RNA–Protein interactions for RNA: YBR200W

BEM1, Transcript of Protein containing SH3-domains, yeastyeast

Gene BEM1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BEM1YBR200W RRP15Q06511 250 aaPredicted RBP8.8□□□□□ -1
BEM1YBR200W KEX1P09620 729 aa8.79□□□□□ -1
BEM1YBR200W PRD1P25375 712 aa8.79□□□□□ -1
BEM1YBR200W CSE4P36012 229 aa8.79□□□□□ -1
BEM1YBR200W PBY1P38254 753 aa8.79□□□□□ -1
BEM1YBR200W NPA3P47122 385 aa8.79□□□□□ -1
BEM1YBR200W UTP13Q05946 817 aaKnown RBP8.79□□□□□ -1
BEM1YBR200W TY4B-HP0C2J7 1802 aa8.79□□□□□ -1
BEM1YBR200W TY4B-JP47024 1803 aa8.79□□□□□ -1
BEM1YBR200W UBP1P25037 809 aa8.78□□□□□ -1
BEM1YBR200W CPS1P27614 576 aa8.78□□□□□ -1
BEM1YBR200W SWI3P32591 825 aa8.78□□□□□ -1
BEM1YBR200W DOT5P40553 215 aa8.78□□□□□ -1
BEM1YBR200W BMS1Q08965 1183 aaKnown RBP8.78□□□□□ -1
BEM1YBR200W PSK1P31374 1356 aa8.78□□□□□ -1
BEM1YBR200W URB1P34241 1764 aaKnown RBP8.77□□□□□ -1.01
BEM1YBR200W PRP5P21372 849 aaPredicted RBP8.77□□□□□ -1.01
BEM1YBR200W LYS4P49367 693 aaPredicted RBP8.77□□□□□ -1.01
BEM1YBR200W KRE33P53914 1056 aaKnown RBP8.77□□□□□ -1.01
BEM1YBR200W RCM1P53972 490 aa8.77□□□□□ -1.01
BEM1YBR200W YVC1Q12324 675 aa8.77□□□□□ -1.01
BEM1YBR200W GCR2Q01722 534 aa8.76□□□□□ -1.01
BEM1YBR200W VPS20Q04272 221 aa8.76□□□□□ -1.01
BEM1YBR200W NKP2Q06162 153 aa8.76□□□□□ -1.01
BEM1YBR200W SSA1P10591 642 aaKnown RBP8.75□□□□□ -1.01
BEM1YBR200W SSA2P10592 639 aaKnown RBP8.75□□□□□ -1.01
BEM1YBR200W RAD51P25454 400 aa8.75□□□□□ -1.01
BEM1YBR200W RRP14P36080 434 aaKnown RBP8.75□□□□□ -1.01
BEM1YBR200W PEA2P40091 420 aa8.75□□□□□ -1.01
BEM1YBR200W VPS72Q03388 795 aa8.75□□□□□ -1.01
BEM1YBR200W TRP5P00931 707 aaKnown RBP8.75□□□□□ -1.01
BEM1YBR200W BIK1P11709 440 aa8.75□□□□□ -1.01
BEM1YBR200W KAR2P16474 682 aaKnown RBP8.75□□□□□ -1.01
BEM1YBR200W CDC11P32458 415 aa8.75□□□□□ -1.01
BEM1YBR200W MSB3P48566 633 aaPredicted RBP8.75□□□□□ -1.01
BEM1YBR200W MRS2Q01926 470 aa8.75□□□□□ -1.01
BEM1YBR200W TAF8Q03750 510 aa8.75□□□□□ -1.01
BEM1YBR200W ERV41Q04651 352 aa8.75□□□□□ -1.01
BEM1YBR200W HRQ1Q05549 1077 aa8.75□□□□□ -1.01
BEM1YBR200W GIN4Q12263 1142 aa8.75□□□□□ -1.01
BEM1YBR200W PPH3P32345 308 aa8.74□□□□□ -1.01
BEM1YBR200W MFT1P33441 392 aaKnown RBP8.74□□□□□ -1.01
BEM1YBR200W MPE1P35728 441 aaKnown RBP8.74□□□□□ -1.01
BEM1YBR200W MRPL10P36520 322 aa8.74□□□□□ -1.01
BEM1YBR200W NPR2P39923 615 aa8.74□□□□□ -1.01
BEM1YBR200W HYR1P40581 163 aaKnown RBP8.74□□□□□ -1.01
BEM1YBR200W RTT109Q07794 436 aa8.74□□□□□ -1.01
BEM1YBR200W RNR2P09938 399 aaKnown RBP8.73□□□□□ -1.01
BEM1YBR200W TIM50Q02776 476 aa8.73□□□□□ -1.01
BEM1YBR200W YMR124WP39523 943 aaKnown RBP8.72□□□□□ -1.01
BEM1YBR200W RSC8P43609 557 aaKnown RBP8.72□□□□□ -1.01
BEM1YBR200W CWH41P53008 833 aa8.72□□□□□ -1.01
BEM1YBR200W SUB1P54000 292 aaKnown RBP8.72□□□□□ -1.01
BEM1YBR200W APC11Q12157 165 aa8.72□□□□□ -1.01
BEM1YBR200W YOL087CQ99247 1116 aa8.72□□□□□ -1.01
BEM1YBR200W LYS2P07702 1392 aa8.72□□□□□ -1.01
BEM1YBR200W TAF13P11747 167 aa8.72□□□□□ -1.01
BEM1YBR200W DID4P36108 232 aa8.72□□□□□ -1.01
BEM1YBR200W UGA2P38067 497 aa8.72□□□□□ -1.01
BEM1YBR200W BRN1P38170 754 aa8.72□□□□□ -1.01
BEM1YBR200W IES2P40154 320 aa8.72□□□□□ -1.01
BEM1YBR200W ALD3P54114 506 aa8.72□□□□□ -1.01
BEM1YBR200W FOX2Q02207 900 aaKnown RBP8.72□□□□□ -1.01
BEM1YBR200W YLL054CQ12244 843 aa8.72□□□□□ -1.01
BEM1YBR200W VID30P53076 958 aa8.71□□□□□ -1.02
BEM1YBR200W FKS3Q04952 1785 aa8.7□□□□□ -1.02
BEM1YBR200W YGL140CP53120 1219 aa8.7□□□□□ -1.02
BEM1YBR200W PAP2P53632 584 aaKnown RBP8.7□□□□□ -1.02
BEM1YBR200W HSC82P15108 705 aaKnown RBP8.69□□□□□ -1.02
BEM1YBR200W RTT107P38850 1070 aa8.69□□□□□ -1.02
BEM1YBR200W SML1Q04964 104 aa8.69□□□□□ -1.02
BEM1YBR200W MRC1P25588 1096 aa8.69□□□□□ -1.02
BEM1YBR200W MNR2P35724 969 aa8.69□□□□□ -1.02
BEM1YBR200W RFC1P38630 861 aaKnown RBP8.69□□□□□ -1.02
BEM1YBR200W NAB3P38996 802 aaKnown RBP RIP-Chip data8.69□□□□□ -1.02not detected
BEM1YBR200W ILV3P39522 585 aaKnown RBP8.69□□□□□ -1.02
BEM1YBR200W HXT13P39924 564 aa8.69□□□□□ -1.02
BEM1YBR200W RPC82P32349 654 aa8.68□□□□□ -1.02
BEM1YBR200W VPS41P38959 992 aa8.68□□□□□ -1.02
BEM1YBR200W GTT3P39996 337 aa8.68□□□□□ -1.02
BEM1YBR200W CTH1P47976 325 aa8.68□□□□□ -1.02
BEM1YBR200W VPS30Q02948 557 aa8.68□□□□□ -1.02
BEM1YBR200W SES1P07284 462 aaKnown RBP8.67□□□□□ -1.02
BEM1YBR200W YMR102CQ03177 834 aa8.67□□□□□ -1.02
BEM1YBR200W PEX19Q07418 342 aa8.66□□□□□ -1.02
BEM1YBR200W YRF1-3P0CX14 1859 aa8.66□□□□□ -1.02
BEM1YBR200W YRF1-7P0CX15 1859 aa8.66□□□□□ -1.02
BEM1YBR200W YRF1-6P53819 1859 aa8.66□□□□□ -1.02
BEM1YBR200W ALD2P47771 506 aa8.65□□□□□ -1.02
BEM1YBR200W PRP31P49704 494 aaPredicted RBP8.65□□□□□ -1.02
BEM1YBR200W AUS1Q08409 1394 aa8.65□□□□□ -1.02
BEM1YBR200W KAR3P17119 729 aa8.65□□□□□ -1.03
BEM1YBR200W YJL181WP46987 611 aa8.65□□□□□ -1.03
BEM1YBR200W HXT17P53631 564 aa8.65□□□□□ -1.03
BEM1YBR200W SSL2Q00578 843 aa8.65□□□□□ -1.03
BEM1YBR200W TLG2Q08144 397 aa8.65□□□□□ -1.03
BEM1YBR200W NOP56Q12460 504 aaKnown RBP RIP-Chip data8.65□□□□□ -1.03not detected
BEM1YBR200W ADE6P38972 1358 aaKnown RBP8.65□□□□□ -1.03
BEM1YBR200W MSH1P25846 959 aa8.64□□□□□ -1.03
BEM1YBR200W GDT1P38301 280 aaPredicted RBP8.64□□□□□ -1.03
Retrieved 100 of 5,963 RNA–protein pairs in 14 ms