RNA–Protein interactions for RNA: ENST00000638939.1

PDE4D-229, Transcript of phosphodiesterase 4D, humanhuman

TSL 5 BASIC

Gene PDE4D, Length 375 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-229ENST00000638939 TOM1O60784 492 aa8.71□□□□□ -1.02
PDE4D-229ENST00000638939 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.7□□□□□ -1.02
PDE4D-229ENST00000638939 ROBO1Q9Y6N7 1651 aa8.69□□□□□ -1.02
PDE4D-229ENST00000638939 HSPA1LP34931 641 aa8.69□□□□□ -1.02
PDE4D-229ENST00000638939 NKTRP30414 1462 aaKnown RBP8.69□□□□□ -1.02
PDE4D-229ENST00000638939 RPRD2Q5VT52 1461 aaKnown RBP8.69□□□□□ -1.02
PDE4D-229ENST00000638939 KANK4Q5T7N3 995 aaPredicted RBP8.68□□□□□ -1.02
PDE4D-229ENST00000638939 TMEM131LA2VDJ0 1609 aa8.68□□□□□ -1.02
PDE4D-229ENST00000638939 E9PCH4 1651 aa8.67□□□□□ -1.02
PDE4D-229ENST00000638939 NOS1P29475 1434 aa8.67□□□□□ -1.02
PDE4D-229ENST00000638939 PIP4K2BP78356 416 aa8.67□□□□□ -1.02
PDE4D-229ENST00000638939 KANK1Q14678 1352 aa8.67□□□□□ -1.02
PDE4D-229ENST00000638939 IQGAP3Q86VI3 1631 aa8.67□□□□□ -1.02
PDE4D-229ENST00000638939 TMEM2Q9UHN6 1383 aa8.67□□□□□ -1.02
PDE4D-229ENST00000638939 DIP2AQ14689 1571 aa8.66□□□□□ -1.02
PDE4D-229ENST00000638939 ANKRD30AQ9BXX3 1397 aa8.66□□□□□ -1.02
PDE4D-229ENST00000638939 SETD1AO15047 1707 aaKnown RBP8.66□□□□□ -1.02
PDE4D-229ENST00000638939 PHLPP1O60346 1717 aa8.66□□□□□ -1.02
PDE4D-229ENST00000638939 FBXO3Q9UK99 471 aa8.65□□□□□ -1.02
PDE4D-229ENST00000638939 SPHKAPQ2M3C7 1700 aa8.64□□□□□ -1.03
PDE4D-229ENST00000638939 DCAF8L1A6NGE4 600 aa8.64□□□□□ -1.03
PDE4D-229ENST00000638939 LTKP29376 864 aa8.63□□□□□ -1.03
PDE4D-229ENST00000638939 ZFYVE9O95405 1425 aa8.63□□□□□ -1.03
PDE4D-229ENST00000638939 FAM135BQ49AJ0 1406 aa8.63□□□□□ -1.03
PDE4D-229ENST00000638939 SHPRHQ149N8 1683 aa8.62□□□□□ -1.03
PDE4D-229ENST00000638939 COL16A1Q07092 1604 aaPredicted RBP8.62□□□□□ -1.03
PDE4D-229ENST00000638939 RRP7BPQ9NSQ0 103 aa8.62□□□□□ -1.03
PDE4D-229ENST00000638939 EID1Q9Y6B2 187 aa8.62□□□□□ -1.03
PDE4D-229ENST00000638939 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.61□□□□□ -1.03
PDE4D-229ENST00000638939 LOC105371045A0A1W2PR82 267 aa8.61□□□□□ -1.03
PDE4D-229ENST00000638939 TXNDC2Q86VQ3 553 aa8.61□□□□□ -1.03
PDE4D-229ENST00000638939 ATF5Q9Y2D1 282 aaPredicted RBP8.61□□□□□ -1.03
PDE4D-229ENST00000638939 ANKRD50Q9ULJ7 1429 aa8.61□□□□□ -1.03
PDE4D-229ENST00000638939 XRN1Q8IZH2 1706 aaKnown RBP8.6□□□□□ -1.03
PDE4D-229ENST00000638939 TMEM94Q12767 1356 aa8.6□□□□□ -1.03
PDE4D-229ENST00000638939 AHDC1Q5TGY3 1603 aaPredicted RBP8.59□□□□□ -1.03
PDE4D-229ENST00000638939 NRXN3Q9Y4C0 1643 aa8.59□□□□□ -1.03
PDE4D-229ENST00000638939 PLEKHG1Q9ULL1 1385 aa8.59□□□□□ -1.03
PDE4D-229ENST00000638939 TRPM2O94759 1503 aa8.59□□□□□ -1.03
PDE4D-229ENST00000638939 KIF1BO60333 1816 aa8.58□□□□□ -1.04
PDE4D-229ENST00000638939 NHSL1Q5SYE7 1610 aa8.58□□□□□ -1.04
PDE4D-229ENST00000638939 SETBP1Q9Y6X0 1596 aa8.57□□□□□ -1.04
PDE4D-229ENST00000638939 NCOA3Q9Y6Q9 1424 aa8.57□□□□□ -1.04
PDE4D-229ENST00000638939 KCNA6P17658 529 aa8.57□□□□□ -1.04
PDE4D-229ENST00000638939 IDI1Q13907 227 aa8.57□□□□□ -1.04
PDE4D-229ENST00000638939 SLC52A1Q9NWF4 448 aa8.57□□□□□ -1.04
PDE4D-229ENST00000638939 STAG3Q9UJ98 1225 aa8.57□□□□□ -1.04
PDE4D-229ENST00000638939 MSH6P52701 1360 aa8.57□□□□□ -1.04
PDE4D-229ENST00000638939 ROCK1Q13464 1354 aa8.57□□□□□ -1.04
PDE4D-229ENST00000638939 RIMS2Q9UQ26 1411 aa8.56□□□□□ -1.04
PDE4D-229ENST00000638939 NALCNQ8IZF0 1738 aa8.56□□□□□ -1.04
PDE4D-229ENST00000638939 PIK3R4Q99570 1358 aa8.55□□□□□ -1.04
PDE4D-229ENST00000638939 ADAMTS13Q76LX8 1427 aa8.54□□□□□ -1.04
PDE4D-229ENST00000638939 CHIC2Q9UKJ5 165 aa8.54□□□□□ -1.04
PDE4D-229ENST00000638939 U3KPZ7 1027 aaPredicted RBP8.54□□□□□ -1.04
PDE4D-229ENST00000638939 LAMC1P11047 1609 aa8.54□□□□□ -1.04
PDE4D-229ENST00000638939 DCCP43146 1447 aa8.54□□□□□ -1.04
PDE4D-229ENST00000638939 SLC26A8Q96RN1 970 aa8.53□□□□□ -1.04
PDE4D-229ENST00000638939 RGS17Q9UGC6 210 aaPredicted RBP8.53□□□□□ -1.04
PDE4D-229ENST00000638939 CLTCL1P53675 1640 aa8.53□□□□□ -1.04
PDE4D-229ENST00000638939 PROSER2Q86WR7 435 aaPredicted RBP8.52□□□□□ -1.05
PDE4D-229ENST00000638939 NEXMIFQ5QGS0 1516 aa8.52□□□□□ -1.05
PDE4D-229ENST00000638939 LRP6O75581 1613 aa8.51□□□□□ -1.05
PDE4D-229ENST00000638939 JCADQ9P266 1359 aa8.51□□□□□ -1.05
PDE4D-229ENST00000638939 PPLO60437 1756 aa8.51□□□□□ -1.05
PDE4D-229ENST00000638939 ASXL1Q8IXJ9 1541 aa8.5□□□□□ -1.05
PDE4D-229ENST00000638939 FAM50AQ14320 339 aaKnown RBP8.5□□□□□ -1.05
PDE4D-229ENST00000638939 IFT172Q9UG01 1749 aa8.49□□□□□ -1.05
PDE4D-229ENST00000638939 MARF1Q9Y4F3 1742 aaKnown RBP8.49□□□□□ -1.05
PDE4D-229ENST00000638939 PPP1R15AO75807 674 aaPredicted RBP8.49□□□□□ -1.05
PDE4D-229ENST00000638939 HDGFP51858 240 aaKnown RBP8.49□□□□□ -1.05
PDE4D-229ENST00000638939 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.49□□□□□ -1.05
PDE4D-229ENST00000638939 TBX22Q9Y458 520 aa8.49□□□□□ -1.05
PDE4D-229ENST00000638939 SLAIN2Q9P270 581 aa8.48□□□□□ -1.05
PDE4D-229ENST00000638939 ZNF219Q9P2Y4 722 aaPredicted RBP8.48□□□□□ -1.05
PDE4D-229ENST00000638939 SPATA31A6Q5VVP1 1343 aa8.48□□□□□ -1.05
PDE4D-229ENST00000638939 PRAG1Q86YV5 1406 aa8.47□□□□□ -1.05
PDE4D-229ENST00000638939 PTPRUQ92729 1446 aa8.47□□□□□ -1.05
PDE4D-229ENST00000638939 RBM33Q96EV2 1170 aaKnown RBP8.47□□□□□ -1.05
PDE4D-229ENST00000638939 EP400Q96L91 3159 aa8.47□□□□□ -1.05
PDE4D-229ENST00000638939 COL22A1Q8NFW1 1626 aaPredicted RBP8.47□□□□□ -1.05
PDE4D-229ENST00000638939 KNDC1Q76NI1 1749 aa8.46□□□□□ -1.05
PDE4D-229ENST00000638939 CDK12Q9NYV4 1490 aaPredicted RBP8.46□□□□□ -1.05
PDE4D-229ENST00000638939 POTEAQ6S8J7 498 aa8.46□□□□□ -1.06
PDE4D-229ENST00000638939 CADPS2Q86UW7 1296 aa8.46□□□□□ -1.06
PDE4D-229ENST00000638939 BCANQ96GW7 911 aa8.46□□□□□ -1.06
PDE4D-229ENST00000638939 NUP155O75694 1391 aa8.46□□□□□ -1.06
PDE4D-229ENST00000638939 MST1RQ04912 1400 aa8.46□□□□□ -1.06
PDE4D-229ENST00000638939 PTCH1Q13635 1447 aa8.46□□□□□ -1.06
PDE4D-229ENST00000638939 SETD5Q9C0A6 1442 aa8.46□□□□□ -1.06
PDE4D-229ENST00000638939 ADGRL3Q9HAR2 1447 aa8.46□□□□□ -1.06
PDE4D-229ENST00000638939 CDC42BPGQ6DT37 1551 aa8.44□□□□□ -1.06
PDE4D-229ENST00000638939 C19orf44Q9H6X5 657 aa8.44□□□□□ -1.06
PDE4D-229ENST00000638939 RRBP1Q9P2E9 1410 aaKnown RBP8.44□□□□□ -1.06
PDE4D-229ENST00000638939 SPDYE4A6NLX3 237 aa8.43□□□□□ -1.06
PDE4D-229ENST00000638939 ATF3P18847 181 aa8.43□□□□□ -1.06
PDE4D-229ENST00000638939 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.43□□□□□ -1.06
PDE4D-229ENST00000638939 CHGAP10645 457 aaKnown RBP8.42□□□□□ -1.06
PDE4D-229ENST00000638939 C14orf37Q86TY3 774 aa8.42□□□□□ -1.06
PDE4D-229ENST00000638939 SRCAPQ6ZRS2 3230 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms