RNA–Protein interactions for RNA: ENST00000640521.1

MED17-227, Transcript of mediator complex subunit 17, human

TSL 5 BASIC

Gene MED17, Length 2,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MED17-227	ENST00000640521	YEATS2	Q9ULM3	1422 aa		32.21	■■■□□ 2.75
MED17-227	ENST00000640521	ADGRF5	Q8IZF2	1346 aa		32.2	■■■□□ 2.75
MED17-227	ENST00000640521	ZBED9	Q6R2W3	1325 aa		32.2	■■■□□ 2.74
MED17-227	ENST00000640521	FAM69C	Q0P6D2	419 aa		32.19	■■■□□ 2.74
MED17-227	ENST00000640521	FKBP8	Q14318	412 aa		32.19	■■■□□ 2.74
MED17-227	ENST00000640521	MYBBP1A	Q9BQG0	1328 aa	Known RBP	32.18	■■■□□ 2.74
MED17-227	ENST00000640521	SIGLEC1	Q9BZZ2	1709 aa		32.18	■■■□□ 2.74
MED17-227	ENST00000640521	ZMYM4	Q5VZL5	1548 aa		32.17	■■■□□ 2.74
MED17-227	ENST00000640521	ZC3H13	Q5T200	1668 aa	Known RBP	32.16	■■■□□ 2.74
MED17-227	ENST00000640521	NOS1	P29475	1434 aa		32.16	■■■□□ 2.74
MED17-227	ENST00000640521	PARD3	Q8TEW0	1356 aa		32.16	■■■□□ 2.74
MED17-227	ENST00000640521	BRD4	O60885	1362 aa	Predicted RBP	32.15	■■■□□ 2.74
MED17-227	ENST00000640521	CFAP70	Q5T0N1	1121 aa		32.15	■■■□□ 2.74
MED17-227	ENST00000640521	PPL	O60437	1756 aa		32.14	■■■□□ 2.74
MED17-227	ENST00000640521	PNISR	Q8TF01	805 aa	Known RBP	32.14	■■■□□ 2.74
MED17-227	ENST00000640521	EIF3A	Q14152	1382 aa	Known RBP	32.13	■■■□□ 2.73
MED17-227	ENST00000640521	NEFL	P07196	543 aa		32.13	■■■□□ 2.73
MED17-227	ENST00000640521	TMC1	Q8TDI8	760 aa		32.13	■■■□□ 2.73
MED17-227	ENST00000640521	PANK3	Q9H999	370 aa		32.12	■■■□□ 2.73
MED17-227	ENST00000640521	ARHGAP31	Q2M1Z3	1444 aa		32.12	■■■□□ 2.73
MED17-227	ENST00000640521	PIK3C2B	O00750	1634 aa		32.12	■■■□□ 2.73
MED17-227	ENST00000640521	SYNM	O15061	1565 aa		32.1	■■■□□ 2.73
MED17-227	ENST00000640521	TSPOAP1	O95153	1857 aa		32.09	■■■□□ 2.73
MED17-227	ENST00000640521	CHGA	P10645	457 aa	Known RBP	32.09	■■■□□ 2.73
MED17-227	ENST00000640521	CDCA8	Q53HL2	280 aa		32.07	■■■□□ 2.72
MED17-227	ENST00000640521	SETBP1	Q9Y6X0	1596 aa		32.06	■■■□□ 2.72
MED17-227	ENST00000640521	RPGRIP1L	Q68CZ1	1315 aa		32.06	■■■□□ 2.72
MED17-227	ENST00000640521	LRPPRC	P42704	1394 aa	Known RBP	32.05	■■■□□ 2.72
MED17-227	ENST00000640521	PIK3C2G	O75747	1445 aa		32.03	■■■□□ 2.72
MED17-227	ENST00000640521	NLRP13	Q86W25	1043 aa		32.02	■■■□□ 2.72
MED17-227	ENST00000640521	MYO3A	Q8NEV4	1616 aa		32.02	■■■□□ 2.72
MED17-227	ENST00000640521	MYOM1	P52179	1685 aa		32.01	■■■□□ 2.71
