RNA–Protein interactions for RNA: YBR055C

PRP6, Transcript of Splicing factor, yeastyeast

Gene PRP6, Length 2,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP6YBR055C SPR3P41901 512 aa3.31□□□□□ -1.88
PRP6YBR055C HXT10P43581 546 aa3.31□□□□□ -1.88
PRP6YBR055C DOS2P54858 310 aa3.31□□□□□ -1.88
PRP6YBR055C FOX2Q02207 900 aaKnown RBP3.31□□□□□ -1.88
PRP6YBR055C TRS120Q04183 1289 aa3.31□□□□□ -1.88
PRP6YBR055C SPR28Q04921 423 aa3.31□□□□□ -1.88
PRP6YBR055C PAT1P25644 796 aaKnown RBP3.31□□□□□ -1.88
PRP6YBR055C SEC61P32915 480 aa3.31□□□□□ -1.88
PRP6YBR055C NMD2P38798 1089 aaKnown RBP3.31□□□□□ -1.88
PRP6YBR055C YAF9P53930 226 aa3.31□□□□□ -1.88
PRP6YBR055C ALD3P54114 506 aa3.31□□□□□ -1.88
PRP6YBR055C ATG20Q07528 640 aa3.31□□□□□ -1.88
PRP6YBR055C LDB19Q12502 818 aa3.31□□□□□ -1.88
PRP6YBR055C RPS6AP0CX37 236 aaKnown RBP3.3□□□□□ -1.88
PRP6YBR055C RPS6BP0CX38 236 aaPredicted RBP3.3□□□□□ -1.88
PRP6YBR055C PEP7P32609 515 aa3.3□□□□□ -1.88
PRP6YBR055C ISC10P32645 267 aa3.3□□□□□ -1.88
PRP6YBR055C RNH70P53331 553 aa3.3□□□□□ -1.88
PRP6YBR055C YDL129WQ07555 291 aa3.3□□□□□ -1.88
PRP6YBR055C GPI13Q07830 1017 aa3.3□□□□□ -1.88
PRP6YBR055C RPB10P22139 70 aa3.3□□□□□ -1.88
PRP6YBR055C SRP40P32583 406 aaPredicted RBP3.3□□□□□ -1.88
PRP6YBR055C ELP4Q02884 456 aaKnown RBP3.3□□□□□ -1.88
PRP6YBR055C PRT1P06103 763 aaKnown RBP3.29□□□□□ -1.88
PRP6YBR055C UBP1P25037 809 aa3.29□□□□□ -1.88
PRP6YBR055C RRD1P40454 393 aaKnown RBP3.29□□□□□ -1.88
PRP6YBR055C SPT2P06843 333 aaPredicted RBP3.29□□□□□ -1.88
PRP6YBR055C PPG1P32838 368 aa3.29□□□□□ -1.88
PRP6YBR055C YBR197CP38306 217 aa3.29□□□□□ -1.88
PRP6YBR055C FAR11P53917 953 aa3.29□□□□□ -1.88
PRP6YBR055C YDR344CQ05510 147 aa3.29□□□□□ -1.88
PRP6YBR055C PHO4P07270 312 aaKnown RBP3.28□□□□□ -1.88
PRP6YBR055C NGR1P32831 672 aaKnown RBP3.28□□□□□ -1.88
PRP6YBR055C YKL091CP33324 310 aaKnown RBP3.28□□□□□ -1.88
PRP6YBR055C ARH1P48360 493 aa3.28□□□□□ -1.88
PRP6YBR055C SWI5P08153 709 aa3.28□□□□□ -1.88
PRP6YBR055C SPT16P32558 1035 aaKnown RBP3.28□□□□□ -1.88
PRP6YBR055C UFD2P54860 961 aa3.28□□□□□ -1.88
PRP6YBR055C VPS16Q03308 798 aa3.28□□□□□ -1.88
PRP6YBR055C BDS1Q08347 646 aa3.28□□□□□ -1.88
PRP6YBR055C UTR2P32623 467 aa3.28□□□□□ -1.89
PRP6YBR055C RPS26AP39938 119 aaKnown RBP3.28□□□□□ -1.89
PRP6YBR055C RPS26BP39939 119 aaKnown RBP3.28□□□□□ -1.89
PRP6YBR055C DAK2P43550 591 aa3.28□□□□□ -1.89
PRP6YBR055C SUT1P53032 299 aaKnown RBP3.28□□□□□ -1.89
PRP6YBR055C BNI4P53858 892 aa3.28□□□□□ -1.89
PRP6YBR055C NCR1Q12200 1170 aa3.28□□□□□ -1.89
PRP6YBR055C YPR015CQ12531 247 aa3.28□□□□□ -1.89
PRP6YBR055C TPD3P31383 635 aa3.27□□□□□ -1.89
PRP6YBR055C GCD6P32501 712 aaKnown RBP3.27□□□□□ -1.89
PRP6YBR055C PTC2P39966 464 aaKnown RBP3.27□□□□□ -1.89
PRP6YBR055C APP1P53933 587 aa3.27□□□□□ -1.89
PRP6YBR055C CAB1Q04430 367 aa3.27□□□□□ -1.89
PRP6YBR055C PIN2Q12057 282 aa3.27□□□□□ -1.89
PRP6YBR055C WRS1Q12109 432 aaKnown RBP3.27□□□□□ -1.89
PRP6YBR055C CLN2P20438 545 aa3.27□□□□□ -1.89
PRP6YBR055C KIP2P28743 706 aa3.27□□□□□ -1.89
PRP6YBR055C SAP30P38429 201 aa3.27□□□□□ -1.89
PRP6YBR055C IOC3P43596 787 aa3.27□□□□□ -1.89
PRP6YBR055C CWC24P53769 259 aa3.27□□□□□ -1.89
PRP6YBR055C DAT1P13483 248 aaKnown RBP3.26□□□□□ -1.89
PRP6YBR055C CIT2P08679 460 aa3.26□□□□□ -1.89
PRP6YBR055C TBS1P38114 1094 aa3.26□□□□□ -1.89
PRP6YBR055C RMD1Q03441 430 aa3.26□□□□□ -1.89
PRP6YBR055C ESF1Q06344 628 aaKnown RBP3.26□□□□□ -1.89
PRP6YBR055C APC11Q12157 165 aa3.26□□□□□ -1.89
PRP6YBR055C PET112P33893 541 aa3.25□□□□□ -1.89
PRP6YBR055C SPT23P35210 1082 aa3.25□□□□□ -1.89
PRP6YBR055C RRP14P36080 434 aaKnown RBP3.25□□□□□ -1.89
PRP6YBR055C OSW7P43611 510 aa3.25□□□□□ -1.89
PRP6YBR055C SSF2Q12153 453 aaPredicted RBP3.25□□□□□ -1.89
PRP6YBR055C SAM37P50110 327 aa3.25□□□□□ -1.89
PRP6YBR055C NSE3Q05541 303 aa3.25□□□□□ -1.89
PRP6YBR055C OXR1Q08952 273 aa3.25□□□□□ -1.89
PRP6YBR055C MOD5P07884 428 aa3.24□□□□□ -1.89
PRP6YBR055C MKS1P34072 584 aa3.24□□□□□ -1.89
PRP6YBR055C VPS35P34110 944 aa3.24□□□□□ -1.89
PRP6YBR055C RTT106P40161 455 aa3.24□□□□□ -1.89
PRP6YBR055C ALG12P53730 551 aa3.24□□□□□ -1.89
PRP6YBR055C ISU1Q03020 165 aa3.24□□□□□ -1.89
PRP6YBR055C CDC53Q12018 815 aaKnown RBP3.24□□□□□ -1.89
PRP6YBR055C YNL011CP53980 444 aa3.24□□□□□ -1.89
PRP6YBR055C CDC55Q00362 526 aa3.24□□□□□ -1.89
PRP6YBR055C CYC8P14922 966 aa3.23□□□□□ -1.89
PRP6YBR055C MRPL33P20084 86 aa3.23□□□□□ -1.89
PRP6YBR055C KTR2P33550 425 aa3.23□□□□□ -1.89
PRP6YBR055C EMW1P42842 904 aaKnown RBP3.23□□□□□ -1.89
PRP6YBR055C YGR122WP53272 402 aa3.23□□□□□ -1.89
PRP6YBR055C PUS5Q06244 254 aa3.23□□□□□ -1.89
PRP6YBR055C FBP26P32604 452 aa3.23□□□□□ -1.89
PRP6YBR055C CIC1P38779 376 aaKnown RBP3.23□□□□□ -1.89
PRP6YBR055C FPR3P38911 411 aaKnown RBP3.23□□□□□ -1.89
PRP6YBR055C UBP9P39967 754 aa3.23□□□□□ -1.89
PRP6YBR055C YJL049WP47048 450 aa3.23□□□□□ -1.89
PRP6YBR055C UBP3Q01477 912 aaKnown RBP RIP-Chip data3.23□□□□□ -1.89not detected
PRP6YBR055C TOS4Q06266 489 aa3.23□□□□□ -1.89
PRP6YBR055C NOC3Q07896 663 aaPredicted RBP3.23□□□□□ -1.89
PRP6YBR055C YOR131CQ12486 218 aa3.23□□□□□ -1.89
PRP6YBR055C STI1P15705 589 aaKnown RBP RIP-Chip data3.22□□□□□ -1.89not detected
PRP6YBR055C PBP2P38151 413 aaKnown RBP RIP-Chip data3.22□□□□□ -1.89not detected
Retrieved 100 of 5,963 RNA–protein pairs in 40.1 ms