RNA–Protein interactions for RNA: ENST00000640577.1

SPIN3-242, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,436 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-242ENST00000640577 SCAF11Q99590 1463 aaKnown RBP21.03■□□□□ 0.96
SPIN3-242ENST00000640577 PER1O15534 1290 aaPredicted RBP21.03■□□□□ 0.96
SPIN3-242ENST00000640577 CHGAP10645 457 aaKnown RBP21.02■□□□□ 0.95
SPIN3-242ENST00000640577 TMF1P82094 1093 aa21.01■□□□□ 0.95
SPIN3-242ENST00000640577 NRXN1Q9ULB1 1477 aa21.01■□□□□ 0.95
SPIN3-242ENST00000640577 SYNMO15061 1565 aa21■□□□□ 0.95
SPIN3-242ENST00000640577 NOS1P29475 1434 aa21■□□□□ 0.95
SPIN3-242ENST00000640577 ZMYM4Q5VZL5 1548 aa21■□□□□ 0.95
SPIN3-242ENST00000640577 PPLO60437 1756 aa21■□□□□ 0.95
SPIN3-242ENST00000640577 PANK3Q9H999 370 aa20.97■□□□□ 0.95
SPIN3-242ENST00000640577 PIK3C2BO00750 1634 aa20.97■□□□□ 0.95
SPIN3-242ENST00000640577 KIF13AQ9H1H9 1805 aa20.96■□□□□ 0.95
SPIN3-242ENST00000640577 ZC3H13Q5T200 1668 aaKnown RBP20.96■□□□□ 0.95
SPIN3-242ENST00000640577 FKBP8Q14318 412 aa20.95■□□□□ 0.94
SPIN3-242ENST00000640577 PNISRQ8TF01 805 aaKnown RBP20.95■□□□□ 0.94
SPIN3-242ENST00000640577 PARD3Q8TEW0 1356 aa20.94■□□□□ 0.94
SPIN3-242ENST00000640577 RALBP1Q15311 655 aa20.94■□□□□ 0.94
SPIN3-242ENST00000640577 MYBBP1AQ9BQG0 1328 aaKnown RBP20.94■□□□□ 0.94
SPIN3-242ENST00000640577 ARHGAP31Q2M1Z3 1444 aa20.93■□□□□ 0.94
SPIN3-242ENST00000640577 PIK3C2GO75747 1445 aa20.92■□□□□ 0.94
SPIN3-242ENST00000640577 ZBED9Q6R2W3 1325 aa20.92■□□□□ 0.94
SPIN3-242ENST00000640577 KTN1Q86UP2 1357 aaKnown RBP20.92■□□□□ 0.94
SPIN3-242ENST00000640577 TMC1Q8TDI8 760 aa20.92■□□□□ 0.94
SPIN3-242ENST00000640577 MYOM1P52179 1685 aa20.91■□□□□ 0.94
SPIN3-242ENST00000640577 CC2D1BQ5T0F9 858 aaKnown RBP20.9■□□□□ 0.94
SPIN3-242ENST00000640577 MYO5BQ9ULV0 1848 aa20.9■□□□□ 0.94
SPIN3-242ENST00000640577 SENP3-EIF4A1A0A087X0R7 540 aa20.9■□□□□ 0.94
SPIN3-242ENST00000640577 NUTM2DQ5VT03 806 aaPredicted RBP20.9■□□□□ 0.94
SPIN3-242ENST00000640577 IDI1Q13907 227 aa20.89■□□□□ 0.94
SPIN3-242ENST00000640577 PREX1Q8TCU6 1659 aa20.89■□□□□ 0.93
SPIN3-242ENST00000640577 EIF3AQ14152 1382 aaKnown RBP20.89■□□□□ 0.93
SPIN3-242ENST00000640577 BRD4O60885 1362 aaPredicted RBP20.89■□□□□ 0.93
SPIN3-242ENST00000640577 BCANQ96GW7 911 aa20.88■□□□□ 0.93
SPIN3-242ENST00000640577 NEXMIFQ5QGS0 1516 aa20.87■□□□□ 0.93
SPIN3-242ENST00000640577 ADGRB1O14514 1584 aa20.87■□□□□ 0.93
SPIN3-242ENST00000640577 SETBP1Q9Y6X0 1596 aa20.87■□□□□ 0.93
SPIN3-242ENST00000640577 C14orf93Q9H972 538 aaKnown RBP20.87■□□□□ 0.93
SPIN3-242ENST00000640577 ERVK-7P63135 1459 aa20.87■□□□□ 0.93
SPIN3-242ENST00000640577 FBXO31Q5XUX0 539 aaPredicted RBP20.86■□□□□ 0.93
SPIN3-242ENST00000640577 TMEM132EQ6IEE7 984 aa20.86■□□□□ 0.93
SPIN3-242ENST00000640577 LRPPRCP42704 1394 aaKnown RBP20.85■□□□□ 0.93
SPIN3-242ENST00000640577 RPGRIP1LQ68CZ1 1315 aa20.85■□□□□ 0.93
SPIN3-242ENST00000640577 MYO3AQ8NEV4 1616 aa20.85■□□□□ 0.93
SPIN3-242ENST00000640577 KDM5AP29375 1690 aaKnown RBP20.85■□□□□ 0.93
SPIN3-242ENST00000640577 NLRP13Q86W25 1043 aa20.84■□□□□ 0.93
SPIN3-242ENST00000640577 REREQ9P2R6 1566 aa20.83■□□□□ 0.93
SPIN3-242ENST00000640577 TRAK1Q9UPV9 953 aa20.83■□□□□ 0.92
SPIN3-242ENST00000640577 CDCA8Q53HL2 280 aa20.82■□□□□ 0.92
SPIN3-242ENST00000640577 TMEM131LA2VDJ0 1609 aa20.81■□□□□ 0.92
SPIN3-242ENST00000640577 AGLP35573 1532 aa20.81■□□□□ 0.92
SPIN3-242ENST00000640577 SENP3Q9H4L4 574 aaPredicted RBP20.8■□□□□ 0.92
SPIN3-242ENST00000640577 NEFLP07196 543 aa20.8■□□□□ 0.92
SPIN3-242ENST00000640577 SLC52A1Q9NWF4 448 aa20.8■□□□□ 0.92
SPIN3-242ENST00000640577 CLTCQ00610 1675 aaKnown RBP20.8■□□□□ 0.92
SPIN3-242ENST00000640577 AMER1Q5JTC6 1135 aaPredicted RBP20.79■□□□□ 0.92
SPIN3-242ENST00000640577 QRICH2Q9H0J4 1663 aa20.78■□□□□ 0.92
SPIN3-242ENST00000640577 CENPJQ9HC77 1338 aaPredicted RBP20.78■□□□□ 0.92
SPIN3-242ENST00000640577 IRX6P78412 446 aaPredicted RBP20.77■□□□□ 0.92
SPIN3-242ENST00000640577 KNSTRNQ9Y448 316 aa20.77■□□□□ 0.92
SPIN3-242ENST00000640577 VGFO15240 615 aaPredicted RBP20.77■□□□□ 0.92
SPIN3-242ENST00000640577 MLECQ14165 292 aa20.77■□□□□ 0.92
SPIN3-242ENST00000640577 SBNO2Q9Y2G9 1366 aa20.76■□□□□ 0.91
SPIN3-242ENST00000640577 ARHGEF40Q8TER5 1519 aa20.76■□□□□ 0.91
SPIN3-242ENST00000640577 ASXL1Q8IXJ9 1541 aa20.74■□□□□ 0.91
SPIN3-242ENST00000640577 ARHGEF28Q8N1W1 1705 aaKnown RBP20.74■□□□□ 0.91
SPIN3-242ENST00000640577 CARD14Q9BXL6 1004 aa20.73■□□□□ 0.91
SPIN3-242ENST00000640577 ZFYVE9O95405 1425 aa20.72■□□□□ 0.91
SPIN3-242ENST00000640577 SMG6Q86US8 1419 aaKnown RBP20.7■□□□□ 0.9
SPIN3-242ENST00000640577 PPP2R1AP30153 589 aa20.7■□□□□ 0.9
SPIN3-242ENST00000640577 SLC24A1O60721 1099 aa20.69■□□□□ 0.9
SPIN3-242ENST00000640577 PPP6R1Q9UPN7 881 aa20.69■□□□□ 0.9
SPIN3-242ENST00000640577 SPATA31D1Q6ZQQ2 1576 aa20.67■□□□□ 0.9
SPIN3-242ENST00000640577 SALL2Q9Y467 1007 aaPredicted RBP20.66■□□□□ 0.9
SPIN3-242ENST00000640577 NPC1L1Q9UHC9 1359 aa20.66■□□□□ 0.9
SPIN3-242ENST00000640577 SLC12A5Q9H2X9 1139 aa20.65■□□□□ 0.9
SPIN3-242ENST00000640577 NUDCQ9Y266 331 aa20.65■□□□□ 0.9
SPIN3-242ENST00000640577 TULP4Q9NRJ4 1543 aa20.65■□□□□ 0.9
SPIN3-242ENST00000640577 STK26Q9P289 416 aa20.65■□□□□ 0.9
SPIN3-242ENST00000640577 SAFB2Q14151 953 aaKnown RBP eCLIP20.64■□□□□ 0.89
SPIN3-242ENST00000640577 A2ML1A8K2U0 1454 aa20.63■□□□□ 0.89
SPIN3-242ENST00000640577 BLMP54132 1417 aaPredicted RBP20.63■□□□□ 0.89
SPIN3-242ENST00000640577 STAG3Q9UJ98 1225 aa20.62■□□□□ 0.89
SPIN3-242ENST00000640577 ADAMTS8Q9UP79 889 aa20.61■□□□□ 0.89
SPIN3-242ENST00000640577 ALKQ9UM73 1620 aa20.61■□□□□ 0.89
SPIN3-242ENST00000640577 ZMYM3Q14202 1370 aa20.6■□□□□ 0.89
SPIN3-242ENST00000640577 PTPRMP28827 1452 aa20.6■□□□□ 0.89
SPIN3-242ENST00000640577 NSD3Q9BZ95 1437 aa20.58■□□□□ 0.89
SPIN3-242ENST00000640577 YTHDC2Q9H6S0 1430 aaKnown RBP20.58■□□□□ 0.88
SPIN3-242ENST00000640577 CABP2Q9NPB3 220 aa20.57■□□□□ 0.88
SPIN3-242ENST00000640577 INSRP06213 1382 aa20.56■□□□□ 0.88
SPIN3-242ENST00000640577 EVC2Q86UK5 1308 aa20.56■□□□□ 0.88
SPIN3-242ENST00000640577 RIMS2Q9UQ26 1411 aa20.55■□□□□ 0.88
SPIN3-242ENST00000640577 CDCA7LQ96GN5 454 aa20.55■□□□□ 0.88
SPIN3-242ENST00000640577 PRAM1Q96QH2 718 aa20.55■□□□□ 0.88
SPIN3-242ENST00000640577 SETD1AO15047 1707 aaKnown RBP20.55■□□□□ 0.88
SPIN3-242ENST00000640577 RNF123Q5XPI4 1314 aa20.54■□□□□ 0.88
SPIN3-242ENST00000640577 TSHZ2Q9NRE2 1034 aa20.54■□□□□ 0.88
SPIN3-242ENST00000640577 ESF1Q9H501 851 aaKnown RBP20.53■□□□□ 0.88
SPIN3-242ENST00000640577 MINK1Q8N4C8 1332 aaPredicted RBP20.52■□□□□ 0.88
SPIN3-242ENST00000640577 NRXN3Q9Y4C0 1643 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms