RNA–Protein interactions for RNA: ENST00000639071.1

NECAP1-215, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,578 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-215ENST00000639071 LAMC1P11047 1609 aa12.24□□□□□ -0.45
NECAP1-215ENST00000639071 DMRT2Q9Y5R5 561 aa12.24□□□□□ -0.45
NECAP1-215ENST00000639071 SLFN5Q08AF3 891 aa12.23□□□□□ -0.45
NECAP1-215ENST00000639071 BRPF3Q9ULD4 1205 aa12.23□□□□□ -0.45
NECAP1-215ENST00000639071 ZNF521Q96K83 1311 aa12.23□□□□□ -0.45
NECAP1-215ENST00000639071 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.23□□□□□ -0.45
NECAP1-215ENST00000639071 INSRP06213 1382 aa12.21□□□□□ -0.45
NECAP1-215ENST00000639071 AFAP1Q8N556 730 aa12.21□□□□□ -0.45
NECAP1-215ENST00000639071 MAST1Q9Y2H9 1570 aa12.21□□□□□ -0.45
NECAP1-215ENST00000639071 NEUROD2Q15784 382 aa12.21□□□□□ -0.46
NECAP1-215ENST00000639071 DUOX2Q9NRD8 1548 aa12.2□□□□□ -0.46
NECAP1-215ENST00000639071 TNNT2P45379 298 aaPredicted RBP12.2□□□□□ -0.46
NECAP1-215ENST00000639071 GSE1Q14687 1217 aa12.2□□□□□ -0.46
NECAP1-215ENST00000639071 FRAT1Q92837 279 aaPredicted RBP12.2□□□□□ -0.46
NECAP1-215ENST00000639071 RNF17Q9BXT8 1623 aaKnown RBP12.2□□□□□ -0.46
NECAP1-215ENST00000639071 IGHDP01880 384 aa12.19□□□□□ -0.46
NECAP1-215ENST00000639071 PLXNC1O60486 1568 aa12.19□□□□□ -0.46
NECAP1-215ENST00000639071 TRAPPC8Q9Y2L5 1435 aa12.19□□□□□ -0.46
NECAP1-215ENST00000639071 MADDQ8WXG6 1647 aa12.19□□□□□ -0.46
NECAP1-215ENST00000639071 FRAT2O75474 233 aaPredicted RBP12.19□□□□□ -0.46
NECAP1-215ENST00000639071 ERCC6L2Q5T890 1561 aa12.19□□□□□ -0.46
NECAP1-215ENST00000639071 CANXP27824 592 aaKnown RBP12.18□□□□□ -0.46
NECAP1-215ENST00000639071 CDCA8Q53HL2 280 aa12.18□□□□□ -0.46
NECAP1-215ENST00000639071 CFAP70Q5T0N1 1121 aa12.18□□□□□ -0.46
NECAP1-215ENST00000639071 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.18□□□□□ -0.46
NECAP1-215ENST00000639071 ASXL1Q8IXJ9 1541 aa12.18□□□□□ -0.46
NECAP1-215ENST00000639071 PANK1Q8TE04 598 aa12.18□□□□□ -0.46
NECAP1-215ENST00000639071 RRP7AQ9Y3A4 280 aaKnown RBP12.18□□□□□ -0.46
NECAP1-215ENST00000639071 EFCAB2Q5VUJ9 269 aa12.17□□□□□ -0.46
NECAP1-215ENST00000639071 COG6Q9Y2V7 657 aa12.17□□□□□ -0.46
NECAP1-215ENST00000639071 ATP10AO60312 1499 aa12.17□□□□□ -0.46
NECAP1-215ENST00000639071 SCAF11Q99590 1463 aaKnown RBP12.17□□□□□ -0.46
NECAP1-215ENST00000639071 IQGAP1P46940 1657 aa12.16□□□□□ -0.46
NECAP1-215ENST00000639071 CARD14Q9BXL6 1004 aa12.16□□□□□ -0.46
NECAP1-215ENST00000639071 SPAG9O60271 1321 aaKnown RBP12.16□□□□□ -0.46
NECAP1-215ENST00000639071 NKTRP30414 1462 aaKnown RBP12.16□□□□□ -0.46
NECAP1-215ENST00000639071 SEC24BO95487 1268 aa12.15□□□□□ -0.46
NECAP1-215ENST00000639071 SYNMO15061 1565 aa12.15□□□□□ -0.46
NECAP1-215ENST00000639071 TRMT2AQ8IZ69 625 aaKnown RBP12.15□□□□□ -0.47
NECAP1-215ENST00000639071 PIK3C2GO75747 1445 aa12.14□□□□□ -0.47
NECAP1-215ENST00000639071 BCL2L13Q9BXK5 485 aa12.14□□□□□ -0.47
NECAP1-215ENST00000639071 MYOM1P52179 1685 aa12.14□□□□□ -0.47
NECAP1-215ENST00000639071 E9PSI1 815 aa12.14□□□□□ -0.47
NECAP1-215ENST00000639071 CLTCL1P53675 1640 aa12.13□□□□□ -0.47
NECAP1-215ENST00000639071 TNNQ9UQP3 1299 aa12.13□□□□□ -0.47
NECAP1-215ENST00000639071 ADGRF5Q8IZF2 1346 aa12.13□□□□□ -0.47
NECAP1-215ENST00000639071 CHD1O14646 1710 aa12.13□□□□□ -0.47
NECAP1-215ENST00000639071 KIF3BO15066 747 aa12.13□□□□□ -0.47
NECAP1-215ENST00000639071 CENPJQ9HC77 1338 aaPredicted RBP12.13□□□□□ -0.47
NECAP1-215ENST00000639071 PLCH2O75038 1416 aa12.13□□□□□ -0.47
NECAP1-215ENST00000639071 UGGT1Q9NYU2 1555 aa12.12□□□□□ -0.47
NECAP1-215ENST00000639071 EIF3AQ14152 1382 aaKnown RBP12.12□□□□□ -0.47
NECAP1-215ENST00000639071 CHGAP10645 457 aaKnown RBP12.12□□□□□ -0.47
NECAP1-215ENST00000639071 SLKQ9H2G2 1235 aaPredicted RBP12.12□□□□□ -0.47
NECAP1-215ENST00000639071 SPHKAPQ2M3C7 1700 aa12.11□□□□□ -0.47
NECAP1-215ENST00000639071 WWC1Q8IX03 1113 aa12.11□□□□□ -0.47
NECAP1-215ENST00000639071 ABCC2Q92887 1545 aa12.11□□□□□ -0.47
NECAP1-215ENST00000639071 CLUAP1Q96AJ1 413 aa12.11□□□□□ -0.47
NECAP1-215ENST00000639071 SENP3Q9H4L4 574 aaPredicted RBP12.11□□□□□ -0.47
NECAP1-215ENST00000639071 TRPM2O94759 1503 aa12.1□□□□□ -0.47
NECAP1-215ENST00000639071 KDM5AP29375 1690 aaKnown RBP12.1□□□□□ -0.47
NECAP1-215ENST00000639071 CLASP1Q7Z460 1538 aa12.1□□□□□ -0.47
NECAP1-215ENST00000639071 USP19O94966 1318 aa12.09□□□□□ -0.47
NECAP1-215ENST00000639071 ABCC1P33527 1531 aa12.09□□□□□ -0.47
NECAP1-215ENST00000639071 ERVK-7P63135 1459 aa12.09□□□□□ -0.47
NECAP1-215ENST00000639071 SCAPERQ9BY12 1400 aa12.09□□□□□ -0.47
NECAP1-215ENST00000639071 CEP152O94986 1710 aa12.09□□□□□ -0.47
NECAP1-215ENST00000639071 TRAK1Q9UPV9 953 aa12.09□□□□□ -0.47
NECAP1-215ENST00000639071 SHROOM2Q13796 1616 aa12.08□□□□□ -0.48
NECAP1-215ENST00000639071 MORC1Q86VD1 984 aa12.08□□□□□ -0.48
NECAP1-215ENST00000639071 CGNL1Q0VF96 1302 aa12.08□□□□□ -0.48
NECAP1-215ENST00000639071 RLBP1P12271 317 aa12.08□□□□□ -0.48
NECAP1-215ENST00000639071 SLC12A5Q9H2X9 1139 aa12.08□□□□□ -0.48
NECAP1-215ENST00000639071 ARXQ96QS3 562 aa12.07□□□□□ -0.48
NECAP1-215ENST00000639071 SPRYD3Q8NCJ5 442 aa12.07□□□□□ -0.48
NECAP1-215ENST00000639071 NPC1L1Q9UHC9 1359 aa12.07□□□□□ -0.48
NECAP1-215ENST00000639071 PTPRTO14522 1441 aa12.06□□□□□ -0.48
NECAP1-215ENST00000639071 ZCCHC11Q5TAX3 1644 aaKnown RBP12.06□□□□□ -0.48
NECAP1-215ENST00000639071 PDE3AQ14432 1141 aa12.06□□□□□ -0.48
NECAP1-215ENST00000639071 TCP11L2Q8N4U5 519 aa12.06□□□□□ -0.48
NECAP1-215ENST00000639071 POGKQ9P215 609 aa12.06□□□□□ -0.48
NECAP1-215ENST00000639071 PCDHB15Q9Y5E8 787 aa12.06□□□□□ -0.48
NECAP1-215ENST00000639071 KANK1Q14678 1352 aa12.06□□□□□ -0.48
NECAP1-215ENST00000639071 TMEM132EQ6IEE7 984 aa12.05□□□□□ -0.48
NECAP1-215ENST00000639071 ZFYVE16Q7Z3T8 1539 aa12.05□□□□□ -0.48
NECAP1-215ENST00000639071 NSD3Q9BZ95 1437 aa12.05□□□□□ -0.48
NECAP1-215ENST00000639071 RARSP54136 660 aaKnown RBP12.05□□□□□ -0.48
NECAP1-215ENST00000639071 NUTM2DQ5VT03 806 aaPredicted RBP12.05□□□□□ -0.48
NECAP1-215ENST00000639071 ABCA6Q8N139 1617 aa12.04□□□□□ -0.48
NECAP1-215ENST00000639071 MAPK8IP3Q9UPT6 1336 aa12.04□□□□□ -0.48
NECAP1-215ENST00000639071 MTHFSP49914 203 aa12.03□□□□□ -0.48
NECAP1-215ENST00000639071 PDZRN3Q9UPQ7 1066 aa12.03□□□□□ -0.48
NECAP1-215ENST00000639071 RUNDC1Q96C34 613 aa12.02□□□□□ -0.48
NECAP1-215ENST00000639071 STAC3Q96MF2 364 aa12.02□□□□□ -0.49
NECAP1-215ENST00000639071 TET3O43151 1660 aa12.02□□□□□ -0.49
NECAP1-215ENST00000639071 BECN1Q14457 450 aa12.01□□□□□ -0.49
NECAP1-215ENST00000639071 POLR3AO14802 1390 aaPredicted RBP12.01□□□□□ -0.49
NECAP1-215ENST00000639071 MAP3K4Q9Y6R4 1608 aa12.01□□□□□ -0.49
NECAP1-215ENST00000639071 PRKCSHP14314 528 aaPredicted RBP12.01□□□□□ -0.49
NECAP1-215ENST00000639071 SAFB2Q14151 953 aaKnown RBP eCLIP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms