RNA–Protein interactions for RNA: ENST00000640507.1

SPIN3-240, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,436 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-240ENST00000640507 LRRC7Q96NW7 1537 aa23.74■■□□□ 1.39
SPIN3-240ENST00000640507 PPP1R15AO75807 674 aaPredicted RBP23.73■■□□□ 1.39
SPIN3-240ENST00000640507 PLEKHG1Q9ULL1 1385 aa23.72■■□□□ 1.39
SPIN3-240ENST00000640507 KCNA6P17658 529 aa23.72■■□□□ 1.39
SPIN3-240ENST00000640507 STRCP1A6NGW2 1772 aa23.72■■□□□ 1.39
SPIN3-240ENST00000640507 SLC4A1APQ9BWU0 796 aaKnown RBP23.69■■□□□ 1.38
SPIN3-240ENST00000640507 NUTM2DQ5VT03 806 aaPredicted RBP23.67■■□□□ 1.38
SPIN3-240ENST00000640507 TBX22Q9Y458 520 aa23.67■■□□□ 1.38
SPIN3-240ENST00000640507 MYO5BQ9ULV0 1848 aa23.67■■□□□ 1.38
SPIN3-240ENST00000640507 PIP4K2BP78356 416 aa23.66■■□□□ 1.38
SPIN3-240ENST00000640507 SENP3Q9H4L4 574 aaPredicted RBP23.66■■□□□ 1.38
SPIN3-240ENST00000640507 SPHKAPQ2M3C7 1700 aa23.66■■□□□ 1.38
SPIN3-240ENST00000640507 SCAF1Q9H7N4 1312 aaKnown RBP23.63■■□□□ 1.37
SPIN3-240ENST00000640507 TRPM2O94759 1503 aa23.62■■□□□ 1.37
SPIN3-240ENST00000640507 ZNF326Q5BKZ1 582 aaKnown RBP23.62■■□□□ 1.37
SPIN3-240ENST00000640507 PROSER2Q86WR7 435 aaPredicted RBP23.62■■□□□ 1.37
SPIN3-240ENST00000640507 ACIN1Q9UKV3 1341 aaKnown RBP23.62■■□□□ 1.37
SPIN3-240ENST00000640507 TMEM94Q12767 1356 aa23.6■■□□□ 1.37
SPIN3-240ENST00000640507 ADAMTS13Q76LX8 1427 aa23.59■■□□□ 1.37
SPIN3-240ENST00000640507 MPHOSPH9Q99550 1183 aa23.59■■□□□ 1.37
SPIN3-240ENST00000640507 ALKQ9UM73 1620 aa23.58■■□□□ 1.37
SPIN3-240ENST00000640507 CLTCL1P53675 1640 aa23.57■■□□□ 1.36
SPIN3-240ENST00000640507 SETD5Q9C0A6 1442 aa23.57■■□□□ 1.36
SPIN3-240ENST00000640507 NKTRP30414 1462 aaKnown RBP23.57■■□□□ 1.36
SPIN3-240ENST00000640507 PIK3R4Q99570 1358 aa23.56■■□□□ 1.36
SPIN3-240ENST00000640507 NWD1Q149M9 1564 aa23.56■■□□□ 1.36
SPIN3-240ENST00000640507 HSPA1LP34931 641 aa23.56■■□□□ 1.36
SPIN3-240ENST00000640507 FOXD1Q16676 465 aa23.55■■□□□ 1.36
SPIN3-240ENST00000640507 RBM33Q96EV2 1170 aaKnown RBP23.55■■□□□ 1.36
SPIN3-240ENST00000640507 DIP2AQ14689 1571 aa23.53■■□□□ 1.36
SPIN3-240ENST00000640507 XIRP1Q702N8 1843 aaKnown RBP23.51■■□□□ 1.35
SPIN3-240ENST00000640507 RPGRIP1LQ68CZ1 1315 aa23.5■■□□□ 1.35
SPIN3-240ENST00000640507 CHD2O14647 1828 aaKnown RBP23.5■■□□□ 1.35
SPIN3-240ENST00000640507 VGFO15240 615 aaPredicted RBP23.5■■□□□ 1.35
SPIN3-240ENST00000640507 AMOTL2Q9Y2J4 779 aa23.5■■□□□ 1.35
SPIN3-240ENST00000640507 NEXMIFQ5QGS0 1516 aa23.49■■□□□ 1.35
SPIN3-240ENST00000640507 NCOA3Q9Y6Q9 1424 aa23.48■■□□□ 1.35
SPIN3-240ENST00000640507 KIF1BO60333 1816 aa23.48■■□□□ 1.35
SPIN3-240ENST00000640507 SETBP1Q9Y6X0 1596 aa23.47■■□□□ 1.35
SPIN3-240ENST00000640507 RAB3GAP2Q9H2M9 1393 aa23.47■■□□□ 1.35
SPIN3-240ENST00000640507 MSH6P52701 1360 aa23.46■■□□□ 1.35
SPIN3-240ENST00000640507 CCDC144AA2RUR9 1427 aa23.46■■□□□ 1.35
SPIN3-240ENST00000640507 PTPRUQ92729 1446 aa23.46■■□□□ 1.35
SPIN3-240ENST00000640507 FAM135BQ49AJ0 1406 aa23.45■■□□□ 1.34
SPIN3-240ENST00000640507 NRXN3Q9Y4C0 1643 aa23.44■■□□□ 1.34
SPIN3-240ENST00000640507 DISP3Q9P2K9 1392 aa23.44■■□□□ 1.34
SPIN3-240ENST00000640507 METP08581 1390 aa23.43■■□□□ 1.34
SPIN3-240ENST00000640507 HRCP23327 699 aa23.42■■□□□ 1.34
SPIN3-240ENST00000640507 C19orf44Q9H6X5 657 aa23.41■■□□□ 1.34
SPIN3-240ENST00000640507 SLAIN2Q9P270 581 aa23.41■■□□□ 1.34
SPIN3-240ENST00000640507 C14orf37Q86TY3 774 aa23.4■■□□□ 1.34
SPIN3-240ENST00000640507 RGL3Q3MIN7 710 aa23.39■■□□□ 1.33
SPIN3-240ENST00000640507 SPATA31E1Q6ZUB1 1445 aa23.38■■□□□ 1.33
SPIN3-240ENST00000640507 CADPS2Q86UW7 1296 aa23.36■■□□□ 1.33
SPIN3-240ENST00000640507 ATF3P18847 181 aa23.34■■□□□ 1.33
SPIN3-240ENST00000640507 ANKRD30BQ9BXX2 1392 aa23.33■■□□□ 1.33
SPIN3-240ENST00000640507 XRN1Q8IZH2 1706 aaKnown RBP23.33■■□□□ 1.32
SPIN3-240ENST00000640507 ADGRF5Q8IZF2 1346 aa23.32■■□□□ 1.32
SPIN3-240ENST00000640507 PPLO60437 1756 aa23.3■■□□□ 1.32
SPIN3-240ENST00000640507 ROBO1Q9Y6N7 1651 aa23.29■■□□□ 1.32
SPIN3-240ENST00000640507 DCCP43146 1447 aa23.27■■□□□ 1.32
SPIN3-240ENST00000640507 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.27■■□□□ 1.32
SPIN3-240ENST00000640507 ILDR2Q71H61 639 aa23.25■■□□□ 1.31
SPIN3-240ENST00000640507 PTCH1Q13635 1447 aa23.24■■□□□ 1.31
SPIN3-240ENST00000640507 PRAG1Q86YV5 1406 aa23.24■■□□□ 1.31
SPIN3-240ENST00000640507 SETD1AO15047 1707 aaKnown RBP23.24■■□□□ 1.31
SPIN3-240ENST00000640507 ROBO2Q9HCK4 1378 aa23.23■■□□□ 1.31
SPIN3-240ENST00000640507 MED1Q15648 1581 aaPredicted RBP23.23■■□□□ 1.31
SPIN3-240ENST00000640507 ADGRL3Q9HAR2 1447 aa23.22■■□□□ 1.31
SPIN3-240ENST00000640507 PIK3C2GO75747 1445 aa23.21■■□□□ 1.31
SPIN3-240ENST00000640507 IFT172Q9UG01 1749 aa23.19■■□□□ 1.3
SPIN3-240ENST00000640507 BRINP3Q76B58 766 aa23.19■■□□□ 1.3
SPIN3-240ENST00000640507 C14orf93Q9H972 538 aaKnown RBP23.18■■□□□ 1.3
SPIN3-240ENST00000640507 MST1RQ04912 1400 aa23.18■■□□□ 1.3
SPIN3-240ENST00000640507 TMEM132EQ6IEE7 984 aa23.17■■□□□ 1.3
SPIN3-240ENST00000640507 LRPPRCP42704 1394 aaKnown RBP23.16■■□□□ 1.3
SPIN3-240ENST00000640507 MYOM2P54296 1465 aa23.16■■□□□ 1.3
SPIN3-240ENST00000640507 NRXN1Q9ULB1 1477 aa23.16■■□□□ 1.3
SPIN3-240ENST00000640507 ABCC11Q96J66 1382 aa23.16■■□□□ 1.3
SPIN3-240ENST00000640507 STK26Q9P289 416 aa23.16■■□□□ 1.3
SPIN3-240ENST00000640507 PHF23Q9BUL5 403 aaPredicted RBP23.15■■□□□ 1.3
SPIN3-240ENST00000640507 JCADQ9P266 1359 aa23.14■■□□□ 1.29
SPIN3-240ENST00000640507 TECPR2O15040 1411 aa23.14■■□□□ 1.29
SPIN3-240ENST00000640507 CFAP70Q5T0N1 1121 aa23.13■■□□□ 1.29
SPIN3-240ENST00000640507 STAC3Q96MF2 364 aa23.13■■□□□ 1.29
SPIN3-240ENST00000640507 PHLPP1O60346 1717 aa23.13■■□□□ 1.29
SPIN3-240ENST00000640507 NALCNQ8IZF0 1738 aa23.11■■□□□ 1.29
SPIN3-240ENST00000640507 WAPLQ7Z5K2 1190 aa23.11■■□□□ 1.29
SPIN3-240ENST00000640507 SIRT1Q96EB6 747 aa23.11■■□□□ 1.29
SPIN3-240ENST00000640507 AHDC1Q5TGY3 1603 aaPredicted RBP23.11■■□□□ 1.29
SPIN3-240ENST00000640507 YTHDC2Q9H6S0 1430 aaKnown RBP23.1■■□□□ 1.29
SPIN3-240ENST00000640507 DCAF11Q8TEB1 546 aa23.1■■□□□ 1.29
SPIN3-240ENST00000640507 ASXL1Q8IXJ9 1541 aa23.1■■□□□ 1.29
SPIN3-240ENST00000640507 C1orf167Q5SNV9 1468 aa23.09■■□□□ 1.29
SPIN3-240ENST00000640507 KDM2AQ9Y2K7 1162 aa23.09■■□□□ 1.29
SPIN3-240ENST00000640507 COL16A1Q07092 1604 aaPredicted RBP23.09■■□□□ 1.29
SPIN3-240ENST00000640507 DHX57Q6P158 1386 aaKnown RBP23.09■■□□□ 1.29
SPIN3-240ENST00000640507 SOCS7O14512 581 aa23.06■■□□□ 1.28
SPIN3-240ENST00000640507 ORAI2Q96SN7 254 aa23.05■■□□□ 1.28
SPIN3-240ENST00000640507 SPATA31A6Q5VVP1 1343 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms