RNA–Protein interactions for RNA: ENST00000639715.1

SCARB2-218, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-218ENST00000639715 SPAG9O60271 1321 aaKnown RBP7.17□□□□□ -1.26
SCARB2-218ENST00000639715 TNNT3P45378 269 aaPredicted RBP7.17□□□□□ -1.26
SCARB2-218ENST00000639715 IPO4Q8TEX9 1081 aaKnown RBP7.17□□□□□ -1.26
SCARB2-218ENST00000639715 BRD4O60885 1362 aaPredicted RBP7.17□□□□□ -1.26
SCARB2-218ENST00000639715 MTERF4Q7Z6M4 381 aaKnown RBP7.17□□□□□ -1.26
SCARB2-218ENST00000639715 POGKQ9P215 609 aa7.17□□□□□ -1.26
SCARB2-218ENST00000639715 NBPF8Q3BBV2 869 aa7.17□□□□□ -1.26
SCARB2-218ENST00000639715 BCORL1Q5H9F3 1711 aa7.16□□□□□ -1.26
SCARB2-218ENST00000639715 ANKRD30BQ9BXX2 1392 aa7.16□□□□□ -1.26
SCARB2-218ENST00000639715 GOLGA2Q08379 1002 aa7.16□□□□□ -1.26
SCARB2-218ENST00000639715 R3HCC1Q9Y3T6 440 aaKnown RBP7.16□□□□□ -1.26
SCARB2-218ENST00000639715 NGEFQ8N5V2 710 aa7.16□□□□□ -1.26
SCARB2-218ENST00000639715 BACH2Q9BYV9 841 aa7.16□□□□□ -1.26
SCARB2-218ENST00000639715 BRD2P25440 801 aaKnown RBP7.15□□□□□ -1.26
SCARB2-218ENST00000639715 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.15□□□□□ -1.26
SCARB2-218ENST00000639715 RRP1P56182 461 aaKnown RBP7.15□□□□□ -1.26
SCARB2-218ENST00000639715 MORC1Q86VD1 984 aa7.15□□□□□ -1.26
SCARB2-218ENST00000639715 PANK3Q9H999 370 aa7.15□□□□□ -1.26
SCARB2-218ENST00000639715 ZBTB7CA1YPR0 619 aa7.15□□□□□ -1.27
SCARB2-218ENST00000639715 E9PSI1 815 aa7.15□□□□□ -1.27
SCARB2-218ENST00000639715 ZNF771Q7L3S4 317 aaPredicted RBP7.15□□□□□ -1.27
SCARB2-218ENST00000639715 SPRYD3Q8NCJ5 442 aa7.15□□□□□ -1.27
SCARB2-218ENST00000639715 CHMP4AQ9BY43 222 aa7.15□□□□□ -1.27
SCARB2-218ENST00000639715 PTMSP20962 102 aa7.15□□□□□ -1.27
SCARB2-218ENST00000639715 MAPK8IP3Q9UPT6 1336 aa7.15□□□□□ -1.27
SCARB2-218ENST00000639715 FTSJ3Q8IY81 847 aaKnown RBP7.14□□□□□ -1.27
SCARB2-218ENST00000639715 GRIN2AQ12879 1464 aa7.14□□□□□ -1.27
SCARB2-218ENST00000639715 CDK13Q14004 1512 aaKnown RBP7.14□□□□□ -1.27
SCARB2-218ENST00000639715 PRG4Q92954 1404 aaPredicted RBP7.14□□□□□ -1.27
SCARB2-218ENST00000639715 AEBP1Q8IUX7 1158 aa7.14□□□□□ -1.27
SCARB2-218ENST00000639715 ABCC5O15440 1437 aa7.13□□□□□ -1.27
SCARB2-218ENST00000639715 MRE11P49959 708 aa7.13□□□□□ -1.27
SCARB2-218ENST00000639715 NEUROD2Q15784 382 aa7.13□□□□□ -1.27
SCARB2-218ENST00000639715 C9orf84Q5VXU9 1444 aa7.13□□□□□ -1.27
SCARB2-218ENST00000639715 CTTNBP2Q8WZ74 1663 aa7.13□□□□□ -1.27
SCARB2-218ENST00000639715 KIF3BO15066 747 aa7.13□□□□□ -1.27
SCARB2-218ENST00000639715 PTMAP06454 111 aaKnown RBP7.13□□□□□ -1.27
SCARB2-218ENST00000639715 MAGI3Q5TCQ9 1506 aa7.13□□□□□ -1.27
SCARB2-218ENST00000639715 UGGT2Q9NYU1 1516 aa7.13□□□□□ -1.27
SCARB2-218ENST00000639715 RPRD2Q5VT52 1461 aaKnown RBP7.13□□□□□ -1.27
SCARB2-218ENST00000639715 SMAP1Q8IYB5 467 aaPredicted RBP7.13□□□□□ -1.27
SCARB2-218ENST00000639715 PLB1Q6P1J6 1458 aa7.12□□□□□ -1.27
SCARB2-218ENST00000639715 NCOA1Q15788 1441 aa7.12□□□□□ -1.27
SCARB2-218ENST00000639715 SMG6Q86US8 1419 aaKnown RBP7.12□□□□□ -1.27
SCARB2-218ENST00000639715 PTPRKQ15262 1439 aa7.12□□□□□ -1.27
SCARB2-218ENST00000639715 NCBP3Q53F19 620 aaKnown RBP7.12□□□□□ -1.27
SCARB2-218ENST00000639715 PNISRQ8TF01 805 aaKnown RBP7.12□□□□□ -1.27
SCARB2-218ENST00000639715 PLEKHH2Q8IVE3 1493 aa7.12□□□□□ -1.27
SCARB2-218ENST00000639715 IRX3P78415 501 aaPredicted RBP7.11□□□□□ -1.27
SCARB2-218ENST00000639715 EXOC6Q8TAG9 804 aa7.11□□□□□ -1.27
SCARB2-218ENST00000639715 CGNQ9P2M7 1197 aaKnown RBP7.11□□□□□ -1.27
SCARB2-218ENST00000639715 TCOF1Q13428 1488 aaKnown RBP7.11□□□□□ -1.27
SCARB2-218ENST00000639715 PPP4R3BQ5MIZ7 849 aa7.11□□□□□ -1.27
SCARB2-218ENST00000639715 CENPQQ7L2Z9 268 aaPredicted RBP7.11□□□□□ -1.27
SCARB2-218ENST00000639715 PREX1Q8TCU6 1659 aa7.11□□□□□ -1.27
SCARB2-218ENST00000639715 ARAP3Q8WWN8 1544 aa7.11□□□□□ -1.27
SCARB2-218ENST00000639715 XRCC6P12956 609 aaKnown RBP eCLIP7.1□□□□□ -1.27
SCARB2-218ENST00000639715 PATL2C9JE40 543 aaKnown RBP7.1□□□□□ -1.27
SCARB2-218ENST00000639715 GTF2E1P29083 439 aaPredicted RBP7.1□□□□□ -1.27
SCARB2-218ENST00000639715 TAF3Q5VWG9 929 aa7.1□□□□□ -1.27
SCARB2-218ENST00000639715 CAMSAP2Q08AD1 1489 aa7.09□□□□□ -1.27
SCARB2-218ENST00000639715 PMFBP1Q8TBY8 1022 aa7.09□□□□□ -1.27
SCARB2-218ENST00000639715 ZFP91Q96JP5 570 aaPredicted RBP7.09□□□□□ -1.27
SCARB2-218ENST00000639715 UQCRHLA0A096LP55 91 aa7.09□□□□□ -1.27
SCARB2-218ENST00000639715 UQCRHP07919 91 aa7.09□□□□□ -1.27
SCARB2-218ENST00000639715 GGT6Q6P531 493 aa7.09□□□□□ -1.27
SCARB2-218ENST00000639715 RWDD1Q9H446 243 aaPredicted RBP7.09□□□□□ -1.27
SCARB2-218ENST00000639715 GOLGA6L22H0YM25 854 aa7.09□□□□□ -1.27
SCARB2-218ENST00000639715 U2SURPO15042 1029 aaKnown RBP7.09□□□□□ -1.27
SCARB2-218ENST00000639715 CCDC184Q52MB2 194 aa7.09□□□□□ -1.27
SCARB2-218ENST00000639715 PANK2Q9BZ23 570 aa7.09□□□□□ -1.27
SCARB2-218ENST00000639715 IPO8O15397 1037 aaKnown RBP7.08□□□□□ -1.28
SCARB2-218ENST00000639715 TTC37Q6PGP7 1564 aa7.08□□□□□ -1.28
SCARB2-218ENST00000639715 CBX1P83916 185 aa7.08□□□□□ -1.28
SCARB2-218ENST00000639715 SRPK2P78362 688 aaKnown RBP7.08□□□□□ -1.28
SCARB2-218ENST00000639715 FAM161AQ3B820 660 aa7.08□□□□□ -1.28
SCARB2-218ENST00000639715 CENPJQ9HC77 1338 aaPredicted RBP7.08□□□□□ -1.28
SCARB2-218ENST00000639715 PTPRTO14522 1441 aa7.08□□□□□ -1.28
SCARB2-218ENST00000639715 PRDM4Q9UKN5 801 aa7.08□□□□□ -1.28
SCARB2-218ENST00000639715 ARHGAP5Q13017 1502 aa7.08□□□□□ -1.28
SCARB2-218ENST00000639715 CGNL1Q0VF96 1302 aa7.08□□□□□ -1.28
SCARB2-218ENST00000639715 U2AF1L5P0DN76 240 aaPredicted RBP7.07□□□□□ -1.28
SCARB2-218ENST00000639715 U2AF1Q01081 240 aaKnown RBP eCLIP7.07□□□□□ -1.28
SCARB2-218ENST00000639715 HDGFL2Q7Z4V5 671 aaPredicted RBP7.07□□□□□ -1.28
SCARB2-218ENST00000639715 CRBNQ96SW2 442 aa7.07□□□□□ -1.28
SCARB2-218ENST00000639715 GRPEL1Q9HAV7 217 aa7.07□□□□□ -1.28
SCARB2-218ENST00000639715 ILDR2Q71H61 639 aa7.06□□□□□ -1.28
SCARB2-218ENST00000639715 HDGFP51858 240 aaKnown RBP7.06□□□□□ -1.28
SCARB2-218ENST00000639715 CFAP44Q96MT7 982 aa7.06□□□□□ -1.28
SCARB2-218ENST00000639715 TERF2IPQ9NYB0 399 aa7.06□□□□□ -1.28
SCARB2-218ENST00000639715 CCDC141Q6ZP82 1450 aa7.06□□□□□ -1.28
SCARB2-218ENST00000639715 TRAK2O60296 914 aa7.06□□□□□ -1.28
SCARB2-218ENST00000639715 CCDC146Q8IYE0 955 aa7.06□□□□□ -1.28
SCARB2-218ENST00000639715 CSPP1Q1MSJ5 1256 aa7.05□□□□□ -1.28
SCARB2-218ENST00000639715 VGFO15240 615 aaPredicted RBP7.05□□□□□ -1.28
SCARB2-218ENST00000639715 PLIN1O60240 522 aa7.05□□□□□ -1.28
SCARB2-218ENST00000639715 NBPF1Q3BBV0 1214 aa7.05□□□□□ -1.28
SCARB2-218ENST00000639715 LTBP4Q8N2S1 1624 aa7.05□□□□□ -1.28
SCARB2-218ENST00000639715 FER1L4A9Z1Z3 1794 aa7.05□□□□□ -1.28
SCARB2-218ENST00000639715 LETM1O95202 739 aaPredicted RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms