2	Q06328	317 aa		8.04	□□□□□ -1.12
RPC53	YDL150W	RPL34B	P40525	121 aa	Known RBP	8.03	□□□□□ -1.12
RPC53	YDL150W	AHP1	P38013	176 aa	Known RBP	8.02	□□□□□ -1.13
RPC53	YDL150W	AIM9	P40053	627 aa	Known RBP	8.02	□□□□□ -1.13
RPC53	YDL150W	YFL034W	P43564	1073 aa		8.02	□□□□□ -1.13
RPC53	YDL150W	JJJ2	P46997	583 aa		8.02	□□□□□ -1.13
RPC53	YDL150W	YPR204W	Q08995	1032 aa		8.02	□□□□□ -1.13
RPC53	YDL150W	SWI5	P08153	709 aa		8.01	□□□□□ -1.13
RPC53	YDL150W	DIT1	P21623	536 aa		7.99	□□□□□ -1.13
RPC53	YDL150W	SHM1	P37292	490 aa	Predicted RBP	7.99	□□□□□ -1.13
RPC53	YDL150W	MCM1	P11746	286 aa		7.98	□□□□□ -1.13
RPC53	YDL150W	IRE1	P32361	1115 aa		7.98	□□□□□ -1.13
RPC53	YDL150W	YDR461C-A	Q2V2P7	80 aa		7.98	□□□□□ -1.13
RPC53	YDL150W	RPS6A	P0CX37	236 aa	Known RBP	7.97	□□□□□ -1.13
RPC53	YDL150W	RPS6B	P0CX38	236 aa	Predicted RBP	7.97	□□□□□ -1.13
RPC53	YDL150W	SIS2	P36024	562 aa		7.97	□□□□□ -1.13
RPC53	YDL150W	ALA1	P40825	983 aa	Known RBP	7.97	□□□□□ -1.13
RPC53	YDL150W	TSC13	Q99190	310 aa		7.97	□□□□□ -1.13
RPC53	YDL150W	CEM1	P39525	442 aa		7.96	□□□□□ -1.14
RPC53	YDL150W	SYT1	Q06836	1226 aa		7.96	□□□□□ -1.14
RPC53	YDL150W	SGS1	P35187	1447 aa		7.95	□□□□□ -1.14
RPC53	YDL150W	RPS31	P05759	152 aa	Known RBP	7.95	□□□□□ -1.14
RPC53	YDL150W	YMR265C	Q03508	461 aa	Known RBP	7.95	□□□□□ -1.14
RPC53	YDL150W	NTH2	P35172	780 aa		7.94	□□□□□ -1.14
RPC53	YDL150W	DMA2	P53924	522 aa		7.94	□□□□□ -1.14
RPC53	YDL150W	PSH1	Q12161	406 aa		7.94	□□□□□ -1.14
RPC53	YDL150W	PDC6	P26263	563 aa	Known RBP	7.93	□□□□□ -1.14
RPC53	YDL150W	PDI1	P17967	522 aa	Known RBP	7.91	□□□□□ -1.14
RPC53	YDL150W	PHO87	P25360	923 aa		7.91	□□□□□ -1.14
RPC53	YDL150W	KRE33	P53914	1056 aa	Known RBP	7.91	□□□□□ -1.14
RPC53	YDL150W	LEU1	P07264	779 aa	Known RBP	7.89	□□□□□ -1.15
RPC53	YDL150W	UBP1	P25037	809 aa		7.89	□□□□□ -1.15
RPC53	YDL150W	ICP55	P40051	511 aa		7.89	□□□□□ -1.15
RPC53	YDL150W	ACS2	P52910	683 aa	Known RBP	7.89	□□□□□ -1.15
RPC53	YDL150W	CYT1	P07143	309 aa		7.88	□□□□□ -1.15
RPC53	YDL150W	ADE12	P80210	433 aa	Known RBP	7.88	□□□□□ -1.15
RPC53	YDL150W	MTC5	Q03897	1148 aa		7.88	□□□□□ -1.15
RPC53	YDL150W	SPT6	P23615	1451 aa	Known RBP	7.87	□□□□□ -1.15
RPC53	YDL150W	HAP4	P14064	554 aa		7.87	□□□□□ -1.15
RPC53	YDL150W	YNL165W	P53891	406 aa		7.87	□□□□□ -1.15
RPC53	YDL150W	GAS4	Q08271	471 aa		7.87	□□□□□ -1.15
RPC53	YDL150W	PHM7	Q12252	991 aa		7.87	□□□□□ -1.15
RPC53	YDL150W	HSL1	P34244	1518 aa		7.87	□□□□□ -1.15
RPC53	YDL150W	YFL066C	P43538	392 aa		7.86	□□□□□ -1.15
RPC53	YDL150W	ALD2	P47771	506 aa		7.86	□□□□□ -1.15
RPC53	YDL150W	AI1	P03875	834 aa		7.85	□□□□□ -1.15
RPC53	YDL150W	GAL2	P13181	574 aa		7.85	□□□□□ -1.15
RPC53	YDL150W	TTI1	P36097	1038 aa		7.85	□□□□□ -1.15
RPC53	YDL150W	MRPL16	P38064	232 aa		7.85	□□□□□ -1.15
RPC53	YDL150W	SPA2	P23201	1466 aa	Known RBP	7.85	□□□□□ -1.15
RPC53	YDL150W	KTR7	P40504	517 aa		7.84	□□□□□ -1.15
RPC53	YDL150W	SPR3	P41901	512 aa		7.84	□□□□□ -1.15
RPC53	YDL150W	FPS1	P23900	669 aa		7.82	□□□□□ -1.16
RPC53	YDL150W	ROM1	P53046	1155 aa		7.82	□□□□□ -1.16
RPC53	YDL150W	UTP4	Q06679	776 aa	Known RBP	7.82	□□□□□ -1.16
RPC53	YDL150W	STB3	Q12427	513 aa		7.82	□□□□□ -1.16
RPC53	YDL150W	ECM5	Q03214	1411 aa		7.81	□□□□□ -1.16
RPC53	YDL150W	MLF3	P32047	452 aa		7.81	□□□□□ -1.16
RPC53	YDL150W	NGR1	P32831	672 aa	Known RBP	7.81	□□□□□ -1.16
RPC53	YDL150W	MDJ1	P35191	511 aa		7.81	□□□□□ -1.16
RPC53	YDL150W	TGL4	P36165	910 aa		7.81	□□□□□ -1.16
RPC53	YDL150W	GPM1	P00950	247 aa	Known RBP	7.8	□□□□□ -1.16
RPC53	YDL150W	RGP1	P16664	663 aa		7.8	□□□□□ -1.16
RPC53	YDL150W	YTA6	P40328	754 aa		7.8	□□□□□ -1.16
RPC53	YDL150W	NSG2	P53898	299 aa		7.8	□□□□□ -1.16
RPC53	YDL150W	PUS1	Q12211	544 aa	Known RBP	7.8	□□□□□ -1.16
RPC53	YDL150W	RPP1A	P05318	106 aa	Predicted RBP	7.79	□□□□□ -1.16
RPC53	YDL150W	HXT5	P38695	592 aa		7.79	□□□□□ -1.16
RPC53	YDL150W	Q0182	Q9ZZW1	134 aa		7.79	□□□□□ -1.16
RPC53	YDL150W	SCD5	P34758	872 aa		7.78	□□□□□ -1.16
RPC53	YDL150W	THI72	Q08579	599 aa		7.78	□□□□□ -1.16
RPC53	YDL150W	MSC7	P38694	644 aa		7.77	□□□□□ -1.17
RPC53	YDL150W	TY1A-DR2	Q03964	440 aa	Known RBP	7.77	□□□□□ -1.17
RPC53	YDL150W	KNS1	P32350	737 aa	Predicted RBP	7.75	□□□□□ -1.17
RPC53	YDL150W	SKP1	P52286	194 aa		7.75	□□□□□ -1.17
RPC53	YDL150W	VAN1	P23642	535 aa		7.74	□□□□□ -1.17
RPC53	YDL150W	PDC5	P16467	563 aa	Known RBP	7.73	□□□□□ -1.17
RPC53	YDL150W	BUD4	P47136	1447 aa		7.72	□□□□□ -1.17
RPC53	YDL150W	SBE2	P42223	864 aa	Known RBP	7.72	□□□□□ -1.17
RPC53	YDL150W	ECM23	Q02710	187 aa		7.72	□□□□□ -1.17
RPC53	YDL150W	TRS33	Q99394	268 aa		7.72	□□□□□ -1.17
RPC53	YDL150W	PUP1	P25043	261 aa		7.71	□□□□□ -1.18
RPC53	YDL150W	CPS1	P27614	576 aa		7.71	□□□□□ -1.18

Retrieved 100 of 5,963 RNA–protein pairs in 24.7 ms