RNA–Protein interactions for RNA: ENST00000641642.1

CASC19-247, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,107 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-247ENST00000641642 RAB3GAP2Q9H2M9 1393 aa15.35■□□□□ 0.05
CASC19-247ENST00000641642 TIE1P35590 1138 aa15.33■□□□□ 0.04
CASC19-247ENST00000641642 KIF3BO15066 747 aa15.31■□□□□ 0.04
CASC19-247ENST00000641642 SGIP1Q9BQI5 828 aa15.31■□□□□ 0.04
CASC19-247ENST00000641642 FAM135AQ9P2D6 1515 aa15.31■□□□□ 0.04
CASC19-247ENST00000641642 DEPDC5O75140 1603 aa15.3■□□□□ 0.04
CASC19-247ENST00000641642 POTEJP0CG39 1038 aa15.3■□□□□ 0.04
CASC19-247ENST00000641642 RNF17Q9BXT8 1623 aaKnown RBP15.3■□□□□ 0.04
CASC19-247ENST00000641642 UNC13BO14795 1591 aa15.29■□□□□ 0.04
CASC19-247ENST00000641642 KANK1Q14678 1352 aa15.29■□□□□ 0.04
CASC19-247ENST00000641642 KDM5DQ9BY66 1539 aa15.28■□□□□ 0.04
CASC19-247ENST00000641642 PRDM15P57071 1507 aaPredicted RBP15.27■□□□□ 0.03
CASC19-247ENST00000641642 NUP155O75694 1391 aa15.25■□□□□ 0.03
CASC19-247ENST00000641642 TRIM52Q96A61 297 aa15.25■□□□□ 0.03
CASC19-247ENST00000641642 VWDEQ8N2E2 1590 aa15.24■□□□□ 0.03
CASC19-247ENST00000641642 ARID4BQ4LE39 1312 aaPredicted RBP15.24■□□□□ 0.03
CASC19-247ENST00000641642 GGT6Q6P531 493 aa15.24■□□□□ 0.03
CASC19-247ENST00000641642 IQGAP3Q86VI3 1631 aa15.24■□□□□ 0.03
CASC19-247ENST00000641642 LMTK2Q8IWU2 1503 aa15.23■□□□□ 0.03
CASC19-247ENST00000641642 POTEFA5A3E0 1075 aa15.23■□□□□ 0.03
CASC19-247ENST00000641642 TTLL13PA6NNM8 815 aa15.23■□□□□ 0.03
CASC19-247ENST00000641642 FBXO3Q9UK99 471 aa15.23■□□□□ 0.03
CASC19-247ENST00000641642 MROH1Q8NDA8 1641 aa15.23■□□□□ 0.03
CASC19-247ENST00000641642 ZC3H13Q5T200 1668 aaKnown RBP15.22■□□□□ 0.03
CASC19-247ENST00000641642 FAM212AQ96EL1 285 aa15.22■□□□□ 0.03
CASC19-247ENST00000641642 CNTLNQ9NXG0 1405 aa15.22■□□□□ 0.03
CASC19-247ENST00000641642 PCDHB13Q9Y5F0 798 aa15.21■□□□□ 0.03
CASC19-247ENST00000641642 SIGLEC1Q9BZZ2 1709 aa15.2■□□□□ 0.02
CASC19-247ENST00000641642 WASHC2CQ9Y4E1 1318 aa15.2■□□□□ 0.02
CASC19-247ENST00000641642 MPHOSPH9Q99550 1183 aa15.2■□□□□ 0.02
CASC19-247ENST00000641642 ESF1Q9H501 851 aaKnown RBP15.19■□□□□ 0.02
CASC19-247ENST00000641642 PZPP20742 1482 aa15.19■□□□□ 0.02
CASC19-247ENST00000641642 CLSPNQ9HAW4 1339 aa15.18■□□□□ 0.02
CASC19-247ENST00000641642 MAMSTRQ6ZN01 415 aa15.18■□□□□ 0.02
CASC19-247ENST00000641642 RPRD2Q5VT52 1461 aaKnown RBP15.18■□□□□ 0.02
CASC19-247ENST00000641642 TET3O43151 1660 aa15.18■□□□□ 0.02
CASC19-247ENST00000641642 ARHGAP31Q2M1Z3 1444 aa15.17■□□□□ 0.02
CASC19-247ENST00000641642 ABCC3O15438 1527 aa15.17■□□□□ 0.02
CASC19-247ENST00000641642 DHX57Q6P158 1386 aaKnown RBP15.16■□□□□ 0.02
CASC19-247ENST00000641642 IFNL1Q8IU54 200 aa15.15■□□□□ 0.02
CASC19-247ENST00000641642 MROH2AA6NES4 1674 aa15.15■□□□□ 0.02
CASC19-247ENST00000641642 EFCAB6Q5THR3 1501 aa15.14■□□□□ 0.01
CASC19-247ENST00000641642 MLECQ14165 292 aa15.14■□□□□ 0.01
CASC19-247ENST00000641642 ADAMTSL3P82987 1691 aa15.13■□□□□ 0.01
CASC19-247ENST00000641642 CEP152O94986 1710 aa15.13■□□□□ 0.01
CASC19-247ENST00000641642 PKD2Q13563 968 aa15.13■□□□□ 0.01
CASC19-247ENST00000641642 IER5LQ5T953 404 aa15.12■□□□□ 0.01
CASC19-247ENST00000641642 CAMSAP1Q5T5Y3 1602 aa15.12■□□□□ 0.01
CASC19-247ENST00000641642 FER1L4A9Z1Z3 1794 aa15.11■□□□□ 0.01
CASC19-247ENST00000641642 ZMYM3Q14202 1370 aa15.11■□□□□ 0.01
CASC19-247ENST00000641642 CLTCQ00610 1675 aaKnown RBP15.1■□□□□ 0.01
CASC19-247ENST00000641642 TRIM35Q9UPQ4 493 aa15.1■□□□□ 0.01
CASC19-247ENST00000641642 COLQQ9Y215 455 aaPredicted RBP15.1■□□□□ 0.01
CASC19-247ENST00000641642 E9PCH4 1651 aa15.09■□□□□ 0.01
CASC19-247ENST00000641642 NPATQ14207 1427 aa15.09■□□□□ 0.01
CASC19-247ENST00000641642 PTPRTO14522 1441 aa15.09■□□□□ 0.01
CASC19-247ENST00000641642 CCER1Q8TC90 406 aaPredicted RBP15.08■□□□□ 0
CASC19-247ENST00000641642 ANKRD30BQ9BXX2 1392 aa15.08■□□□□ 0
CASC19-247ENST00000641642 SCUBE2Q9NQ36 999 aa15.07■□□□□ 0
CASC19-247ENST00000641642 VASPP50552 380 aaPredicted RBP15.06■□□□□ 0
CASC19-247ENST00000641642 NOS1P29475 1434 aa15.06■□□□□ 0
CASC19-247ENST00000641642 MADDQ8WXG6 1647 aa15.06■□□□□ 0
CASC19-247ENST00000641642 SLC52A1Q9NWF4 448 aa15.05■□□□□ -0
CASC19-247ENST00000641642 SETD1BQ9UPS6 1966 aaKnown RBP15.04■□□□□ -0
CASC19-247ENST00000641642 SPHKAPQ2M3C7 1700 aa15.04■□□□□ -0
CASC19-247ENST00000641642 SPATA31D1Q6ZQQ2 1576 aa15.04■□□□□ -0
CASC19-247ENST00000641642 TRPM2O94759 1503 aa15.04■□□□□ -0
CASC19-247ENST00000641642 RIMS1Q86UR5 1692 aaKnown RBP15.03■□□□□ -0
CASC19-247ENST00000641642 PREX1Q8TCU6 1659 aa15.03■□□□□ -0
CASC19-247ENST00000641642 ERVK-7P63135 1459 aa15.02■□□□□ -0
CASC19-247ENST00000641642 DCAF8Q5TAQ9 597 aa15.02■□□□□ -0
CASC19-247ENST00000641642 TMEM106CQ9BVX2 250 aa15.02■□□□□ -0
CASC19-247ENST00000641642 C3P01024 1663 aa15.02□□□□□ -0.01
CASC19-247ENST00000641642 CFAP65Q6ZU64 1925 aaKnown RBP15.02□□□□□ -0.01
CASC19-247ENST00000641642 PLA2R1Q13018 1463 aa15.01□□□□□ -0.01
CASC19-247ENST00000641642 CCDC144AA2RUR9 1427 aa15.01□□□□□ -0.01
CASC19-247ENST00000641642 TIMELESSQ9UNS1 1208 aa15.01□□□□□ -0.01
CASC19-247ENST00000641642 NEURL4Q96JN8 1562 aa15□□□□□ -0.01
CASC19-247ENST00000641642 POTEMA6NI47 508 aa15□□□□□ -0.01
CASC19-247ENST00000641642 SEC24BO95487 1268 aa15□□□□□ -0.01
CASC19-247ENST00000641642 PTPRMP28827 1452 aa15□□□□□ -0.01
CASC19-247ENST00000641642 PYGBP11216 843 aa14.99□□□□□ -0.01
CASC19-247ENST00000641642 TNRQ92752 1358 aa14.98□□□□□ -0.01
CASC19-247ENST00000641642 NLRP1Q9C000 1473 aa14.98□□□□□ -0.01
CASC19-247ENST00000641642 PIK3C2BO00750 1634 aa14.97□□□□□ -0.01
CASC19-247ENST00000641642 KDM4FA0A1W2PPD8 638 aa14.97□□□□□ -0.01
CASC19-247ENST00000641642 LCE2DQ5TA82 110 aaPredicted RBP14.97□□□□□ -0.01
CASC19-247ENST00000641642 FBXO31Q5XUX0 539 aaPredicted RBP14.97□□□□□ -0.01
CASC19-247ENST00000641642 SYNMO15061 1565 aa14.96□□□□□ -0.01
CASC19-247ENST00000641642 POTEGQ6S5H5 508 aa14.96□□□□□ -0.01
CASC19-247ENST00000641642 STAC3Q96MF2 364 aa14.96□□□□□ -0.01
CASC19-247ENST00000641642 CEBPAP49715 358 aaPredicted RBP14.95□□□□□ -0.02
CASC19-247ENST00000641642 KDM5AP29375 1690 aaKnown RBP14.95□□□□□ -0.02
CASC19-247ENST00000641642 KIF1BO60333 1816 aa14.94□□□□□ -0.02
CASC19-247ENST00000641642 IDI1Q13907 227 aa14.94□□□□□ -0.02
CASC19-247ENST00000641642 CLTCL1P53675 1640 aa14.93□□□□□ -0.02
CASC19-247ENST00000641642 ZEB1P37275 1124 aaPredicted RBP14.93□□□□□ -0.02
CASC19-247ENST00000641642 IRX5P78411 483 aaPredicted RBP14.93□□□□□ -0.02
CASC19-247ENST00000641642 SIN3AQ96ST3 1273 aa14.92□□□□□ -0.02
CASC19-247ENST00000641642 RPGRIP1LQ68CZ1 1315 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms