RNA–Protein interactions for RNA: ENST00000640554.1

SDHD-209, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 5

Gene SDHD, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-209ENST00000640554 RAB3GAP2Q9H2M9 1393 aa21.13■□□□□ 0.97
SDHD-209ENST00000640554 IQGAP1P46940 1657 aa21.13■□□□□ 0.97
SDHD-209ENST00000640554 TRPM2O94759 1503 aa21.12■□□□□ 0.97
SDHD-209ENST00000640554 CPS1P31327 1500 aa21.12■□□□□ 0.97
SDHD-209ENST00000640554 PLEKHG1Q9ULL1 1385 aa21.11■□□□□ 0.97
SDHD-209ENST00000640554 BCANQ96GW7 911 aa21.11■□□□□ 0.97
SDHD-209ENST00000640554 SPHKAPQ2M3C7 1700 aa21.09■□□□□ 0.97
SDHD-209ENST00000640554 ZNF326Q5BKZ1 582 aaKnown RBP21.09■□□□□ 0.97
SDHD-209ENST00000640554 TBX22Q9Y458 520 aa21.08■□□□□ 0.97
SDHD-209ENST00000640554 RPGRIP1LQ68CZ1 1315 aa21.07■□□□□ 0.96
SDHD-209ENST00000640554 KCNA6P17658 529 aa21.06■□□□□ 0.96
SDHD-209ENST00000640554 SLC26A8Q96RN1 970 aa21.06■□□□□ 0.96
SDHD-209ENST00000640554 VGFO15240 615 aaPredicted RBP21.04■□□□□ 0.96
SDHD-209ENST00000640554 FOXD1Q16676 465 aa21.04■□□□□ 0.96
SDHD-209ENST00000640554 CCDC144AA2RUR9 1427 aa21.04■□□□□ 0.96
SDHD-209ENST00000640554 CLTCL1P53675 1640 aa21■□□□□ 0.95
SDHD-209ENST00000640554 PIK3R4Q99570 1358 aa21■□□□□ 0.95
SDHD-209ENST00000640554 NUTM2DQ5VT03 806 aaPredicted RBP21■□□□□ 0.95
SDHD-209ENST00000640554 UBAP1LF5GYI3 381 aa20.99■□□□□ 0.95
SDHD-209ENST00000640554 TOM1O60784 492 aa20.99■□□□□ 0.95
SDHD-209ENST00000640554 MYO5BQ9ULV0 1848 aa20.97■□□□□ 0.95
SDHD-209ENST00000640554 LRRC7Q96NW7 1537 aa20.96■□□□□ 0.95
SDHD-209ENST00000640554 ADAMTS13Q76LX8 1427 aa20.95■□□□□ 0.95
SDHD-209ENST00000640554 DIP2AQ14689 1571 aa20.95■□□□□ 0.94
SDHD-209ENST00000640554 PROSER2Q86WR7 435 aaPredicted RBP20.95■□□□□ 0.94
SDHD-209ENST00000640554 KIF1BO60333 1816 aa20.94■□□□□ 0.94
SDHD-209ENST00000640554 ANKRD30BQ9BXX2 1392 aa20.92■□□□□ 0.94
SDHD-209ENST00000640554 SPATA31E1Q6ZUB1 1445 aa20.92■□□□□ 0.94
SDHD-209ENST00000640554 NKTRP30414 1462 aaKnown RBP20.92■□□□□ 0.94
SDHD-209ENST00000640554 NEXMIFQ5QGS0 1516 aa20.92■□□□□ 0.94
SDHD-209ENST00000640554 TRIM26Q12899 539 aaPredicted RBP20.91■□□□□ 0.94
SDHD-209ENST00000640554 RGL3Q3MIN7 710 aa20.91■□□□□ 0.94
SDHD-209ENST00000640554 SENP3Q9H4L4 574 aaPredicted RBP20.91■□□□□ 0.94
SDHD-209ENST00000640554 SETBP1Q9Y6X0 1596 aa20.9■□□□□ 0.94
SDHD-209ENST00000640554 NCOA3Q9Y6Q9 1424 aa20.89■□□□□ 0.94
SDHD-209ENST00000640554 TMEM94Q12767 1356 aa20.89■□□□□ 0.93
SDHD-209ENST00000640554 AMOTL2Q9Y2J4 779 aa20.88■□□□□ 0.93
SDHD-209ENST00000640554 NWD1Q149M9 1564 aa20.88■□□□□ 0.93
SDHD-209ENST00000640554 STAC3Q96MF2 364 aa20.87■□□□□ 0.93
SDHD-209ENST00000640554 STRCP1A6NGW2 1772 aa20.87■□□□□ 0.93
SDHD-209ENST00000640554 CHD2O14647 1828 aaKnown RBP20.82■□□□□ 0.92
SDHD-209ENST00000640554 METP08581 1390 aa20.82■□□□□ 0.92
SDHD-209ENST00000640554 MSH6P52701 1360 aa20.82■□□□□ 0.92
SDHD-209ENST00000640554 PIP4K2BP78356 416 aa20.81■□□□□ 0.92
SDHD-209ENST00000640554 ADGRF5Q8IZF2 1346 aa20.8■□□□□ 0.92
SDHD-209ENST00000640554 C19orf44Q9H6X5 657 aa20.8■□□□□ 0.92
SDHD-209ENST00000640554 SCAF1Q9H7N4 1312 aaKnown RBP20.79■□□□□ 0.92
SDHD-209ENST00000640554 PTPRUQ92729 1446 aa20.79■□□□□ 0.92
SDHD-209ENST00000640554 NRXN3Q9Y4C0 1643 aa20.79■□□□□ 0.92
SDHD-209ENST00000640554 C14orf37Q86TY3 774 aa20.79■□□□□ 0.92
SDHD-209ENST00000640554 PPLO60437 1756 aa20.77■□□□□ 0.91
SDHD-209ENST00000640554 ALKQ9UM73 1620 aa20.76■□□□□ 0.91
SDHD-209ENST00000640554 CADPS2Q86UW7 1296 aa20.76■□□□□ 0.91
SDHD-209ENST00000640554 RBM33Q96EV2 1170 aaKnown RBP20.76■□□□□ 0.91
SDHD-209ENST00000640554 C14orf93Q9H972 538 aaKnown RBP20.75■□□□□ 0.91
SDHD-209ENST00000640554 ATF3P18847 181 aa20.74■□□□□ 0.91
SDHD-209ENST00000640554 FAM135BQ49AJ0 1406 aa20.74■□□□□ 0.91
SDHD-209ENST00000640554 SLAIN2Q9P270 581 aa20.74■□□□□ 0.91
SDHD-209ENST00000640554 MYOM2P54296 1465 aa20.74■□□□□ 0.91
SDHD-209ENST00000640554 PIK3C2GO75747 1445 aa20.73■□□□□ 0.91
SDHD-209ENST00000640554 PRAG1Q86YV5 1406 aa20.73■□□□□ 0.91
SDHD-209ENST00000640554 DCAF11Q8TEB1 546 aa20.72■□□□□ 0.91
SDHD-209ENST00000640554 PTCH1Q13635 1447 aa20.71■□□□□ 0.91
SDHD-209ENST00000640554 NRXN1Q9ULB1 1477 aa20.71■□□□□ 0.91
SDHD-209ENST00000640554 XRN1Q8IZH2 1706 aaKnown RBP20.7■□□□□ 0.9
SDHD-209ENST00000640554 DCCP43146 1447 aa20.7■□□□□ 0.9
SDHD-209ENST00000640554 XIRP1Q702N8 1843 aaKnown RBP20.69■□□□□ 0.9
SDHD-209ENST00000640554 HSPA1LP34931 641 aa20.69■□□□□ 0.9
SDHD-209ENST00000640554 SIRT1Q96EB6 747 aa20.69■□□□□ 0.9
SDHD-209ENST00000640554 LRPPRCP42704 1394 aaKnown RBP20.69■□□□□ 0.9
SDHD-209ENST00000640554 ABCC11Q96J66 1382 aa20.69■□□□□ 0.9
SDHD-209ENST00000640554 KDM2AQ9Y2K7 1162 aa20.68■□□□□ 0.9
SDHD-209ENST00000640554 IFT172Q9UG01 1749 aa20.67■□□□□ 0.9
SDHD-209ENST00000640554 DHX57Q6P158 1386 aaKnown RBP20.67■□□□□ 0.9
SDHD-209ENST00000640554 CFAP70Q5T0N1 1121 aa20.66■□□□□ 0.9
SDHD-209ENST00000640554 TECPR2O15040 1411 aa20.65■□□□□ 0.9
SDHD-209ENST00000640554 ROBO2Q9HCK4 1378 aa20.65■□□□□ 0.9
SDHD-209ENST00000640554 TMEM132EQ6IEE7 984 aa20.65■□□□□ 0.9
SDHD-209ENST00000640554 ADGRL3Q9HAR2 1447 aa20.64■□□□□ 0.89
SDHD-209ENST00000640554 STK26Q9P289 416 aa20.64■□□□□ 0.89
SDHD-209ENST00000640554 SETD1AO15047 1707 aaKnown RBP20.64■□□□□ 0.89
SDHD-209ENST00000640554 YTHDC2Q9H6S0 1430 aaKnown RBP20.62■□□□□ 0.89
SDHD-209ENST00000640554 LAMC1P11047 1609 aa20.6■□□□□ 0.89
SDHD-209ENST00000640554 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.58■□□□□ 0.89
SDHD-209ENST00000640554 WAPLQ7Z5K2 1190 aa20.56■□□□□ 0.88
SDHD-209ENST00000640554 SIN3AQ96ST3 1273 aa20.56■□□□□ 0.88
SDHD-209ENST00000640554 ASXL1Q8IXJ9 1541 aa20.55■□□□□ 0.88
SDHD-209ENST00000640554 L3MBTL2Q969R5 705 aa20.55■□□□□ 0.88
SDHD-209ENST00000640554 MST1RQ04912 1400 aa20.54■□□□□ 0.88
SDHD-209ENST00000640554 NEUROD1Q13562 356 aa20.54■□□□□ 0.88
SDHD-209ENST00000640554 BRINP3Q76B58 766 aa20.54■□□□□ 0.88
SDHD-209ENST00000640554 POGKQ9P215 609 aa20.53■□□□□ 0.88
SDHD-209ENST00000640554 ROBO1Q9Y6N7 1651 aa20.52■□□□□ 0.88
SDHD-209ENST00000640554 PRAM1Q96QH2 718 aa20.51■□□□□ 0.87
SDHD-209ENST00000640554 DLC1Q96QB1 1528 aa20.51■□□□□ 0.87
SDHD-209ENST00000640554 ADGRB1O14514 1584 aa20.51■□□□□ 0.87
SDHD-209ENST00000640554 TRAK1Q9UPV9 953 aa20.5■□□□□ 0.87
SDHD-209ENST00000640554 KNDC1Q76NI1 1749 aa20.5■□□□□ 0.87
SDHD-209ENST00000640554 C1orf167Q5SNV9 1468 aa20.5■□□□□ 0.87
SDHD-209ENST00000640554 PLEKHH1Q9ULM0 1364 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms