RNA–Protein interactions for RNA: ENST00000640187.1

SPIN3-237, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,543 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-237ENST00000640187 NUTM2DQ5VT03 806 aaPredicted RBP17.77■□□□□ 0.44
SPIN3-237ENST00000640187 SIGLEC1Q9BZZ2 1709 aa17.77■□□□□ 0.44
SPIN3-237ENST00000640187 CAMSAP1Q5T5Y3 1602 aa17.76■□□□□ 0.43
SPIN3-237ENST00000640187 NEURL4Q96JN8 1562 aa17.76■□□□□ 0.43
SPIN3-237ENST00000640187 PANK3Q9H999 370 aa17.75■□□□□ 0.43
SPIN3-237ENST00000640187 SCAF11Q99590 1463 aaKnown RBP17.75■□□□□ 0.43
SPIN3-237ENST00000640187 IQGAP1P46940 1657 aa17.75■□□□□ 0.43
SPIN3-237ENST00000640187 ADGRB3O60242 1522 aa17.74■□□□□ 0.43
SPIN3-237ENST00000640187 MYOM2P54296 1465 aa17.73■□□□□ 0.43
SPIN3-237ENST00000640187 IDI1Q13907 227 aa17.73■□□□□ 0.43
SPIN3-237ENST00000640187 SENP3-EIF4A1A0A087X0R7 540 aa17.73■□□□□ 0.43
SPIN3-237ENST00000640187 SENP3Q9H4L4 574 aaPredicted RBP17.73■□□□□ 0.43
SPIN3-237ENST00000640187 IFT172Q9UG01 1749 aa17.72■□□□□ 0.43
SPIN3-237ENST00000640187 FBXO31Q5XUX0 539 aaPredicted RBP17.72■□□□□ 0.43
SPIN3-237ENST00000640187 CC2D1BQ5T0F9 858 aaKnown RBP17.71■□□□□ 0.43
SPIN3-237ENST00000640187 SYNMO15061 1565 aa17.71■□□□□ 0.43
SPIN3-237ENST00000640187 ZMYM4Q5VZL5 1548 aa17.71■□□□□ 0.42
SPIN3-237ENST00000640187 TMEM132EQ6IEE7 984 aa17.7■□□□□ 0.42
SPIN3-237ENST00000640187 TMC1Q8TDI8 760 aa17.7■□□□□ 0.42
SPIN3-237ENST00000640187 BCANQ96GW7 911 aa17.7■□□□□ 0.42
SPIN3-237ENST00000640187 MLECQ14165 292 aa17.7■□□□□ 0.42
SPIN3-237ENST00000640187 NRXN1Q9ULB1 1477 aa17.69■□□□□ 0.42
SPIN3-237ENST00000640187 KIF13AQ9H1H9 1805 aa17.68■□□□□ 0.42
SPIN3-237ENST00000640187 RALBP1Q15311 655 aa17.68■□□□□ 0.42
SPIN3-237ENST00000640187 PNISRQ8TF01 805 aaKnown RBP17.68■□□□□ 0.42
SPIN3-237ENST00000640187 KIAA1210Q9ULL0 1709 aa17.68■□□□□ 0.42
SPIN3-237ENST00000640187 ARHGAP31Q2M1Z3 1444 aa17.68■□□□□ 0.42
SPIN3-237ENST00000640187 FKBP8Q14318 412 aa17.67■□□□□ 0.42
SPIN3-237ENST00000640187 TRAK1Q9UPV9 953 aa17.67■□□□□ 0.42
SPIN3-237ENST00000640187 MYBBP1AQ9BQG0 1328 aaKnown RBP17.67■□□□□ 0.42
SPIN3-237ENST00000640187 C14orf93Q9H972 538 aaKnown RBP17.67■□□□□ 0.42
SPIN3-237ENST00000640187 PPLO60437 1756 aa17.66■□□□□ 0.42
SPIN3-237ENST00000640187 KTN1Q86UP2 1357 aaKnown RBP17.66■□□□□ 0.42
SPIN3-237ENST00000640187 PIK3C2GO75747 1445 aa17.65■□□□□ 0.42
SPIN3-237ENST00000640187 RPGRIP1LQ68CZ1 1315 aa17.65■□□□□ 0.42
SPIN3-237ENST00000640187 EIF3AQ14152 1382 aaKnown RBP17.65■□□□□ 0.42
SPIN3-237ENST00000640187 PIK3C2BO00750 1634 aa17.65■□□□□ 0.42
SPIN3-237ENST00000640187 PARD3Q8TEW0 1356 aa17.64■□□□□ 0.41
SPIN3-237ENST00000640187 ZC3H13Q5T200 1668 aaKnown RBP17.63■□□□□ 0.41
SPIN3-237ENST00000640187 SLC52A1Q9NWF4 448 aa17.63■□□□□ 0.41
SPIN3-237ENST00000640187 ZBED9Q6R2W3 1325 aa17.62■□□□□ 0.41
SPIN3-237ENST00000640187 VGFO15240 615 aaPredicted RBP17.62■□□□□ 0.41
SPIN3-237ENST00000640187 CDCA8Q53HL2 280 aa17.62■□□□□ 0.41
SPIN3-237ENST00000640187 RBM19Q9Y4C8 960 aaKnown RBP17.61■□□□□ 0.41
SPIN3-237ENST00000640187 BRD4O60885 1362 aaPredicted RBP17.61■□□□□ 0.41
SPIN3-237ENST00000640187 PREX1Q8TCU6 1659 aa17.6■□□□□ 0.41
SPIN3-237ENST00000640187 NLRP13Q86W25 1043 aa17.6■□□□□ 0.41
SPIN3-237ENST00000640187 NEXMIFQ5QGS0 1516 aa17.6■□□□□ 0.41
SPIN3-237ENST00000640187 ERVK-7P63135 1459 aa17.59■□□□□ 0.41
SPIN3-237ENST00000640187 KNSTRNQ9Y448 316 aa17.59■□□□□ 0.41
SPIN3-237ENST00000640187 CENPJQ9HC77 1338 aaPredicted RBP17.59■□□□□ 0.41
SPIN3-237ENST00000640187 MYO5BQ9ULV0 1848 aa17.59■□□□□ 0.41
SPIN3-237ENST00000640187 ADGRB1O14514 1584 aa17.58■□□□□ 0.41
SPIN3-237ENST00000640187 AGLP35573 1532 aa17.57■□□□□ 0.4
SPIN3-237ENST00000640187 AMER1Q5JTC6 1135 aaPredicted RBP17.57■□□□□ 0.4
SPIN3-237ENST00000640187 SETBP1Q9Y6X0 1596 aa17.56■□□□□ 0.4
SPIN3-237ENST00000640187 NEFLP07196 543 aa17.56■□□□□ 0.4
SPIN3-237ENST00000640187 IRX6P78412 446 aaPredicted RBP17.56■□□□□ 0.4
SPIN3-237ENST00000640187 REREQ9P2R6 1566 aa17.56■□□□□ 0.4
SPIN3-237ENST00000640187 CLTCQ00610 1675 aaKnown RBP17.55■□□□□ 0.4
SPIN3-237ENST00000640187 LRPPRCP42704 1394 aaKnown RBP17.55■□□□□ 0.4
SPIN3-237ENST00000640187 STAG3Q9UJ98 1225 aa17.55■□□□□ 0.4
SPIN3-237ENST00000640187 TMEM131LA2VDJ0 1609 aa17.55■□□□□ 0.4
SPIN3-237ENST00000640187 STK26Q9P289 416 aa17.55■□□□□ 0.4
SPIN3-237ENST00000640187 MYOM1P52179 1685 aa17.55■□□□□ 0.4
SPIN3-237ENST00000640187 SAFB2Q14151 953 aaKnown RBP eCLIP17.54■□□□□ 0.4
SPIN3-237ENST00000640187 CARD14Q9BXL6 1004 aa17.54■□□□□ 0.4
SPIN3-237ENST00000640187 PPP6R1Q9UPN7 881 aa17.54■□□□□ 0.4
SPIN3-237ENST00000640187 KDM5AP29375 1690 aaKnown RBP17.53■□□□□ 0.4
SPIN3-237ENST00000640187 SALL2Q9Y467 1007 aaPredicted RBP17.52■□□□□ 0.4
SPIN3-237ENST00000640187 SLC24A1O60721 1099 aa17.51■□□□□ 0.39
SPIN3-237ENST00000640187 MYO3AQ8NEV4 1616 aa17.51■□□□□ 0.39
SPIN3-237ENST00000640187 ARHGEF40Q8TER5 1519 aa17.51■□□□□ 0.39
SPIN3-237ENST00000640187 SBNO2Q9Y2G9 1366 aa17.51■□□□□ 0.39
SPIN3-237ENST00000640187 SLC12A5Q9H2X9 1139 aa17.51■□□□□ 0.39
SPIN3-237ENST00000640187 PPP2R1AP30153 589 aa17.5■□□□□ 0.39
SPIN3-237ENST00000640187 ZFYVE9O95405 1425 aa17.49■□□□□ 0.39
SPIN3-237ENST00000640187 ESF1Q9H501 851 aaKnown RBP17.49■□□□□ 0.39
SPIN3-237ENST00000640187 QRICH2Q9H0J4 1663 aa17.48■□□□□ 0.39
SPIN3-237ENST00000640187 ZMYM3Q14202 1370 aa17.48■□□□□ 0.39
SPIN3-237ENST00000640187 ASXL1Q8IXJ9 1541 aa17.47■□□□□ 0.39
SPIN3-237ENST00000640187 CABP2Q9NPB3 220 aa17.45■□□□□ 0.38
SPIN3-237ENST00000640187 SPATA31D1Q6ZQQ2 1576 aa17.44■□□□□ 0.38
SPIN3-237ENST00000640187 A2ML1A8K2U0 1454 aa17.44■□□□□ 0.38
SPIN3-237ENST00000640187 ARHGEF28Q8N1W1 1705 aaKnown RBP17.44■□□□□ 0.38
SPIN3-237ENST00000640187 ADAMTS8Q9UP79 889 aa17.44■□□□□ 0.38
SPIN3-237ENST00000640187 TRHP20396 242 aaPredicted RBP17.43■□□□□ 0.38
SPIN3-237ENST00000640187 PRAM1Q96QH2 718 aa17.43■□□□□ 0.38
SPIN3-237ENST00000640187 NUDCQ9Y266 331 aa17.43■□□□□ 0.38
SPIN3-237ENST00000640187 SMG6Q86US8 1419 aaKnown RBP17.42■□□□□ 0.38
SPIN3-237ENST00000640187 MSH5O43196 834 aa17.42■□□□□ 0.38
SPIN3-237ENST00000640187 EVC2Q86UK5 1308 aa17.41■□□□□ 0.38
SPIN3-237ENST00000640187 MINK1Q8N4C8 1332 aaPredicted RBP17.41■□□□□ 0.38
SPIN3-237ENST00000640187 NPC1L1Q9UHC9 1359 aa17.41■□□□□ 0.38
SPIN3-237ENST00000640187 TULP4Q9NRJ4 1543 aa17.4■□□□□ 0.38
SPIN3-237ENST00000640187 ALKQ9UM73 1620 aa17.4■□□□□ 0.38
SPIN3-237ENST00000640187 YTHDC2Q9H6S0 1430 aaKnown RBP17.4■□□□□ 0.38
SPIN3-237ENST00000640187 RIMS2Q9UQ26 1411 aa17.4■□□□□ 0.38
SPIN3-237ENST00000640187 CEBPAP49715 358 aaPredicted RBP17.4■□□□□ 0.38
SPIN3-237ENST00000640187 NSD3Q9BZ95 1437 aa17.39■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms