RNA–Protein interactions for RNA: YBR229C

ROT2, Transcript of Glucosidase II catalytic subunit, yeastyeast

Gene ROT2, Length 2,865 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROT2YBR229C NUP133P36161 1157 aa5.78□□□□□ -1.48
ROT2YBR229C RKM3P38222 552 aa5.78□□□□□ -1.48
ROT2YBR229C UBP12P39538 1254 aa5.78□□□□□ -1.48
ROT2YBR229C MEC3Q02574 474 aa5.78□□□□□ -1.48
ROT2YBR229C RVS167P39743 482 aaKnown RBP5.78□□□□□ -1.48
ROT2YBR229C CTR9P89105 1077 aa5.78□□□□□ -1.48
ROT2YBR229C BRE1Q07457 700 aaKnown RBP5.78□□□□□ -1.48
ROT2YBR229C AAP1P37898 856 aaKnown RBP5.77□□□□□ -1.49
ROT2YBR229C RSM25P40496 264 aa5.77□□□□□ -1.49
ROT2YBR229C FPR4Q06205 392 aaPredicted RBP5.77□□□□□ -1.49
ROT2YBR229C RIM20Q12033 661 aa5.77□□□□□ -1.49
ROT2YBR229C SET1P38827 1080 aaKnown RBP5.77□□□□□ -1.49
ROT2YBR229C PDR18P53756 1333 aa5.77□□□□□ -1.49
ROT2YBR229C OSM1P21375 501 aaKnown RBP5.77□□□□□ -1.49
ROT2YBR229C AIM9P40053 627 aaKnown RBP5.77□□□□□ -1.49
ROT2YBR229C MLC1P53141 149 aa5.77□□□□□ -1.49
ROT2YBR229C LPD1P09624 499 aaKnown RBP5.76□□□□□ -1.49
ROT2YBR229C MIF2P35201 549 aa5.76□□□□□ -1.49
ROT2YBR229C ADE16P54113 591 aaKnown RBP5.76□□□□□ -1.49
ROT2YBR229C YGL242CP53066 181 aa5.75□□□□□ -1.49
ROT2YBR229C ELM1P32801 640 aa5.75□□□□□ -1.49
ROT2YBR229C MRPS35P53292 345 aa5.75□□□□□ -1.49
ROT2YBR229C RMT2Q03305 412 aa5.75□□□□□ -1.49
ROT2YBR229C PEX19Q07418 342 aa5.75□□□□□ -1.49
ROT2YBR229C RPL19AP0CX82 189 aaKnown RBP5.74□□□□□ -1.49
ROT2YBR229C RPL19BP0CX83 189 aaPredicted RBP5.74□□□□□ -1.49
ROT2YBR229C SPO22P40511 975 aa5.74□□□□□ -1.49
ROT2YBR229C YGL081WP53156 320 aa5.74□□□□□ -1.49
ROT2YBR229C ALO1P54783 526 aaKnown RBP5.74□□□□□ -1.49
ROT2YBR229C KTR3P38130 404 aaPredicted RBP5.73□□□□□ -1.49
ROT2YBR229C KRI1P42846 591 aaKnown RBP5.73□□□□□ -1.49
ROT2YBR229C RMD1Q03441 430 aa5.73□□□□□ -1.49
ROT2YBR229C YLR271WQ06152 274 aa5.73□□□□□ -1.49
ROT2YBR229C APC11Q12157 165 aa5.73□□□□□ -1.49
ROT2YBR229C KTR1P27810 393 aaKnown RBP5.73□□□□□ -1.49
ROT2YBR229C MDG1P53885 366 aa5.73□□□□□ -1.49
ROT2YBR229C SSP2Q08646 371 aa5.73□□□□□ -1.49
ROT2YBR229C TAF13P11747 167 aa5.73□□□□□ -1.49
ROT2YBR229C MPE1P35728 441 aaKnown RBP5.73□□□□□ -1.49
ROT2YBR229C MIC60P36112 540 aa5.73□□□□□ -1.49
ROT2YBR229C CWH41P53008 833 aa5.73□□□□□ -1.49
ROT2YBR229C NOP53Q12080 455 aaKnown RBP5.73□□□□□ -1.49
ROT2YBR229C TPM1P17536 199 aaKnown RBP5.72□□□□□ -1.49
ROT2YBR229C MCM2P29469 868 aa5.72□□□□□ -1.49
ROT2YBR229C YBP2P53169 641 aa5.72□□□□□ -1.49
ROT2YBR229C VPS64Q03944 604 aa5.72□□□□□ -1.49
ROT2YBR229C ETT1Q08421 412 aaKnown RBP5.72□□□□□ -1.49
ROT2YBR229C PRX1P34227 261 aaKnown RBP5.72□□□□□ -1.49
ROT2YBR229C TTI1P36097 1038 aa5.72□□□□□ -1.49
ROT2YBR229C IES2P40154 320 aa5.72□□□□□ -1.49
ROT2YBR229C CCT5P40413 562 aaKnown RBP5.72□□□□□ -1.49
ROT2YBR229C PEX14P53112 341 aa5.72□□□□□ -1.49
ROT2YBR229C ATG13Q06628 738 aa5.72□□□□□ -1.49
ROT2YBR229C MTC5Q03897 1148 aa5.71□□□□□ -1.5
ROT2YBR229C YPR204WQ08995 1032 aa5.71□□□□□ -1.5
ROT2YBR229C NOP58Q12499 511 aaKnown RBP5.71□□□□□ -1.5
ROT2YBR229C RIM15P43565 1770 aa5.71□□□□□ -1.5
ROT2YBR229C PSK2Q08217 1101 aa5.71□□□□□ -1.5
ROT2YBR229C YPL150WQ12152 901 aa5.71□□□□□ -1.5
ROT2YBR229C MBR1P23493 339 aa5.7□□□□□ -1.5
ROT2YBR229C APL2P36000 726 aaPredicted RBP5.7□□□□□ -1.5
ROT2YBR229C DID4P36108 232 aa5.7□□□□□ -1.5
ROT2YBR229C CTF18P49956 741 aa5.7□□□□□ -1.5
ROT2YBR229C UTP10P42945 1769 aaKnown RBP5.7□□□□□ -1.5
ROT2YBR229C YKL133CP36066 463 aa5.7□□□□□ -1.5
ROT2YBR229C OSH3P38713 996 aaKnown RBP5.7□□□□□ -1.5
ROT2YBR229C HXT10P43581 546 aa5.7□□□□□ -1.5
ROT2YBR229C FRK1Q03002 865 aaPredicted RBP5.7□□□□□ -1.5
ROT2YBR229C PSH1Q12161 406 aa5.7□□□□□ -1.5
ROT2YBR229C GYP5Q12344 894 aa5.7□□□□□ -1.5
ROT2YBR229C ARG8P18544 423 aa5.69□□□□□ -1.5
ROT2YBR229C STM1P39015 273 aaKnown RBP5.69□□□□□ -1.5
ROT2YBR229C EPS1P40557 701 aa5.69□□□□□ -1.5
ROT2YBR229C ESC2Q06340 456 aa5.69□□□□□ -1.5
ROT2YBR229C SUP35P05453 685 aaKnown RBP5.69□□□□□ -1.5
ROT2YBR229C FRS2P15625 503 aaKnown RBP5.69□□□□□ -1.5
ROT2YBR229C REB1P21538 810 aa5.69□□□□□ -1.5
ROT2YBR229C MRPL10P36520 322 aa5.69□□□□□ -1.5
ROT2YBR229C NPR3P38742 1146 aa5.69□□□□□ -1.5
ROT2YBR229C PIB2P53191 635 aa5.69□□□□□ -1.5
ROT2YBR229C ELG1Q12050 791 aa5.69□□□□□ -1.5
ROT2YBR229C TSR3Q12094 313 aaKnown RBP5.69□□□□□ -1.5
ROT2YBR229C PHM7Q12252 991 aa5.69□□□□□ -1.5
ROT2YBR229C CPA2P03965 1118 aaKnown RBP5.69□□□□□ -1.5
ROT2YBR229C YHL017WP38745 532 aa5.69□□□□□ -1.5
ROT2YBR229C ENT1Q12518 454 aa5.69□□□□□ -1.5
ROT2YBR229C DDP1Q99321 188 aaKnown RBP5.69□□□□□ -1.5
ROT2YBR229C SSK22P25390 1331 aaPredicted RBP5.68□□□□□ -1.5
ROT2YBR229C OPI1P21957 404 aa5.68□□□□□ -1.5
ROT2YBR229C STU2P46675 888 aa5.68□□□□□ -1.5
ROT2YBR229C TUM1Q08686 304 aaKnown RBP5.67□□□□□ -1.5
ROT2YBR229C CYC8P14922 966 aa5.67□□□□□ -1.5
ROT2YBR229C PBY1P38254 753 aa5.67□□□□□ -1.5
ROT2YBR229C ECM23Q02710 187 aa5.67□□□□□ -1.5
ROT2YBR229C PKH1Q03407 766 aa5.67□□□□□ -1.5
ROT2YBR229C SAC3P46674 1301 aa5.67□□□□□ -1.5
ROT2YBR229C DCD1P06773 312 aa5.66□□□□□ -1.5
ROT2YBR229C MATALPHA2P0CY08 210 aa5.66□□□□□ -1.5
ROT2YBR229C HMLALPHA2P0CY09 210 aa5.66□□□□□ -1.5
ROT2YBR229C ATE1P16639 503 aa5.66□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 35 ms