MED17-227	ENST00000640521	KDM5A	P29375	1690 aa	Known RBP	32	■■■□□ 2.71
MED17-227	ENST00000640521	BCAN	Q96GW7	911 aa		31.99	■■■□□ 2.71
MED17-227	ENST00000640521	SLC24A1	O60721	1099 aa		31.98	■■■□□ 2.71
MED17-227	ENST00000640521	C14orf93	Q9H972	538 aa	Known RBP	31.97	■■■□□ 2.71
MED17-227	ENST00000640521	RERE	Q9P2R6	1566 aa		31.97	■■■□□ 2.71
MED17-227	ENST00000640521	CC2D1B	Q5T0F9	858 aa	Known RBP	31.97	■■■□□ 2.71
MED17-227	ENST00000640521	ERVK-7	P63135	1459 aa		31.95	■■■□□ 2.71
MED17-227	ENST00000640521	PREX1	Q8TCU6	1659 aa		31.95	■■■□□ 2.7
MED17-227	ENST00000640521	ADGRB1	O14514	1584 aa		31.94	■■■□□ 2.7
MED17-227	ENST00000640521	NEXMIF	Q5QGS0	1516 aa		31.94	■■■□□ 2.7
MED17-227	ENST00000640521	SBNO2	Q9Y2G9	1366 aa		31.92	■■■□□ 2.7
MED17-227	ENST00000640521	AGL	P35573	1532 aa		31.91	■■■□□ 2.7
MED17-227	ENST00000640521	IDI1	Q13907	227 aa		31.9	■■■□□ 2.7
MED17-227	ENST00000640521	KIF13A	Q9H1H9	1805 aa		31.9	■■■□□ 2.7
MED17-227	ENST00000640521	SLC52A1	Q9NWF4	448 aa		31.9	■■■□□ 2.7
MED17-227	ENST00000640521	SMG6	Q86US8	1419 aa	Known RBP	31.89	■■■□□ 2.69
MED17-227	ENST00000640521	KNSTRN	Q9Y448	316 aa		31.88	■■■□□ 2.69
MED17-227	ENST00000640521	AMER1	Q5JTC6	1135 aa	Predicted RBP	31.86	■■■□□ 2.69
MED17-227	ENST00000640521	VGF	O15240	615 aa	Predicted RBP	31.85	■■■□□ 2.69
MED17-227	ENST00000640521	CENPJ	Q9HC77	1338 aa	Predicted RBP	31.85	■■■□□ 2.69
MED17-227	ENST00000640521	ASXL1	Q8IXJ9	1541 aa		31.85	■■■□□ 2.69
MED17-227	ENST00000640521	TMEM131L	A2VDJ0	1609 aa		31.84	■■■□□ 2.69
MED17-227	ENST00000640521	MYO5B	Q9ULV0	1848 aa		31.84	■■■□□ 2.69
MED17-227	ENST00000640521	ZFYVE9	O95405	1425 aa		31.82	■■■□□ 2.69
MED17-227	ENST00000640521	QRICH2	Q9H0J4	1663 aa		31.82	■■■□□ 2.68
MED17-227	ENST00000640521	TRAK1	Q9UPV9	953 aa		31.81	■■■□□ 2.68
MED17-227	ENST00000640521	NPC1L1	Q9UHC9	1359 aa		31.81	■■■□□ 2.68
MED17-227	ENST00000640521	PPP6R1	Q9UPN7	881 aa		31.8	■■■□□ 2.68
MED17-227	ENST00000640521	TMEM132E	Q6IEE7	984 aa		31.8	■■■□□ 2.68
MED17-227	ENST00000640521	NUDC	Q9Y266	331 aa		31.8	■■■□□ 2.68
MED17-227	ENST00000640521	INSR	P06213	1382 aa		31.79	■■■□□ 2.68
MED17-227	ENST00000640521	NUTM2D	Q5VT03	806 aa	Predicted RBP	31.78	■■■□□ 2.68
MED17-227	ENST00000640521	IRX6	P78412	446 aa	Predicted RBP	31.76	■■■□□ 2.67
MED17-227	ENST00000640521	CLTC	Q00610	1675 aa	Known RBP	31.76	■■■□□ 2.67
MED17-227	ENST00000640521	ERICH6B	Q5W0A0	696 aa		31.75	■■■□□ 2.67
MED17-227	ENST00000640521	FBXO31	Q5XUX0	539 aa	Predicted RBP	31.75	■■■□□ 2.67
MED17-227	ENST00000640521	ARHGEF40	Q8TER5	1519 aa		31.74	■■■□□ 2.67
MED17-227	ENST00000640521	PPP2R1A	P30153	589 aa		31.74	■■■□□ 2.67
MED17-227	ENST00000640521	ARHGEF28	Q8N1W1	1705 aa	Known RBP	31.73	■■■□□ 2.67
MED17-227	ENST00000640521	SENP3-EIF4A1	A0A087X0R7	540 aa		31.73	■■■□□ 2.67
MED17-227	ENST00000640521	BLM	P54132	1417 aa	Predicted RBP	31.72	■■■□□ 2.67
MED17-227	ENST00000640521	TSHZ2	Q9NRE2	1034 aa		31.69	■■■□□ 2.66
MED17-227	ENST00000640521	CARD14	Q9BXL6	1004 aa		31.68	■■■□□ 2.66
MED17-227	ENST00000640521	SPATA31D1	Q6ZQQ2	1576 aa		31.66	■■■□□ 2.66
MED17-227	ENST00000640521	RNF123	Q5XPI4	1314 aa		31.63	■■■□□ 2.65
MED17-227	ENST00000640521	PUS7	Q96PZ0	661 aa	Known RBP	31.6	■■■□□ 2.65
MED17-227	ENST00000640521	TULP4	Q9NRJ4	1543 aa		31.6	■■■□□ 2.65
MED17-227	ENST00000640521	PDE3B	Q13370	1112 aa		31.58	■■■□□ 2.65
MED17-227	ENST00000640521	MLEC	Q14165	292 aa		31.58	■■■□□ 2.65
MED17-227	ENST00000640521	PPP4R2	Q9NY27	417 aa		31.57	■■■□□ 2.64
MED17-227	ENST00000640521	ADAMTS8	Q9UP79	889 aa		31.57	■■■□□ 2.64
MED17-227	ENST00000640521	EVC2	Q86UK5	1308 aa		31.56	■■■□□ 2.64
MED17-227	ENST00000640521	SLC12A5	Q9H2X9	1139 aa		31.55	■■■□□ 2.64
MED17-227	ENST00000640521	A2ML1	A8K2U0	1454 aa		31.55	■■■□□ 2.64
MED17-227	ENST00000640521	SALL2	Q9Y467	1007 aa	Predicted RBP	31.54	■■■□□ 2.64
MED17-227	ENST00000640521	ALK	Q9UM73	1620 aa		31.54	■■■□□ 2.64
MED17-227	ENST00000640521	STAG3	Q9UJ98	1225 aa		31.53	■■■□□ 2.64
MED17-227	ENST00000640521	NSD3	Q9BZ95	1437 aa		31.53	■■■□□ 2.64
MED17-227	ENST00000640521	USP32	Q8NFA0	1604 aa		31.52	■■■□□ 2.64
MED17-227	ENST00000640521	PTPRM	P28827	1452 aa		31.52	■■■□□ 2.64
MED17-227	ENST00000640521	WDR43	Q15061	677 aa	Known RBP eCLIP	31.51	■■■□□ 2.64
MED17-227	ENST00000640521	YTHDC2	Q9H6S0	1430 aa	Known RBP	31.5	■■■□□ 2.63
MED17-227	ENST00000640521	STK26	Q9P289	416 aa		31.49	■■■□□ 2.63
MED17-227	ENST00000640521	SENP3	Q9H4L4	574 aa	Predicted RBP	31.48	■■■□□ 2.63
MED17-227	ENST00000640521	RIMS2	Q9UQ26	1411 aa		31.46	■■■□□ 2.63
MED17-227	ENST00000640521	ZMYM3	Q14202	1370 aa		31.46	■■■□□ 2.63
MED17-227	ENST00000640521	SAFB2	Q14151	953 aa	Known RBP eCLIP	31.43	■■■□□ 2.62
MED17-227	ENST00000640521	ANKRD36B	Q8N2N9	1353 aa		31.43	■■■□□ 2.62

Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms