RNA–Protein interactions for RNA: ENST00000640773.1

KCNMA1-288, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5

Gene KCNMA1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-288ENST00000640773 IQGAP1P46940 1657 aa12.37□□□□□ -0.43
KCNMA1-288ENST00000640773 XIRP1Q702N8 1843 aaKnown RBP12.36□□□□□ -0.43
KCNMA1-288ENST00000640773 NEXMIFQ5QGS0 1516 aa12.36□□□□□ -0.43
KCNMA1-288ENST00000640773 RAB3GAP2Q9H2M9 1393 aa12.35□□□□□ -0.43
KCNMA1-288ENST00000640773 UHRF1BP1Q6BDS2 1440 aa12.35□□□□□ -0.43
KCNMA1-288ENST00000640773 BCANQ96GW7 911 aa12.35□□□□□ -0.43
KCNMA1-288ENST00000640773 PKNOX2Q96KN3 472 aa12.35□□□□□ -0.43
KCNMA1-288ENST00000640773 TNRQ92752 1358 aa12.34□□□□□ -0.43
KCNMA1-288ENST00000640773 ARID4BQ4LE39 1312 aaPredicted RBP12.34□□□□□ -0.43
KCNMA1-288ENST00000640773 CHD2O14647 1828 aaKnown RBP12.34□□□□□ -0.43
KCNMA1-288ENST00000640773 KANK1Q14678 1352 aa12.34□□□□□ -0.43
KCNMA1-288ENST00000640773 WASHC2CQ9Y4E1 1318 aa12.34□□□□□ -0.43
KCNMA1-288ENST00000640773 FKBP8Q14318 412 aa12.34□□□□□ -0.43
KCNMA1-288ENST00000640773 NWD1Q149M9 1564 aa12.33□□□□□ -0.44
KCNMA1-288ENST00000640773 SETBP1Q9Y6X0 1596 aa12.33□□□□□ -0.44
KCNMA1-288ENST00000640773 CEBPAP49715 358 aaPredicted RBP12.33□□□□□ -0.44
KCNMA1-288ENST00000640773 GGT6Q6P531 493 aa12.33□□□□□ -0.44
KCNMA1-288ENST00000640773 NRXN1Q9ULB1 1477 aa12.32□□□□□ -0.44
KCNMA1-288ENST00000640773 LTBP4Q8N2S1 1624 aa12.32□□□□□ -0.44
KCNMA1-288ENST00000640773 SPATA31E1Q6ZUB1 1445 aa12.32□□□□□ -0.44
KCNMA1-288ENST00000640773 FBXO31Q5XUX0 539 aaPredicted RBP12.31□□□□□ -0.44
KCNMA1-288ENST00000640773 NUP155O75694 1391 aa12.31□□□□□ -0.44
KCNMA1-288ENST00000640773 PRAG1Q86YV5 1406 aa12.31□□□□□ -0.44
KCNMA1-288ENST00000640773 DIP2AQ14689 1571 aa12.31□□□□□ -0.44
KCNMA1-288ENST00000640773 MLECQ14165 292 aa12.29□□□□□ -0.44
KCNMA1-288ENST00000640773 NEFLP07196 543 aa12.28□□□□□ -0.44
KCNMA1-288ENST00000640773 ANKRD30BQ9BXX2 1392 aa12.28□□□□□ -0.44
KCNMA1-288ENST00000640773 XRN1Q8IZH2 1706 aaKnown RBP12.28□□□□□ -0.44
KCNMA1-288ENST00000640773 KIAA1210Q9ULL0 1709 aa12.28□□□□□ -0.44
KCNMA1-288ENST00000640773 KNDC1Q76NI1 1749 aa12.27□□□□□ -0.44
KCNMA1-288ENST00000640773 SLC52A1Q9NWF4 448 aa12.25□□□□□ -0.45
KCNMA1-288ENST00000640773 LAMC1P11047 1609 aa12.25□□□□□ -0.45
KCNMA1-288ENST00000640773 TMEM2Q9UHN6 1383 aa12.24□□□□□ -0.45
KCNMA1-288ENST00000640773 ALKQ9UM73 1620 aa12.24□□□□□ -0.45
KCNMA1-288ENST00000640773 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.24□□□□□ -0.45
KCNMA1-288ENST00000640773 MYOM2P54296 1465 aa12.24□□□□□ -0.45
KCNMA1-288ENST00000640773 IQSEC2Q5JU85 1478 aa12.23□□□□□ -0.45
KCNMA1-288ENST00000640773 SCAF11Q99590 1463 aaKnown RBP12.23□□□□□ -0.45
KCNMA1-288ENST00000640773 IDI1Q13907 227 aa12.23□□□□□ -0.45
KCNMA1-288ENST00000640773 MPHOSPH9Q99550 1183 aa12.23□□□□□ -0.45
KCNMA1-288ENST00000640773 ADAMTS13Q76LX8 1427 aa12.2□□□□□ -0.46
KCNMA1-288ENST00000640773 ASXL1Q8IXJ9 1541 aa12.2□□□□□ -0.46
KCNMA1-288ENST00000640773 IL27Q8NEV9 243 aa12.2□□□□□ -0.46
KCNMA1-288ENST00000640773 DHX57Q6P158 1386 aaKnown RBP12.19□□□□□ -0.46
KCNMA1-288ENST00000640773 PLEKHG1Q9ULL1 1385 aa12.19□□□□□ -0.46
KCNMA1-288ENST00000640773 PKD2Q13563 968 aa12.19□□□□□ -0.46
KCNMA1-288ENST00000640773 PODXL2Q9NZ53 605 aa12.17□□□□□ -0.46
KCNMA1-288ENST00000640773 ADGRB1O14514 1584 aa12.17□□□□□ -0.46
KCNMA1-288ENST00000640773 PIK3C2GO75747 1445 aa12.17□□□□□ -0.46
KCNMA1-288ENST00000640773 NPHP4O75161 1426 aaPredicted RBP12.16□□□□□ -0.46
KCNMA1-288ENST00000640773 TRPM1Q7Z4N2 1603 aa12.16□□□□□ -0.46
KCNMA1-288ENST00000640773 CPS1P31327 1500 aa12.16□□□□□ -0.46
KCNMA1-288ENST00000640773 RIMS2Q9UQ26 1411 aa12.16□□□□□ -0.46
KCNMA1-288ENST00000640773 LTKP29376 864 aa12.16□□□□□ -0.46
KCNMA1-288ENST00000640773 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.16□□□□□ -0.46
KCNMA1-288ENST00000640773 PLEKHG5O94827 1062 aa12.15□□□□□ -0.46
KCNMA1-288ENST00000640773 ESF1Q9H501 851 aaKnown RBP12.15□□□□□ -0.46
KCNMA1-288ENST00000640773 THEMISQ8N1K5 641 aaPredicted RBP12.14□□□□□ -0.47
KCNMA1-288ENST00000640773 NOP58Q9Y2X3 529 aaKnown RBP12.14□□□□□ -0.47
KCNMA1-288ENST00000640773 RPGRIP1LQ68CZ1 1315 aa12.13□□□□□ -0.47
KCNMA1-288ENST00000640773 AEBP2Q6ZN18 517 aaPredicted RBP12.13□□□□□ -0.47
KCNMA1-288ENST00000640773 PIK3R4Q99570 1358 aa12.12□□□□□ -0.47
KCNMA1-288ENST00000640773 NKTRP30414 1462 aaKnown RBP12.12□□□□□ -0.47
KCNMA1-288ENST00000640773 NALCNQ8IZF0 1738 aa12.12□□□□□ -0.47
KCNMA1-288ENST00000640773 ARHGEF28Q8N1W1 1705 aaKnown RBP12.12□□□□□ -0.47
KCNMA1-288ENST00000640773 SLC4A1APQ9BWU0 796 aaKnown RBP12.12□□□□□ -0.47
KCNMA1-288ENST00000640773 CCDC144AA2RUR9 1427 aa12.12□□□□□ -0.47
KCNMA1-288ENST00000640773 TECPR2O15040 1411 aa12.12□□□□□ -0.47
KCNMA1-288ENST00000640773 RTL5Q5HYW3 569 aaPredicted RBP12.12□□□□□ -0.47
KCNMA1-288ENST00000640773 RTN4Q9NQC3 1192 aaKnown RBP12.11□□□□□ -0.47
KCNMA1-288ENST00000640773 HSPA2P54652 639 aa12.11□□□□□ -0.47
KCNMA1-288ENST00000640773 NBR1Q14596 966 aa12.11□□□□□ -0.47
KCNMA1-288ENST00000640773 PTPRUQ92729 1446 aa12.1□□□□□ -0.47
KCNMA1-288ENST00000640773 LRRC7Q96NW7 1537 aa12.1□□□□□ -0.47
KCNMA1-288ENST00000640773 C11orf95C9JLR9 678 aaPredicted RBP12.09□□□□□ -0.47
KCNMA1-288ENST00000640773 DLC1Q96QB1 1528 aa12.09□□□□□ -0.47
KCNMA1-288ENST00000640773 ADGRB2O60241 1585 aa12.09□□□□□ -0.47
KCNMA1-288ENST00000640773 NCOA3Q9Y6Q9 1424 aa12.09□□□□□ -0.47
KCNMA1-288ENST00000640773 NCKAP5LQ9HCH0 1330 aa12.09□□□□□ -0.47
KCNMA1-288ENST00000640773 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.08□□□□□ -0.48
KCNMA1-288ENST00000640773 GLIPR1L2Q4G1C9 344 aa12.07□□□□□ -0.48
KCNMA1-288ENST00000640773 FOXD1Q16676 465 aa12.07□□□□□ -0.48
KCNMA1-288ENST00000640773 PTCH1Q13635 1447 aa12.06□□□□□ -0.48
KCNMA1-288ENST00000640773 DMRT2Q9Y5R5 561 aa12.06□□□□□ -0.48
KCNMA1-288ENST00000640773 ANKLE2Q86XL3 938 aa12.06□□□□□ -0.48
KCNMA1-288ENST00000640773 STAC3Q96MF2 364 aa12.05□□□□□ -0.48
KCNMA1-288ENST00000640773 TBX22Q9Y458 520 aa12.04□□□□□ -0.48
KCNMA1-288ENST00000640773 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.03□□□□□ -0.48
KCNMA1-288ENST00000640773 FMN2Q9NZ56 1722 aa12.03□□□□□ -0.48
KCNMA1-288ENST00000640773 TOPAZ1Q8N9V7 1692 aa12.03□□□□□ -0.48
KCNMA1-288ENST00000640773 TRIM52Q96A61 297 aa12.02□□□□□ -0.48
KCNMA1-288ENST00000640773 USP32Q8NFA0 1604 aa12.02□□□□□ -0.49
KCNMA1-288ENST00000640773 METP08581 1390 aa12.02□□□□□ -0.49
KCNMA1-288ENST00000640773 RSPH6AQ9H0K4 717 aa12.02□□□□□ -0.49
KCNMA1-288ENST00000640773 WASHC2AQ641Q2 1341 aa12.01□□□□□ -0.49
KCNMA1-288ENST00000640773 CDC42BPGQ6DT37 1551 aa12.01□□□□□ -0.49
KCNMA1-288ENST00000640773 NHSL1Q5SYE7 1610 aa12□□□□□ -0.49
KCNMA1-288ENST00000640773 PAK3O75914 559 aaPredicted RBP12□□□□□ -0.49
KCNMA1-288ENST00000640773 TXNDC2Q86VQ3 553 aa12□□□□□ -0.49
KCNMA1-288ENST00000640773 GPRASP1Q5JY77 1395 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms